pkg/28483: biology/hmmer is out of date

[dprice%cs.nmsu.edu@localhost]

>Number:         28483
>Category:       pkg
>Synopsis:       biology/hmmer is out of date
>Confidential:   no
>Severity:       non-critical
>Priority:       low
>Responsible:    pkg-manager
>State:          open
>Class:          change-request
>Submitter-Id:   net
>Arrival-Date:   Tue Nov 30 21:15:01 +0000 2004
>Originator:     David Price
>Release:        1.6.1
>Organization:
NMSU
>Environment:
NetBSD stachys.nmsu.edu 1.6.1 NetBSD 1.6.1 (BRIN_LAPTOP) #0: Mon Jun 16 
17:13:59 MDT 2003   
root%viola.nmsu.edu@localhost:/usr/src-1.6.1/sys/arch/i386/compile/BRIN_LAPTOP 
i386
>Description:
The biology/hmmer package has newer distfiles, we recieved a request to update 
the package.  
>How-To-Repeat:

>Fix:
Apply this patch:
diff -bur hmmer.orig/Makefile hmmer/Makefile
--- hmmer.orig/Makefile Tue Nov 30 13:46:29 2004
+++ hmmer/Makefile      Tue Nov 30 13:46:50 2004
@@ -1,15 +1,15 @@
 # $NetBSD: Makefile,v 1.5 2004/08/16 02:47:49 ben Exp $
 #

-DISTNAME=              hmmer-2.3.1
+DISTNAME=              hmmer-2.3.2
 CATEGORIES=            biology
-MASTER_SITES=          ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/2.3.1/
+MASTER_SITES=          ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/2.3.2/

 MAINTAINER=            hdp%cs.nmsu.edu@localhost
 HOMEPAGE=              http://hmmer.wustl.edu/
 COMMENT=               Implementation of profile HMM software for protein 
sequence analysis

-WRKSRC=                        ${WRKDIR}/hmmer-2.3.1
+WRKSRC=                        ${WRKDIR}/hmmer-2.3.2
 USE_BUILDLINK3=                yes
 GNU_CONFIGURE=         yes

diff -bur hmmer.orig/distinfo hmmer/distinfo
--- hmmer.orig/distinfo Tue Nov 30 13:46:29 2004
+++ hmmer/distinfo      Tue Nov 30 13:46:50 2004
@@ -1,5 +1,5 @@
 $NetBSD: distinfo,v 1.3 2004/08/23 14:37:04 ben Exp $

-SHA1 (hmmer-2.3.1.tar.gz) = bf6a3ec56c24332d7e66d6ce8865de1d72dce01f
-Size (hmmer-2.3.1.tar.gz) = 1023122 bytes
+SHA1 (hmmer-2.3.2.tar.gz) = aa34cb97cbc43ff3bd92dd111ba5677298fe2d40
+Size (hmmer-2.3.2.tar.gz) = 1024933 bytes
 SHA1 (patch-aa) = e443df78be8036bb8e58567ae9e9f734f8b6ae99