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py-scipy: a new version (1.6.3) of py-scipy added to pkgsrc-wip
Module Name: pkgsrc-wip
Committed By: Kinoshita Daisuke <kinoshita%astro.ncu.edu.tw@localhost>
Pushed By: daisuke
Date: Sun May 2 21:11:24 2021 +0800
Changeset: 93aa13cb7f0fce9cda33e75238ef81f5089840da
Added Files:
py-scipy/DESCR
py-scipy/Makefile
py-scipy/PLIST
py-scipy/distinfo
Log Message:
py-scipy: a new version (1.6.3) of py-scipy added to pkgsrc-wip
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=93aa13cb7f0fce9cda33e75238ef81f5089840da
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
py-scipy/DESCR | 7 +
py-scipy/Makefile | 67 ++
py-scipy/PLIST | 1789 +++++++++++++++++++++++++++++++++++++++++++++++++++++
py-scipy/distinfo | 6 +
4 files changed, 1869 insertions(+)
diffs:
diff --git a/py-scipy/DESCR b/py-scipy/DESCR
new file mode 100644
index 0000000000..a5a47f87c2
--- /dev/null
+++ b/py-scipy/DESCR
@@ -0,0 +1,7 @@
+SciPy is an open source library of scientific tools for Python. SciPy
+supplements the popular Numeric module, gathering a variety of high level
+science and engineering modules together as a single package.
+
+SciPy includes modules for graphics and plotting, optimization, integration,
+special functions, signal and image processing, genetic algorithms, ODE
+solvers, and others.
diff --git a/py-scipy/Makefile b/py-scipy/Makefile
new file mode 100644
index 0000000000..3456b3a9ed
--- /dev/null
+++ b/py-scipy/Makefile
@@ -0,0 +1,67 @@
+# $NetBSD$
+
+DISTNAME= scipy-1.6.3
+PKGNAME= ${PYPKGPREFIX}-${DISTNAME}
+CATEGORIES= math python
+MASTER_SITES= ${MASTER_SITE_PYPI:=s/scipy/}
+
+MAINTAINER= pkgsrc-users%NetBSD.org@localhost
+HOMEPAGE= https://www.scipy.org/
+COMMENT= Scientific Algorithms Library for Python
+LICENSE= modified-bsd
+
+DEPENDS+= ${PYPKGPREFIX}-pybind11-[0-9]*:../../devel/py-pybind11
+TEST_DEPENDS+= ${PYPKGPREFIX}-nose-[0-9]*:../../devel/py-nose
+TEST_DEPENDS+= ${PYPKGPREFIX}-test-[0-9]*:../../devel/py-test
+
+USE_LANGUAGES+= c c++ fortran
+MAKE_ENV+= ATLAS=None
+
+# XXX Avoid picking up other compilers when installed
+.include "../../mk/compiler.mk"
+
+.if defined(PKGSRC_FORTRAN) && ${PKGSRC_FORTRAN} == "gfortran"
+PYSETUPBUILDARGS+= --fcompiler=gnu95
+.else
+BROKEN= "Requires fortran 95"
+.endif
+
+CPPFLAGS+= -D__STDC_FORMAT_MACROS
+FFLAGS+= -fPIC
+
+LDFLAGS.Darwin+= -headerpad_max_install_names
+
+PYTHON_VERSIONS_INCOMPATIBLE= 27
+
+REPLACE_PYTHON+= scipy/sparse/linalg/isolve/tests/test_gcrotmk.py
+
+.include "../../mk/bsd.prefs.mk"
+
+.if ${OPSYS} == "Darwin"
+.PHONY: fix-darwin-install-name
+post-install: fix-darwin-install-name
+fix-darwin-install-name:
+ ${FIND} ${DESTDIR}${PREFIX} -name "*.so" | \
+ while read lib; do \
+ libname=`basename $${lib}`; \
+ libdir=`dirname $${lib} | sed -e 's,${DESTDIR},,'`; \
+ install_name_tool -id $${libdir}/$${libname} $${lib}; \
+ done
+.endif
+
+# self test failures for 1.1.0 reported at
+# https://github.com/scipy/scipy/issues/9196
+# needs 'make install' first!
