Import py27-htseq-0.6.1p1 as wip/py-htseq.

[Jason Bacon <bacon4000%gmail.com@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon4000%gmail.com@localhost>
Pushed By:	outpaddling
Date:		Wed May 11 10:36:26 2016 -0500
Changeset:	13bea3c37aa44eaea7f2dbb797bda67c30ad7a2f

Added Files:
	py-htseq/DESCR
	py-htseq/Makefile
	py-htseq/PLIST
	py-htseq/TODO
	py-htseq/buildlink3.mk
	py-htseq/distinfo

Log Message:
Import py27-htseq-0.6.1p1 as wip/py-htseq.

HTSeq is a Python package that provides infrastructure to process data from
high-throughput sequencing assays.

WWW: http://pypi.python.org/pypi/HTSeq

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=13bea3c37aa44eaea7f2dbb797bda67c30ad7a2f

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 py-htseq/DESCR         |  4 ++++
 py-htseq/Makefile      | 29 +++++++++++++++++++++++++++++
 py-htseq/PLIST         | 30 ++++++++++++++++++++++++++++++
 py-htseq/TODO          |  1 +
 py-htseq/buildlink3.mk | 12 ++++++++++++
 py-htseq/distinfo      |  6 ++++++
 6 files changed, 82 insertions(+)

diffs:
diff --git a/py-htseq/DESCR b/py-htseq/DESCR
new file mode 100644
index 0000000..efe1c0e
--- /dev/null
+++ b/py-htseq/DESCR
@@ -0,0 +1,4 @@
+HTSeq is a Python package that provides infrastructure to process data from
+high-throughput sequencing assays.
+
+WWW: http://pypi.python.org/pypi/HTSeq
diff --git a/py-htseq/Makefile b/py-htseq/Makefile
new file mode 100644
index 0000000..6c53422
--- /dev/null
+++ b/py-htseq/Makefile
@@ -0,0 +1,29 @@
+# $NetBSD$
+
+###########################################################
+#               Generated by fbsd2pkg                     #
+###########################################################
+
+PKGNAME=	${PYPKGPREFIX}-htseq-${PORTVERSION}
+DISTNAME=	HTSeq-${PORTVERSION}
+CATEGORIES=	python
+MASTER_SITES=	${MASTER_SITE_CHEESESHOP}/source/H/HTSeq/
+
+MAINTAINER=	bacon4000%gmail.com@localhost
+
+COMMENT=	Framework to analyze data from high-throughput sequencing assays
+LICENSE=	gnu-gpl-v3
+
+# Just assuming C and C++: Adjust this!
+USE_LANGUAGES=	c c++
+PYDISTUTILSPKG=	yes
+
+PORTVERSION=	0.6.1p1
+MASTER_SITE_CHEESESHOP= http://pypi.python.org/packages
+
+FETCH_USING=	curl
+
+.include "../../lang/python/distutils.mk"
+.include "../../math/py-numpy/buildlink3.mk"
+.include "../../graphics/py-matplotlib/buildlink3.mk"
+.include "../../mk/bsd.pkg.mk"
diff --git a/py-htseq/PLIST b/py-htseq/PLIST
new file mode 100644
index 0000000..b4d73e9
--- /dev/null
+++ b/py-htseq/PLIST
@@ -0,0 +1,30 @@
+@comment $NetBSD$
+bin/htseq-count
+bin/htseq-qa
+${PYSITELIB}/${EGG_FILE}/dependency_links.txt
+${PYSITELIB}/${EGG_FILE}/PKG-INFO
+${PYSITELIB}/${EGG_FILE}/SOURCES.txt
+${PYSITELIB}/${EGG_FILE}/top_level.txt
+${PYSITELIB}/HTSeq/_HTSeq_internal.py
+${PYSITELIB}/HTSeq/_HTSeq_internal.pyc
+${PYSITELIB}/HTSeq/_HTSeq_internal.pyo
+${PYSITELIB}/HTSeq/_HTSeq.so
+${PYSITELIB}/HTSeq/__init__.py
+${PYSITELIB}/HTSeq/__init__.pyc
+${PYSITELIB}/HTSeq/__init__.pyo
+${PYSITELIB}/HTSeq/scripts/count.py
+${PYSITELIB}/HTSeq/scripts/count.pyc
+${PYSITELIB}/HTSeq/scripts/count.pyo
+${PYSITELIB}/HTSeq/scripts/__init__.py
+${PYSITELIB}/HTSeq/scripts/__init__.pyc
+${PYSITELIB}/HTSeq/scripts/__init__.pyo
+${PYSITELIB}/HTSeq/scripts/qa.py
+${PYSITELIB}/HTSeq/scripts/qa.pyc
+${PYSITELIB}/HTSeq/scripts/qa.pyo
+${PYSITELIB}/HTSeq/StepVector.py
+${PYSITELIB}/HTSeq/StepVector.pyc
+${PYSITELIB}/HTSeq/StepVector.pyo
+${PYSITELIB}/HTSeq/_StepVector.so
+${PYSITELIB}/HTSeq/_version.py
+${PYSITELIB}/HTSeq/_version.pyc
+${PYSITELIB}/HTSeq/_version.pyo
diff --git a/py-htseq/TODO b/py-htseq/TODO
new file mode 100644
index 0000000..b687356
--- /dev/null
+++ b/py-htseq/TODO
@@ -0,0 +1 @@
+Clean up and test
diff --git a/py-htseq/buildlink3.mk b/py-htseq/buildlink3.mk
new file mode 100644
index 0000000..5afb304
--- /dev/null
+++ b/py-htseq/buildlink3.mk
@@ -0,0 +1,12 @@
+# $NetBSD$
+
+BUILDLINK_TREE+=	HTSeq
+
+.if !defined(HTSEQ_BUILDLINK3_MK)
+HTSEQ_BUILDLINK3_MK:=
+
+BUILDLINK_API_DEPENDS.HTSeq+=	HTSeq>=0.6.1p1
+BUILDLINK_PKGSRCDIR.HTSeq?=	../../wip/py-htseq
+.endif	# HTSEQ_BUILDLINK3_MK
+
+BUILDLINK_TREE+=	-HTSeq
diff --git a/py-htseq/distinfo b/py-htseq/distinfo
new file mode 100644
index 0000000..6d5711c
--- /dev/null
+++ b/py-htseq/distinfo
@@ -0,0 +1,6 @@
+$NetBSD$
+
+SHA1 (HTSeq-0.6.1p1.tar.gz) = d328e34105ae739b85985e088e44d9e57ba0bd46
+RMD160 (HTSeq-0.6.1p1.tar.gz) = c4d1b8cb687c51ad95264d4fc109715502808f32
+SHA512 (HTSeq-0.6.1p1.tar.gz) = d71aead88eba7630636330376aebb91084fae1596215597845872b0ae79799d1eb48b1faba7d22e1d3dd7361f3ad9de4448b17e1d743326d94039119902ad89c
+Size (HTSeq-0.6.1p1.tar.gz) = 226234 bytes