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biolibc-tools: Update to 0.1.2.17
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Fri Apr 22 16:51:18 2022 -0500
Changeset: 7adde3f09fee09a2927fa916a11e7ab879854710
Modified Files:
biolibc-tools/Makefile
biolibc-tools/PLIST
biolibc-tools/distinfo
Log Message:
biolibc-tools: Update to 0.1.2.17
Add vcf-downsample: Extract a uniformly random sample from a VCF stream
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=7adde3f09fee09a2927fa916a11e7ab879854710
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
biolibc-tools/Makefile | 4 ++--
biolibc-tools/PLIST | 2 ++
biolibc-tools/distinfo | 6 +++---
3 files changed, 7 insertions(+), 5 deletions(-)
diffs:
diff --git a/biolibc-tools/Makefile b/biolibc-tools/Makefile
index 009f00cc33..ec2a76e530 100644
--- a/biolibc-tools/Makefile
+++ b/biolibc-tools/Makefile
@@ -1,9 +1,9 @@
# $NetBSD$
-DISTNAME= biolibc-tools-0.1.2.15
+DISTNAME= biolibc-tools-0.1.2.17
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
-GITHUB_TAG= 6b281aa46ba3609df23ca2e3ec33a82c719d2b9d
+GITHUB_TAG= b2ecf359fdcea84d8966851b570ef928903a5989
MAINTAINER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/auerlab/biolibc-tools
diff --git a/biolibc-tools/PLIST b/biolibc-tools/PLIST
index c62239a67e..ce28e1361d 100644
--- a/biolibc-tools/PLIST
+++ b/biolibc-tools/PLIST
@@ -11,6 +11,7 @@ libexec/biolibc-tools/fastx2tsv
libexec/biolibc-tools/find-orfs
libexec/biolibc-tools/gff2bed
libexec/biolibc-tools/uniq-seqs.awk
+libexec/biolibc-tools/vcf-downsample
libexec/biolibc-tools/vcf-search
man/man1/blt-chrom-lens.1
man/man1/blt-ensemblid2gene.1
@@ -22,5 +23,6 @@ man/man1/blt-fastx-stats.1
man/man1/blt-fastx2tsv.1
man/man1/blt-find-orfs.1
man/man1/blt-gff2bed.1
+man/man1/blt-vcf-downsample.1
man/man1/blt-vcf-search.1
man/man1/blt.1
diff --git a/biolibc-tools/distinfo b/biolibc-tools/distinfo
index a8a01b5901..046a78f1a8 100644
--- a/biolibc-tools/distinfo
+++ b/biolibc-tools/distinfo
@@ -1,5 +1,5 @@
$NetBSD$
-BLAKE2s (biolibc-tools-0.1.2.15-6b281aa46ba3609df23ca2e3ec33a82c719d2b9d.tar.gz) = 9f641904642422747cb82f691852849cd2f3697e21864c41a6fb07625f299cb1
-SHA512 (biolibc-tools-0.1.2.15-6b281aa46ba3609df23ca2e3ec33a82c719d2b9d.tar.gz) = 6d740d1ec6743fb7946e1485ce7f2964288b942c988f2a05149a6a40b919d394f3437ff7de2cd8e5ea71b336f439c5c20a4f92ce433275c84e4076b42bf66427
-Size (biolibc-tools-0.1.2.15-6b281aa46ba3609df23ca2e3ec33a82c719d2b9d.tar.gz) = 26696 bytes
+BLAKE2s (biolibc-tools-0.1.2.17-b2ecf359fdcea84d8966851b570ef928903a5989.tar.gz) = 05fcb7f397f89be65791e52c52cd2549206a26d30162204f1fe65ce7ff77a9d2
+SHA512 (biolibc-tools-0.1.2.17-b2ecf359fdcea84d8966851b570ef928903a5989.tar.gz) = bdcb22f62962f75ebea163cf92fb0701b9b5f59c00eaad5a4c0256763fc2fd645dbb39a302f55c3d1b03a6cf294a55e848c1a91751f5dc1d3f5d240e208c7712
+Size (biolibc-tools-0.1.2.17-b2ecf359fdcea84d8966851b570ef928903a5989.tar.gz) = 27795 bytes
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