+do-test:
+ cd ${WRKDIR} && \
+ ${PYTHONBIN} -c "import scipy; scipy.test('full')"
+
+.include "../../devel/py-cython/buildlink3.mk"
+.include "../../devel/py-pybind11/buildlink3.mk"
+.include "../../lang/python/application.mk"
+.include "../../lang/python/distutils.mk"
+.include "../../mk/blas.buildlink3.mk"
+.include "../../math/fftw/buildlink3.mk"
+BUILDLINK_API_DEPENDS.py-numpy+= ${PYPKGPREFIX}-numpy>=1.17.3
+.include "../../math/py-numpy/buildlink3.mk"
+.include "../../mk/bsd.pkg.mk"
diff --git a/py-scipy/PLIST b/py-scipy/PLIST
new file mode 100644
index 0000000000..d6c39a5971
--- /dev/null
+++ b/py-scipy/PLIST
@@ -0,0 +1,1789 @@
+@comment $NetBSD$
+${PYSITELIB}/${EGG_FILE}/PKG-INFO
+${PYSITELIB}/${EGG_FILE}/SOURCES.txt
+${PYSITELIB}/${EGG_FILE}/dependency_links.txt
+${PYSITELIB}/${EGG_FILE}/requires.txt
+${PYSITELIB}/${EGG_FILE}/top_level.txt
+${PYSITELIB}/scipy/HACKING.rst.txt
+${PYSITELIB}/scipy/INSTALL.rst.txt
+${PYSITELIB}/scipy/LICENSE.txt
+${PYSITELIB}/scipy/__config__.py
+${PYSITELIB}/scipy/__config__.pyc
+${PYSITELIB}/scipy/__config__.pyo
+${PYSITELIB}/scipy/__init__.py
+${PYSITELIB}/scipy/__init__.pyc
+${PYSITELIB}/scipy/__init__.pyo
+${PYSITELIB}/scipy/_build_utils/__init__.py
+${PYSITELIB}/scipy/_build_utils/__init__.pyc
+${PYSITELIB}/scipy/_build_utils/__init__.pyo
+${PYSITELIB}/scipy/_build_utils/_fortran.py
+${PYSITELIB}/scipy/_build_utils/_fortran.pyc
+${PYSITELIB}/scipy/_build_utils/_fortran.pyo
+${PYSITELIB}/scipy/_build_utils/compiler_helper.py
+${PYSITELIB}/scipy/_build_utils/compiler_helper.pyc
+${PYSITELIB}/scipy/_build_utils/compiler_helper.pyo
+${PYSITELIB}/scipy/_build_utils/setup.py
+${PYSITELIB}/scipy/_build_utils/setup.pyc
+${PYSITELIB}/scipy/_build_utils/setup.pyo
+${PYSITELIB}/scipy/_build_utils/system_info.py
+${PYSITELIB}/scipy/_build_utils/system_info.pyc
+${PYSITELIB}/scipy/_build_utils/system_info.pyo
+${PYSITELIB}/scipy/_build_utils/tests/__init__.py
+${PYSITELIB}/scipy/_build_utils/tests/test_scipy_version.py
+${PYSITELIB}/scipy/_distributor_init.py
+${PYSITELIB}/scipy/_distributor_init.pyc
+${PYSITELIB}/scipy/_distributor_init.pyo
+${PYSITELIB}/scipy/_lib/__init__.py
+${PYSITELIB}/scipy/_lib/__init__.pyc
+${PYSITELIB}/scipy/_lib/__init__.pyo
+${PYSITELIB}/scipy/_lib/_bunch.py
+${PYSITELIB}/scipy/_lib/_bunch.pyc
+${PYSITELIB}/scipy/_lib/_bunch.pyo
+${PYSITELIB}/scipy/_lib/_ccallback.py
+${PYSITELIB}/scipy/_lib/_ccallback.pyc
