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atac-seq: Back to py-macs2 for now
Module Name: pkgsrc-wip
Committed By: Jason W. Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Sat Dec 23 10:31:41 2023 -0600
Changeset: d84ee9ad573aa97b5ef170dd5f2003a108449bbf
Modified Files:
atac-seq/Makefile
Log Message:
atac-seq: Back to py-macs2 for now
Still working on wip/py-macs3
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=d84ee9ad573aa97b5ef170dd5f2003a108449bbf
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
atac-seq/Makefile | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diffs:
diff --git a/atac-seq/Makefile b/atac-seq/Makefile
index c070bedb1d..4bdbc0c7a9 100644
--- a/atac-seq/Makefile
+++ b/atac-seq/Makefile
@@ -3,7 +3,7 @@
# Update minor version when adding or removing dependencies
# Update revision for all other changes
-DISTNAME= atac-seq-1.2.2
+DISTNAME= atac-seq-1.3
CATEGORIES= biology meta-pkgs
MASTER_SITES= # empty
@@ -19,7 +19,7 @@ DEPENDS+= bwa>0:../../biology/bwa
DEPENDS+= bowtie2>0:../../biology/bowtie2
DEPENDS+= samtools>0:../../biology/samtools
DEPENDS+= igv>0:../../biology/igv
-DEPENDS+= ${PYPKGPREFIX}-macs3>0:../../wip/py-macs3
+DEPENDS+= ${PYPKGPREFIX}-macs2>0:../../wip/py-macs2
DEPENDS+= fasda>0:../../wip/fasda
DEPENDS+= peak-classifier>0:../../wip/peak-classifier
DEPENDS+= ${PYPKGPREFIX}-multiqc-[0-9]*:../../wip/py-multiqc
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