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py-pysam: Fix build on Darwin
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Sun Jul 30 07:44:34 2023 -0500
Changeset: 510ad590f8193cfe6762a63a823fb1d6c916aa26
Modified Files:
py-pysam/Makefile
Log Message:
py-pysam: Fix build on Darwin
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=510ad590f8193cfe6762a63a823fb1d6c916aa26
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
py-pysam/Makefile | 8 +++++---
1 file changed, 5 insertions(+), 3 deletions(-)
diffs:
diff --git a/py-pysam/Makefile b/py-pysam/Makefile
index deec6eb84f..92f1eb69e3 100644
--- a/py-pysam/Makefile
+++ b/py-pysam/Makefile
@@ -15,6 +15,11 @@ HOMEPAGE= https://github.com/pysam-developers/pysam
COMMENT= Python module for reading, manipulating and writing genomic data sets
LICENSE= mit
+SUBST_CLASSES+= rpath
+SUBST_STAGE.rpath= pre-configure
+SUBST_SED.rpath= -e 's|@rpath|${PREFIX}/${PYSITELIB}/pysam|g'
+SUBST_FILES.rpath= cy_build.py
+
USE_TOOLS+= gmake
MAKE_ENV+= HTSLIB_MODE=external \
HTSLIB_LIBRARY_DIR=${PREFIX}/lib \
@@ -24,9 +29,6 @@ LDFLAGS+= ${COMPILER_RPATH_FLAG}${PREFIX}/${PYSITELIB}/pysam
PYTHON_VERSIONS_INCOMPATIBLE= 27
-post-install:
- ${STRIP} ${DESTDIR}${PREFIX}/${PYSITELIB}/pysam/lib*.so
-
.include "../../lang/python/egg.mk"
.include "../../biology/htslib/buildlink3.mk"
.include "../../devel/py-cython/tool.mk"
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