+${PYSITELIB}/scipy/_lib/_ccallback.pyo
+${PYSITELIB}/scipy/_lib/_ccallback_c.so
+${PYSITELIB}/scipy/_lib/_disjoint_set.py
+${PYSITELIB}/scipy/_lib/_disjoint_set.pyc
+${PYSITELIB}/scipy/_lib/_disjoint_set.pyo
+${PYSITELIB}/scipy/_lib/_fpumode.so
+${PYSITELIB}/scipy/_lib/_gcutils.py
+${PYSITELIB}/scipy/_lib/_gcutils.pyc
+${PYSITELIB}/scipy/_lib/_gcutils.pyo
+${PYSITELIB}/scipy/_lib/_pep440.py
+${PYSITELIB}/scipy/_lib/_pep440.pyc
+${PYSITELIB}/scipy/_lib/_pep440.pyo
+${PYSITELIB}/scipy/_lib/_test_ccallback.so
+${PYSITELIB}/scipy/_lib/_test_deprecation_call.so
+${PYSITELIB}/scipy/_lib/_test_deprecation_def.so
+${PYSITELIB}/scipy/_lib/_testutils.py
+${PYSITELIB}/scipy/_lib/_testutils.pyc
+${PYSITELIB}/scipy/_lib/_testutils.pyo
+${PYSITELIB}/scipy/_lib/_threadsafety.py
+${PYSITELIB}/scipy/_lib/_threadsafety.pyc
+${PYSITELIB}/scipy/_lib/_threadsafety.pyo
+${PYSITELIB}/scipy/_lib/_tmpdirs.py
+${PYSITELIB}/scipy/_lib/_tmpdirs.pyc
+${PYSITELIB}/scipy/_lib/_tmpdirs.pyo
+${PYSITELIB}/scipy/_lib/_uarray/LICENSE
+${PYSITELIB}/scipy/_lib/_uarray/__init__.py
+${PYSITELIB}/scipy/_lib/_uarray/__init__.pyc
+${PYSITELIB}/scipy/_lib/_uarray/__init__.pyo
+${PYSITELIB}/scipy/_lib/_uarray/_backend.py
+${PYSITELIB}/scipy/_lib/_uarray/_backend.pyc
+${PYSITELIB}/scipy/_lib/_uarray/_backend.pyo
+${PYSITELIB}/scipy/_lib/_uarray/_uarray.so
+${PYSITELIB}/scipy/_lib/_uarray/setup.py
+${PYSITELIB}/scipy/_lib/_uarray/setup.pyc
+${PYSITELIB}/scipy/_lib/_uarray/setup.pyo
+${PYSITELIB}/scipy/_lib/_util.py
+${PYSITELIB}/scipy/_lib/_util.pyc
+${PYSITELIB}/scipy/_lib/_util.pyo
+${PYSITELIB}/scipy/_lib/decorator.py
+${PYSITELIB}/scipy/_lib/decorator.pyc
+${PYSITELIB}/scipy/_lib/decorator.pyo
+${PYSITELIB}/scipy/_lib/deprecation.py
+${PYSITELIB}/scipy/_lib/deprecation.pyc
+${PYSITELIB}/scipy/_lib/deprecation.pyo
+${PYSITELIB}/scipy/_lib/doccer.py
+${PYSITELIB}/scipy/_lib/doccer.pyc
+${PYSITELIB}/scipy/_lib/doccer.pyo
+${PYSITELIB}/scipy/_lib/messagestream.so
+${PYSITELIB}/scipy/_lib/setup.py
+${PYSITELIB}/scipy/_lib/setup.pyc
+${PYSITELIB}/scipy/_lib/setup.pyo
+${PYSITELIB}/scipy/_lib/tests/__init__.py
+${PYSITELIB}/scipy/_lib/tests/test__gcutils.py
+${PYSITELIB}/scipy/_lib/tests/test__pep440.py
+${PYSITELIB}/scipy/_lib/tests/test__testutils.py
+${PYSITELIB}/scipy/_lib/tests/test__threadsafety.py
+${PYSITELIB}/scipy/_lib/tests/test__util.py
+${PYSITELIB}/scipy/_lib/tests/test_bunch.py
+${PYSITELIB}/scipy/_lib/tests/test_ccallback.py
