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pkg/55328: math/R fails to build
>Number: 55328
>Category: pkg
>Synopsis: math/R fails to build
>Confidential: no
>Severity: non-critical
>Priority: medium
>Responsible: pkg-manager
>State: open
>Class: sw-bug
>Submitter-Id: net
>Arrival-Date: Sun May 31 13:30:00 +0000 2020
>Originator: Jukka Ruohonen
>Release: NetBSD 9.0_STABLE
>Organization:
-
>Environment:
System: NetBSD kafka 9.0_STABLE NetBSD 9.0_STABLE (GENERIC_KASLR) #0: Sun May 31 12:08:44 EEST 2020
jruoho@kafka:/usr/obj/sys/arch/amd64/compile/GENERIC_KASLR amd64
Architecture: x86_64 Machine: amd64
>Description:
R-3.6.1 fails to build. The relevant trace is:
gmake[4]: Leaving directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src/library/tools'
gmake[4]: Entering directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src/library/tools'
installing 'sysdata.rda'
*** caught segfault ***
address 0x608, cause 'memory not mapped'
Traceback:
[...]
19: get(name, envir = asNamespace(pkg), inherits = FALSE)
20: tools:::sysdata2LazyLoadDB
An irrecoverable exception occurred. R is aborting now ...
[1] Done echo "tools:::sysdata2LazyLoadDB("./R/sysdata.... |
Segmentation fault (core dumped) R_DEFAULT_PACKAGES=NULL LC_ALL=C R_ENABLE_JIT=...
gmake[4]: *** [../../../share/make/basepkg.mk:151: sysdata] Error 139
gmake[4]: Leaving directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src/library/tools'
gmake[3]: *** [Makefile:36: all] Error 2
gmake[3]: Leaving directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src/library/tools'
gmake[2]: *** [Makefile:37: R] Error 1
gmake[2]: Leaving directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src/library'
gmake[1]: *** [Makefile:28: R] Error 1
gmake[1]: Leaving directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src'
gmake: *** [Makefile:61: R] Error 1
*** Error code 2
>How-To-Repeat:
Try to build the package.
>Fix:
NA
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