py-cutadapt: Tolerate dnaio > 0.3

[Jason Bacon <bacon%NetBSD.org@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Thu Oct 10 15:21:22 2019 -0500
Changeset:	4806980a0ee38503f4d313c60afca0118f1db6f4

Modified Files:
	py-cutadapt/distinfo
Added Files:
	py-cutadapt/patches/patch-setup.py

Log Message:
py-cutadapt: Tolerate dnaio > 0.3

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=4806980a0ee38503f4d313c60afca0118f1db6f4

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 py-cutadapt/distinfo               |  1 +
 py-cutadapt/patches/patch-setup.py | 15 +++++++++++++++
 2 files changed, 16 insertions(+)

diffs:
diff --git a/py-cutadapt/distinfo b/py-cutadapt/distinfo
index 526724b8ec..af444fa587 100644
--- a/py-cutadapt/distinfo
+++ b/py-cutadapt/distinfo
@@ -4,3 +4,4 @@ SHA1 (cutadapt-2.5.tar.gz) = bc92e43825d5d10892b69cdbd21448f17353c477
 RMD160 (cutadapt-2.5.tar.gz) = dacb42583d0dea114b2bcf42ac7da9d2c79e3436
 SHA512 (cutadapt-2.5.tar.gz) = fa114dc4d8dfc03325c1bc8b41101aa1dfac7b3fbbf71d98bd3422cb054ae1b475e0cdc56519a49cba95e432d5fec3b8abe4f58b915ad487f335f0fd62994715
 Size (cutadapt-2.5.tar.gz) = 269321 bytes
+SHA1 (patch-setup.py) = c1ddc55533acc8c21d929c5fd61c7f755028f130
diff --git a/py-cutadapt/patches/patch-setup.py b/py-cutadapt/patches/patch-setup.py
new file mode 100644
index 0000000000..19e5c9705e
--- /dev/null
+++ b/py-cutadapt/patches/patch-setup.py
@@ -0,0 +1,15 @@
+$NetBSD$
+
+# Allow dnaio > 0.3
+
+--- setup.py.orig	2019-10-10 20:20:05.117582567 +0000
++++ setup.py
+@@ -102,7 +102,7 @@ setup(
+     package_dir={'': 'src'},
+     packages=find_packages('src'),
+     entry_points={'console_scripts': ['cutadapt = cutadapt.__main__:main']},
+-    install_requires=['dnaio~=0.3.0', 'xopen~=0.8.1'],
++    install_requires=['dnaio>=0.3.0', 'xopen>=0.8.1'],
+     extras_require={
+         'dev': ['Cython', 'pytest', 'pytest-timeout', 'sphinx', 'sphinx_issues'],
+     },