+${PYSITELIB}/scipy/_lib/tests/test_deprecation.py
+${PYSITELIB}/scipy/_lib/tests/test_import_cycles.py
+${PYSITELIB}/scipy/_lib/tests/test_linear_assignment.py
+${PYSITELIB}/scipy/_lib/tests/test_tmpdirs.py
+${PYSITELIB}/scipy/_lib/tests/test_warnings.py
+${PYSITELIB}/scipy/_lib/uarray.py
+${PYSITELIB}/scipy/_lib/uarray.pyc
+${PYSITELIB}/scipy/_lib/uarray.pyo
+${PYSITELIB}/scipy/cluster/__init__.py
+${PYSITELIB}/scipy/cluster/__init__.pyc
+${PYSITELIB}/scipy/cluster/__init__.pyo
+${PYSITELIB}/scipy/cluster/_hierarchy.so
+${PYSITELIB}/scipy/cluster/_optimal_leaf_ordering.so
+${PYSITELIB}/scipy/cluster/_vq.so
+${PYSITELIB}/scipy/cluster/hierarchy.py
+${PYSITELIB}/scipy/cluster/hierarchy.pyc
+${PYSITELIB}/scipy/cluster/hierarchy.pyo
+${PYSITELIB}/scipy/cluster/setup.py
+${PYSITELIB}/scipy/cluster/setup.pyc
+${PYSITELIB}/scipy/cluster/setup.pyo
+${PYSITELIB}/scipy/cluster/tests/__init__.py
+${PYSITELIB}/scipy/cluster/tests/hierarchy_test_data.py
+${PYSITELIB}/scipy/cluster/tests/test_disjoint_set.py
+${PYSITELIB}/scipy/cluster/tests/test_hierarchy.py
+${PYSITELIB}/scipy/cluster/tests/test_vq.py
+${PYSITELIB}/scipy/cluster/vq.py
+${PYSITELIB}/scipy/cluster/vq.pyc
+${PYSITELIB}/scipy/cluster/vq.pyo
+${PYSITELIB}/scipy/conftest.py
+${PYSITELIB}/scipy/conftest.pyc
+${PYSITELIB}/scipy/conftest.pyo
+${PYSITELIB}/scipy/constants/__init__.py
+${PYSITELIB}/scipy/constants/__init__.pyc
+${PYSITELIB}/scipy/constants/__init__.pyo
+${PYSITELIB}/scipy/constants/codata.py
+${PYSITELIB}/scipy/constants/codata.pyc
+${PYSITELIB}/scipy/constants/codata.pyo
+${PYSITELIB}/scipy/constants/constants.py
+${PYSITELIB}/scipy/constants/constants.pyc
+${PYSITELIB}/scipy/constants/constants.pyo
+${PYSITELIB}/scipy/constants/setup.py
+${PYSITELIB}/scipy/constants/setup.pyc
+${PYSITELIB}/scipy/constants/setup.pyo
+${PYSITELIB}/scipy/constants/tests/__init__.py
+${PYSITELIB}/scipy/constants/tests/test_codata.py
+${PYSITELIB}/scipy/constants/tests/test_constants.py
+${PYSITELIB}/scipy/fft/__init__.py
+${PYSITELIB}/scipy/fft/__init__.pyc
+${PYSITELIB}/scipy/fft/__init__.pyo
+${PYSITELIB}/scipy/fft/_backend.py
+${PYSITELIB}/scipy/fft/_backend.pyc
+${PYSITELIB}/scipy/fft/_backend.pyo
+${PYSITELIB}/scipy/fft/_basic.py
+${PYSITELIB}/scipy/fft/_basic.pyc
+${PYSITELIB}/scipy/fft/_basic.pyo
+${PYSITELIB}/scipy/fft/_debug_backends.py
+${PYSITELIB}/scipy/fft/_debug_backends.pyc
+${PYSITELIB}/scipy/fft/_debug_backends.pyo
