pkgsrc-Bugs archive

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index][Old Index]

pkg/55328: math/R fails to build



>Number:         55328
>Category:       pkg
>Synopsis:       math/R fails to build
>Confidential:   no
>Severity:       non-critical
>Priority:       medium
>Responsible:    pkg-manager
>State:          open
>Class:          sw-bug
>Submitter-Id:   net
>Arrival-Date:   Sun May 31 13:30:00 +0000 2020
>Originator:     Jukka Ruohonen
>Release:        NetBSD 9.0_STABLE
>Organization:
-
>Environment:
System: NetBSD kafka 9.0_STABLE NetBSD 9.0_STABLE (GENERIC_KASLR) #0: Sun May 31 12:08:44 EEST 2020
jruoho@kafka:/usr/obj/sys/arch/amd64/compile/GENERIC_KASLR amd64
Architecture: x86_64 Machine: amd64
>Description:
R-3.6.1 fails to build. The relevant trace is:

gmake[4]: Leaving directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src/library/tools'
gmake[4]: Entering directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src/library/tools'
installing 'sysdata.rda'

 *** caught segfault ***
address 0x608, cause 'memory not mapped'

Traceback:
[...]
19: get(name, envir = asNamespace(pkg), inherits = FALSE)
20: tools:::sysdata2LazyLoadDB
An irrecoverable exception occurred. R is aborting now ...
[1]   Done                    echo "tools:::sysdata2LazyLoadDB("./R/sysdata.... |
      Segmentation fault (core dumped) R_DEFAULT_PACKAGES=NULL LC_ALL=C R_ENABLE_JIT=...
gmake[4]: *** [../../../share/make/basepkg.mk:151: sysdata] Error 139
gmake[4]: Leaving directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src/library/tools'
gmake[3]: *** [Makefile:36: all] Error 2
gmake[3]: Leaving directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src/library/tools'
gmake[2]: *** [Makefile:37: R] Error 1
gmake[2]: Leaving directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src/library'
gmake[1]: *** [Makefile:28: R] Error 1
gmake[1]: Leaving directory '/tmp/pkgsrc/math/R/work/R-3.6.1/src'
gmake: *** [Makefile:61: R] Error 1
*** Error code 2

>How-To-Repeat:
Try to build the package.
>Fix:
NA



Home | Main Index | Thread Index | Old Index