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atac-seq, chip-seq, py-dnaio, py-htseq, py-macs2, py-pysam:
Module Name: pkgsrc-wip
Committed By: Jason W. Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Tue Oct 15 06:47:17 2024 -0500
Changeset: 590785116a22a98f305cb86dff3b19e37f2e6000
Modified Files:
atac-seq/Makefile
chip-seq/Makefile
py-dnaio/Makefile
py-htseq/Makefile
py-macs2/Makefile
py-pysam/Makefile
Log Message:
atac-seq, chip-seq, py-dnaio, py-htseq, py-macs2, py-pysam:
Remove obsolete PYTHON_VERSIONS_INCOMPATIBLE
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=590785116a22a98f305cb86dff3b19e37f2e6000
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
atac-seq/Makefile | 3 ---
chip-seq/Makefile | 3 ---
py-dnaio/Makefile | 2 --
py-htseq/Makefile | 3 ---
py-macs2/Makefile | 3 ---
py-pysam/Makefile | 2 --
6 files changed, 16 deletions(-)
diffs:
diff --git a/atac-seq/Makefile b/atac-seq/Makefile
index bc7d01054a..9c1b682e76 100644
--- a/atac-seq/Makefile
+++ b/atac-seq/Makefile
@@ -33,8 +33,5 @@ DEPENDS+= zstd>0:../../archivers/zstd
META_PACKAGE= yes
-# Inherited from py-macs2 dep
-PYTHON_VERSIONS_INCOMPATIBLE= 27 38
-
.include "../../lang/python/application.mk"
.include "../../mk/bsd.pkg.mk"
diff --git a/chip-seq/Makefile b/chip-seq/Makefile
index a01ec7057e..36170f28de 100644
--- a/chip-seq/Makefile
+++ b/chip-seq/Makefile
@@ -30,8 +30,5 @@ DEPENDS+= zstd>0:../../archivers/zstd
META_PACKAGE= yes
-# Inherited from py-macs2 dep
-PYTHON_VERSIONS_INCOMPATIBLE= 27 38
-
.include "../../lang/python/application.mk"
.include "../../mk/bsd.pkg.mk"
diff --git a/py-dnaio/Makefile b/py-dnaio/Makefile
index 5aa6d838b8..96b6a4acc4 100644
--- a/py-dnaio/Makefile
+++ b/py-dnaio/Makefile
@@ -14,7 +14,5 @@ TOOL_DEPENDS+= ${PYPKGPREFIX}-setuptools_scm-[0-9]*:../../devel/py-setuptools_sc
TOOL_DEPENDS+= ${PYPKGPREFIX}-cython>=0.29.20:../../devel/py-cython
DEPENDS+= ${PYPKGPREFIX}-xopen>=1.4.0:../../devel/py-xopen
-PYTHON_VERSIONS_INCOMPATIBLE= 27
-
.include "../../lang/python/wheel.mk"
.include "../../mk/bsd.pkg.mk"
diff --git a/py-htseq/Makefile b/py-htseq/Makefile
index 5f464639b6..c871697843 100644
--- a/py-htseq/Makefile
+++ b/py-htseq/Makefile
@@ -24,9 +24,6 @@ TEST_DEPENDS+= ${PYPKGPREFIX}-matplotlib>=1.4:../../graphics/py-matplotlib
USE_LANGUAGES= c c++
-# Inherited from py-matplotlib
-PYTHON_VERSIONS_INCOMPATIBLE= 27 38
-
.include "../../lang/python/egg.mk"
.include "../../math/py-numpy/buildlink3.mk"
.include "../../mk/bsd.pkg.mk"
diff --git a/py-macs2/Makefile b/py-macs2/Makefile
index 20f7bf3f3b..eb1ffbc28d 100644
--- a/py-macs2/Makefile
+++ b/py-macs2/Makefile
@@ -14,9 +14,6 @@ LICENSE= modified-bsd
TOOL_DEPENDS+= ${PYPKGPREFIX}-cython-[0-9]*:../../devel/py-cython
-# Requires new python features
-PYTHON_VERSIONS_INCOMPATIBLE= 27 38
-
CYTHONIZE= ${PREFIX}/bin/cythonize-${PYVERSSUFFIX}
# Distributed .c files do not support python > 3.9
diff --git a/py-pysam/Makefile b/py-pysam/Makefile
index 92f1eb69e3..41a90c8851 100644
--- a/py-pysam/Makefile
+++ b/py-pysam/Makefile
@@ -27,8 +27,6 @@ MAKE_ENV+= HTSLIB_MODE=external \
MAKE_ENV+= LD_LIBRARY_PATH=${WRKSRC}/build/lib.netbsd-9.3-amd64-cpython-310/pysam/
LDFLAGS+= ${COMPILER_RPATH_FLAG}${PREFIX}/${PYSITELIB}/pysam
-PYTHON_VERSIONS_INCOMPATIBLE= 27
-
.include "../../lang/python/egg.mk"
.include "../../biology/htslib/buildlink3.mk"
.include "../../devel/py-cython/tool.mk"
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