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CVS commit: wip/glimmerm

Module name:    pkgsrc-wip
Committed by:   daprice
Date:           Fri Feb 25 21:41:33 UTC 2005

Import into wip/glimmerm

Log Message:
A gene finder derived from Glimmer, but developed specifically for eukaryotes. 
It is based on a dynamic programing algorithm that considers all combinations 
of possible exons for inclusion in a gene model and chooses the best of these 
combinations. It uses Interpolated Markov Model(IMM) for selecting thebest gene 
model. The system has been trained for Arabidopsis thaliana, Oryza sativa 
(rice),and Plasmodium falciparum (the malaria parasite), and should work well 
on closely related organisms.


Vendor Tag:     daprice
Release Tags:   daprice_20050225
N wip/glimmerm/DESCR
N wip/glimmerm/distinfo
N wip/glimmerm/NOTES
N wip/glimmerm/PLIST
N wip/glimmerm/Makefile
N wip/glimmerm/patches/patch-aa
N wip/glimmerm/patches/patch-ab
N wip/glimmerm/patches/patch-ad
N wip/glimmerm/patches/patch-ae
N wip/glimmerm/patches/patch-af
N wip/glimmerm/patches/patch-ac

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