ncbi-blast+: Work on 2.14.0 upgrade

[Jason W. Bacon <bacon4000%gmail.com@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason W. Bacon <bacon4000%gmail.com@localhost>
Pushed By:	outpaddling
Date:		Fri May 26 07:37:55 2023 -0500
Changeset:	4829b2bd7b463733c3f573f11f087aba811b0bb9

Modified Files:
	ncbi-blast+/Makefile
	ncbi-blast+/distinfo
	ncbi-blast+/patches/patch-src_build-system_cmake_cmake-cfg-xcode.sh

Log Message:
ncbi-blast+: Work on 2.14.0 upgrade

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=4829b2bd7b463733c3f573f11f087aba811b0bb9

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 ncbi-blast+/Makefile                               |  2 +-
 ncbi-blast+/distinfo                               |  8 ++++----
 ...patch-src_build-system_cmake_cmake-cfg-xcode.sh | 24 ++++++++++++++--------
 3 files changed, 20 insertions(+), 14 deletions(-)

diffs:
diff --git a/ncbi-blast+/Makefile b/ncbi-blast+/Makefile
index 321696149f..b79d362a7b 100644
--- a/ncbi-blast+/Makefile
+++ b/ncbi-blast+/Makefile
@@ -1,6 +1,6 @@
 # $NetBSD: Makefile,v 1.11 2019/08/11 13:18:00 wiz Exp $
 
-DISTNAME=	ncbi-blast-2.13.0+-src
+DISTNAME=	ncbi-blast-2.14.0+-src
 PKGNAME=	${DISTNAME:S/+-src//:S/blast/blast+/}
 PKGREVISION=	1
 CATEGORIES=	biology
diff --git a/ncbi-blast+/distinfo b/ncbi-blast+/distinfo
index f5dbdf91ab..a09c4dbcff 100644
--- a/ncbi-blast+/distinfo
+++ b/ncbi-blast+/distinfo
@@ -1,12 +1,12 @@
 $NetBSD$
 
-BLAKE2s (ncbi-blast-2.13.0+-src.tar.gz) = a83651c7f2824def1c86a8541cf7060ed77e6d60e8f7bd0383464088591733f3
-SHA512 (ncbi-blast-2.13.0+-src.tar.gz) = 7842ba4dac3d046a23cb182c6289d88cb1173e8570fb6334c1aa88dd2e640aacad43efe1ef7d69b8fedbf9b8093b7d601ef8999812d5735a6789ab2752e97c2b
-Size (ncbi-blast-2.13.0+-src.tar.gz) = 59995353 bytes
+BLAKE2s (ncbi-blast-2.14.0+-src.tar.gz) = fbda12e9d778e0a84df0195964b397a08fba4f067c55525556e3831ecdd7b252
+SHA512 (ncbi-blast-2.14.0+-src.tar.gz) = 30f6292cacb7c2ec0a00803c697ab0255ccee1c82a40923df0f3e4f856204db8da5be212b5ec02e0acb8000396a71f600c35e63f83eaf30e1a9639e4c95c4a83
+Size (ncbi-blast-2.14.0+-src.tar.gz) = 28200227 bytes
 SHA1 (patch-compilers_xcode30__prj_configure) = b89b3be8671c6c692ba474476879ee67a76fdbe5
 SHA1 (patch-src_algo_blast_core_blast__kappa.c) = 6fcad996b3a8e5b6c2400608bff9de62ebf6927f
 SHA1 (patch-src_build-system_Makefile.in.top) = 71d5246867a8c985c1175c338fb0af664094ca01
-SHA1 (patch-src_build-system_cmake_cmake-cfg-xcode.sh) = 9167a5092d30da46a06b0be05199afa3b08680c6
+SHA1 (patch-src_build-system_cmake_cmake-cfg-xcode.sh) = b50a53ac7f2bd191d0d85cf490ac891f2cf20bfa
 SHA1 (patch-src_build-system_configure) = 95185d53179a69a1b1cfa6870aca36dd962d2c43
 SHA1 (patch-src_build-system_helpers_Makefile.run__with__lock.app) = d69b9e349646c970c3b296707f917defbe39cccd
 SHA1 (patch-src_util_checksum_cityhash_city.cc) = ff8e84d90a4fc0d9d33e17abd05ed8e9f2de12fc
diff --git a/ncbi-blast+/patches/patch-src_build-system_cmake_cmake-cfg-xcode.sh b/ncbi-blast+/patches/patch-src_build-system_cmake_cmake-cfg-xcode.sh
index bf4d5908d6..5020f63241 100644
--- a/ncbi-blast+/patches/patch-src_build-system_cmake_cmake-cfg-xcode.sh
+++ b/ncbi-blast+/patches/patch-src_build-system_cmake_cmake-cfg-xcode.sh
@@ -1,15 +1,21 @@
 $NetBSD$
 
-# Portability
+# sh portability
 
---- src/build-system/cmake/cmake-cfg-xcode.sh.orig	2021-06-10 11:54:05.800996703 +0000
+--- src/build-system/cmake/cmake-cfg-xcode.sh.orig	2023-05-26 12:05:14.109542442 +0000
 +++ src/build-system/cmake/cmake-cfg-xcode.sh
-@@ -218,7 +218,7 @@ CMAKE_ARGS="$CMAKE_ARGS -DBUILD_SHARED_L
- 
+@@ -249,12 +249,12 @@ CMAKE_ARGS="$CMAKE_ARGS -DBUILD_SHARED_L
  if [ -z "$BUILD_ROOT" ]; then
-   BUILD_ROOT=CMake-${CC_NAME}${CC_VERSION}
--  if [ "$BUILD_SHARED_LIBS" == "ON" ]; then
-+  if [ "$BUILD_SHARED_LIBS" = "ON" ]; then
-     BUILD_ROOT="$BUILD_ROOT"-DLL
+   if [ -z "$BUILD_TYPE" ]; then
+     BUILD_ROOT=CMake-${CC_NAME}${CC_VERSION}
+-    if [ "$BUILD_SHARED_LIBS" == "ON" ]; then
++    if [ "$BUILD_SHARED_LIBS" = "ON" ]; then
+       BUILD_ROOT="$BUILD_ROOT"-DLL
+     fi
+   else
+     BUILD_ROOT=CMake-${CC_NAME}${CC_VERSION}-${BUILD_TYPE}
+-    if [ "$BUILD_SHARED_LIBS" == "ON" ]; then
++    if [ "$BUILD_SHARED_LIBS" = "ON" ]; then
+       BUILD_ROOT="$BUILD_ROOT"DLL
+     fi
    fi
- fi