+${PYSITELIB}/scipy/fft/_helper.py
+${PYSITELIB}/scipy/fft/_helper.pyc
+${PYSITELIB}/scipy/fft/_helper.pyo
+${PYSITELIB}/scipy/fft/_pocketfft/LICENSE.md
+${PYSITELIB}/scipy/fft/_pocketfft/__init__.py
+${PYSITELIB}/scipy/fft/_pocketfft/__init__.pyc
+${PYSITELIB}/scipy/fft/_pocketfft/__init__.pyo
+${PYSITELIB}/scipy/fft/_pocketfft/basic.py
+${PYSITELIB}/scipy/fft/_pocketfft/basic.pyc
+${PYSITELIB}/scipy/fft/_pocketfft/basic.pyo
+${PYSITELIB}/scipy/fft/_pocketfft/helper.py
+${PYSITELIB}/scipy/fft/_pocketfft/helper.pyc
+${PYSITELIB}/scipy/fft/_pocketfft/helper.pyo
+${PYSITELIB}/scipy/fft/_pocketfft/pypocketfft.so
+${PYSITELIB}/scipy/fft/_pocketfft/realtransforms.py
+${PYSITELIB}/scipy/fft/_pocketfft/realtransforms.pyc
+${PYSITELIB}/scipy/fft/_pocketfft/realtransforms.pyo
+${PYSITELIB}/scipy/fft/_pocketfft/setup.py
+${PYSITELIB}/scipy/fft/_pocketfft/setup.pyc
+${PYSITELIB}/scipy/fft/_pocketfft/setup.pyo
+${PYSITELIB}/scipy/fft/_pocketfft/tests/__init__.py
+${PYSITELIB}/scipy/fft/_pocketfft/tests/test_basic.py
+${PYSITELIB}/scipy/fft/_pocketfft/tests/test_real_transforms.py
+${PYSITELIB}/scipy/fft/_realtransforms.py
+${PYSITELIB}/scipy/fft/_realtransforms.pyc
+${PYSITELIB}/scipy/fft/_realtransforms.pyo
+${PYSITELIB}/scipy/fft/setup.py
+${PYSITELIB}/scipy/fft/setup.pyc
+${PYSITELIB}/scipy/fft/setup.pyo
+${PYSITELIB}/scipy/fft/tests/mock_backend.py
+${PYSITELIB}/scipy/fft/tests/test_backend.py
+${PYSITELIB}/scipy/fft/tests/test_fft_function.py
+${PYSITELIB}/scipy/fft/tests/test_helper.py
+${PYSITELIB}/scipy/fft/tests/test_multithreading.py
+${PYSITELIB}/scipy/fft/tests/test_numpy.py
+${PYSITELIB}/scipy/fft/tests/test_real_transforms.py
+${PYSITELIB}/scipy/fftpack/__init__.py
+${PYSITELIB}/scipy/fftpack/__init__.pyc
+${PYSITELIB}/scipy/fftpack/__init__.pyo
+${PYSITELIB}/scipy/fftpack/basic.py
+${PYSITELIB}/scipy/fftpack/basic.pyc
+${PYSITELIB}/scipy/fftpack/basic.pyo
+${PYSITELIB}/scipy/fftpack/convolve.so
+${PYSITELIB}/scipy/fftpack/helper.py
+${PYSITELIB}/scipy/fftpack/helper.pyc
+${PYSITELIB}/scipy/fftpack/helper.pyo
+${PYSITELIB}/scipy/fftpack/pseudo_diffs.py
+${PYSITELIB}/scipy/fftpack/pseudo_diffs.pyc
+${PYSITELIB}/scipy/fftpack/pseudo_diffs.pyo
+${PYSITELIB}/scipy/fftpack/realtransforms.py
+${PYSITELIB}/scipy/fftpack/realtransforms.pyc
+${PYSITELIB}/scipy/fftpack/realtransforms.pyo
+${PYSITELIB}/scipy/fftpack/setup.py
+${PYSITELIB}/scipy/fftpack/setup.pyc
