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sra-tools: Rewrite DESCR to be more introductory
Module Name: pkgsrc-wip
Committed By: Jason W. Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Sun Nov 17 17:39:45 2024 -0600
Changeset: 67d1a8f1ab32a6ba20f04091fbe8c75663f1a21a
Modified Files:
sra-tools/DESCR
Log Message:
sra-tools: Rewrite DESCR to be more introductory
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=67d1a8f1ab32a6ba20f04091fbe8c75663f1a21a
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
sra-tools/DESCR | 23 +++++++----------------
1 file changed, 7 insertions(+), 16 deletions(-)
diffs:
diff --git a/sra-tools/DESCR b/sra-tools/DESCR
index 84026b9986..40b82b646d 100644
--- a/sra-tools/DESCR
+++ b/sra-tools/DESCR
@@ -1,16 +1,7 @@
-SRA tools is a toolkit for using data in the INSDC Sequence Read
-Archives. SRAs operated by the International Nucleotide Sequence
-Database Collaboration house sequence reads and alignments generated
-by "next-gen" sequencers. SRA tools allows conversion of .sra
-files, which INSDC SRAs maintain, from/to other formats that the
-'next-gen' sequencers generate including:
-
-* csfasta/csqual (ABI SOLiD)
-* fastq (and fasta for writing)
-* hdf5 (PacBio, reading only)
-* qseq (older Illumina)
-* sam (writing only) / bam (reading only)
-* sff
-
-The toolkit uses the NCBI-VDB back-end enabling seamless access to
-remote SRA data and local SRA files.
+The SRA Toolkit and SDK from NCBI is a collection of tools and
+libraries for using data in the INSDC (International Nucleotide
+Sequence Database Collaboration) SRA (Sequence Read Archives). The
+SRA house sequence reads and alignments generated by DNA/RNA
+sequencers. The SRA Toolkit facilitates downloading sequence data,
+performing filtering and conversions on-the-fly, thus saving enormous
+amounts of time, bandwidth, and storage.
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