[pkgsrc/trunk]: pkgsrc/biology Deleting p5-BioPerl. Duplicate with bioperl. S...

[mef <mef%pkgsrc.org@localhost>]

details:   https://anonhg.NetBSD.org/pkgsrc/rev/e1374f6712dd
branches:  trunk
changeset: 362285:e1374f6712dd
user:      mef <mef%pkgsrc.org@localhost>
date:      Wed May 10 15:09:47 2017 +0000

description:
Deleting p5-BioPerl. Duplicate with bioperl. Sorry.

diffstat:

 biology/Makefile            |   3 +--
 biology/p5-BioPerl/DESCR    |   1 -
 biology/p5-BioPerl/Makefile |  28 ----------------------------
 biology/p5-BioPerl/distinfo |   6 ------
 4 files changed, 1 insertions(+), 37 deletions(-)

diffs (64 lines):

diff -r 458bfcfa1ae0 -r e1374f6712dd biology/Makefile
--- a/biology/Makefile  Wed May 10 15:02:38 2017 +0000
+++ b/biology/Makefile  Wed May 10 15:09:47 2017 +0000
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.41 2017/05/07 13:59:16 mef Exp $
+# $NetBSD: Makefile,v 1.42 2017/05/10 15:09:47 mef Exp $
 #
 
 COMMENT=       Software for the biological sciences
@@ -29,7 +29,6 @@
 SUBDIR+=       nut
 SUBDIR+=       openbabel
 SUBDIR+=       p5-Bio-ASN1-EntrezGene
-SUBDIR+=       p5-BioPerl
 SUBDIR+=       pdbalign
 SUBDIR+=       phylip
 SUBDIR+=       plink
diff -r 458bfcfa1ae0 -r e1374f6712dd biology/p5-BioPerl/DESCR
--- a/biology/p5-BioPerl/DESCR  Wed May 10 15:02:38 2017 +0000
+++ /dev/null   Thu Jan 01 00:00:00 1970 +0000
@@ -1,1 +0,0 @@
-Easy first time access to BioPerl via functions.
diff -r 458bfcfa1ae0 -r e1374f6712dd biology/p5-BioPerl/Makefile
--- a/biology/p5-BioPerl/Makefile       Wed May 10 15:02:38 2017 +0000
+++ /dev/null   Thu Jan 01 00:00:00 1970 +0000
@@ -1,28 +0,0 @@
-# $NetBSD: Makefile,v 1.2 2017/05/07 15:09:38 mef Exp $
-
-DISTNAME=      BioPerl-1.007001
-PKGNAME=       p5-${DISTNAME}
-CATEGORIES=    biology perl5
-MASTER_SITES=  http://search.cpan.org/CPAN/authors/id/C/CJ/CJFIELDS/
-
-MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
-HOMEPAGE=      http://search.cpan.org/~cjfields/BioPerl/Bio/Perl.pm
-COMMENT=       Functional access to BioPerl for people who don't know objects
-LICENSE=       ${PERL5_LICENSE}
-
-# for make test
-BUILD_DEPENDS+=        p5-Data-Stag-[0-9]*:../../devel/p5-Data-Stag
-BUILD_DEPENDS+=        p5-Test-Most-[0-9]*:../../devel/p5-Test-Most
-BUILD_DEPENDS+=        p5-Text-Diff-[0-9]*:../../textproc/p5-Text-Diff
-
-PERL5_MODULE_TYPE=     Module::Build
-PERL5_PACKLIST=                auto/Bio/.packlist
-USE_LANGUAGES=         # none
-
-REPLACE_PERL+= scripts/utilities/bp_find-blast-matches.pl
-REPLACE_PERL+= scripts/seq/bp_seqcut.pl
-REPLACE_PERL+= scripts/Bio-DB-SeqFeature-Store/bp_seqfeature_gff3.pl
-REPLACE_PERL+= scripts/seq/bp_seqpart.pl
-
-.include "../../lang/perl5/module.mk"
-.include "../../mk/bsd.pkg.mk"
diff -r 458bfcfa1ae0 -r e1374f6712dd biology/p5-BioPerl/distinfo
--- a/biology/p5-BioPerl/distinfo       Wed May 10 15:02:38 2017 +0000
+++ /dev/null   Thu Jan 01 00:00:00 1970 +0000
@@ -1,6 +0,0 @@
-$NetBSD: distinfo,v 1.1 2017/05/07 13:57:12 mef Exp $
-
-SHA1 (BioPerl-1.007001.tar.gz) = 13a3e7a30d68ee32d735921668839eda668771f4
-RMD160 (BioPerl-1.007001.tar.gz) = c433044f47f5827f480836329487bf5780c9f480
-SHA512 (BioPerl-1.007001.tar.gz) = 6ab6af9d8fa74a299870273f2843872af099764997aa1b03f88248502f9ed1b74f4f577b67befa1ae8c18ee2640c029a08a403e2dec5b1cdea41f2b86c82c11b
-Size (BioPerl-1.007001.tar.gz) = 12486953 bytes