CVS commit: pkgsrc/biology/fastp

["Roland Illig" <rillig%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   rillig
Date:           Mon May 25 05:18:35 UTC 2020

Modified Files:
        pkgsrc/biology/fastp: Makefile

Log Message:
biology/fastp: document possible array[char] bug


To generate a diff of this commit:
cvs rdiff -u -r1.1 -r1.2 pkgsrc/biology/fastp/Makefile

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/fastp/Makefile
diff -u pkgsrc/biology/fastp/Makefile:1.1 pkgsrc/biology/fastp/Makefile:1.2
--- pkgsrc/biology/fastp/Makefile:1.1   Sat May  4 16:15:25 2019
+++ pkgsrc/biology/fastp/Makefile       Mon May 25 05:18:35 2020
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.1 2019/05/04 16:15:25 bacon Exp $
+# $NetBSD: Makefile,v 1.2 2020/05/25 05:18:35 rillig Exp $
 
 DISTNAME=      fastp-0.20.0
 CATEGORIES=    biology
@@ -15,6 +15,12 @@ USE_TOOLS+=          gmake
 BUILD_TARGET=          fastp
 PTHREAD_AUTO_VARS=     yes
 
+# src/stats.cpp: In member function 'void Stats::statRead(Read*)':
+# src/stats.cpp:248:29: error: array subscript has type 'char' [-Werror=char-subscripts]
+#              mCycleQ30Bases[b][i]++;
+# Maybe fix this later.
+BUILDLINK_TRANSFORM+=  rm:-Werror=char-subscripts
+
 post-install:
        ${STRIP} ${DESTDIR}${PREFIX}/bin/fastp