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bcf-score: Update htslib and bcftools to 1.22
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Wed Jun 25 07:31:13 2025 -0500
Changeset: 0b0e5588d725a4bd1ba7ac4c3f2db5c51e44954a
Modified Files:
bcf-score/Makefile
bcf-score/distinfo
Log Message:
bcf-score: Update htslib and bcftools to 1.22
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=0b0e5588d725a4bd1ba7ac4c3f2db5c51e44954a
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
bcf-score/Makefile | 7 ++++---
bcf-score/distinfo | 6 +++---
2 files changed, 7 insertions(+), 6 deletions(-)
diffs:
diff --git a/bcf-score/Makefile b/bcf-score/Makefile
index defcd2f11c..bfa0fa13b4 100644
--- a/bcf-score/Makefile
+++ b/bcf-score/Makefile
@@ -6,8 +6,8 @@ CATEGORIES= biology
MASTER_SITES= https://software.broadinstitute.org/software/score/
MASTER_SITES+= https://github.com/samtools/bcftools/releases/download/${GH_TAG}/
DISTFILES+= score_1.20-20240505.tar.gz
-DISTFILES+= bcftools-1.21.tar.bz2
-GH_TAG= 1.21
+DISTFILES+= bcftools-1.22.tar.bz2
+GH_TAG= 1.22
OWNER= bacon%NetBSD.org@localhost
HOMEPAGE= https://software.broadinstitute.org/software/score/
@@ -66,9 +66,10 @@ do-install:
(cd ${WRKSRC}/bcf-score && pax -rw . ${DESTDIR}${DATADIR})
.include "../../devel/zlib/buildlink3.mk"
+.include "../../www/curl/buildlink3.mk"
.include "../../math/gsl/buildlink3.mk"
.include "../../lang/python/application.mk"
-.include "../../wip/htslib/buildlink3.mk"
+.include "../../biology/htslib/buildlink3.mk"
.include "../../math/suitesparse/buildlink3.mk"
.include "../../math/R/buildlink3.mk"
# Needed on Linux, even though inherited from htslib
diff --git a/bcf-score/distinfo b/bcf-score/distinfo
index 5c7fffbbb0..4b101ad338 100644
--- a/bcf-score/distinfo
+++ b/bcf-score/distinfo
@@ -1,8 +1,8 @@
$NetBSD$
-BLAKE2s (bcftools-1.21.tar.bz2) = 517b73f84870fa967e6f7f6241c446131cc54229e7ee446110955e39dfbe2563
-SHA512 (bcftools-1.21.tar.bz2) = f8fb2e50a1a9e7a7e8a4f71d71d052f6019d54c60ae060d0abfbd01ab61a2c44e04e069c479ea9f6156513b54a611a9a46930a0ff4454019bb715fdb9558d07d
-Size (bcftools-1.21.tar.bz2) = 7982173 bytes
+BLAKE2s (bcftools-1.22.tar.bz2) = 8402f5a359c80828d63ae759a7d30481e938ff50dbc389b51dbf7317e40a149f
+SHA512 (bcftools-1.22.tar.bz2) = 20daee4ecb6b7d0034e0d9590fcc42712ac78c4e511d519ac0dd98d2b2b920d85d234cf1a08abd1be62d1be994788de53d6010af642099f2b75753ecc19efd15
+Size (bcftools-1.22.tar.bz2) = 8176878 bytes
BLAKE2s (score_1.20-20240505.tar.gz) = 01791f1c3127f575f34d36fe344b838e4a55b8733791ed4ea44bcf75c2666001
SHA512 (score_1.20-20240505.tar.gz) = 6e3da79138c83a81d6392a991836c9ba6f92e13fcd1b418647eb83b83952ba79169e6ddc781700f33d9daacbef8731ba0a6f40387bfd93ce0783f78c25d9dd76
Size (score_1.20-20240505.tar.gz) = 96852 bytes
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