+${PYSITELIB}/scipy/fftpack/setup.pyo
+${PYSITELIB}/scipy/fftpack/tests/Makefile
+${PYSITELIB}/scipy/fftpack/tests/__init__.py
+${PYSITELIB}/scipy/fftpack/tests/fftw_dct.c
+${PYSITELIB}/scipy/fftpack/tests/fftw_double_ref.npz
+${PYSITELIB}/scipy/fftpack/tests/fftw_longdouble_ref.npz
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+${PYSITELIB}/scipy/fftpack/tests/gendata.m
+${PYSITELIB}/scipy/fftpack/tests/gendata.py
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+${PYSITELIB}/scipy/fftpack/tests/test_helper.py
+${PYSITELIB}/scipy/fftpack/tests/test_import.py
+${PYSITELIB}/scipy/fftpack/tests/test_pseudo_diffs.py
+${PYSITELIB}/scipy/fftpack/tests/test_real_transforms.py
+${PYSITELIB}/scipy/integrate/__init__.py
+${PYSITELIB}/scipy/integrate/__init__.pyc
+${PYSITELIB}/scipy/integrate/__init__.pyo
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+${PYSITELIB}/scipy/integrate/_ivp/__init__.pyc
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+${PYSITELIB}/scipy/integrate/_ivp/bdf.pyc
+${PYSITELIB}/scipy/integrate/_ivp/bdf.pyo
+${PYSITELIB}/scipy/integrate/_ivp/common.py
+${PYSITELIB}/scipy/integrate/_ivp/common.pyc
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+${PYSITELIB}/scipy/integrate/_ivp/ivp.py
+${PYSITELIB}/scipy/integrate/_ivp/ivp.pyc
+${PYSITELIB}/scipy/integrate/_ivp/ivp.pyo
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+${PYSITELIB}/scipy/integrate/_ivp/lsoda.pyo
+${PYSITELIB}/scipy/integrate/_ivp/radau.py
+${PYSITELIB}/scipy/integrate/_ivp/radau.pyc
+${PYSITELIB}/scipy/integrate/_ivp/radau.pyo
+${PYSITELIB}/scipy/integrate/_ivp/rk.py
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+${PYSITELIB}/scipy/integrate/_ivp/setup.pyo
+${PYSITELIB}/scipy/integrate/_ivp/tests/test_ivp.py
+${PYSITELIB}/scipy/integrate/_ivp/tests/test_rk.py
+${PYSITELIB}/scipy/integrate/_ode.py
+${PYSITELIB}/scipy/integrate/_ode.pyc
+${PYSITELIB}/scipy/integrate/_ode.pyo
+${PYSITELIB}/scipy/integrate/_odepack.so
+${PYSITELIB}/scipy/integrate/_quad_vec.py
+${PYSITELIB}/scipy/integrate/_quad_vec.pyc
+${PYSITELIB}/scipy/integrate/_quad_vec.pyo
+${PYSITELIB}/scipy/integrate/_quadpack.so
+${PYSITELIB}/scipy/integrate/_quadrature.py
+${PYSITELIB}/scipy/integrate/_quadrature.pyc
+${PYSITELIB}/scipy/integrate/_quadrature.pyo
+${PYSITELIB}/scipy/integrate/_test_multivariate.so
+${PYSITELIB}/scipy/integrate/_test_odeint_banded.so
+${PYSITELIB}/scipy/integrate/lsoda.so
+${PYSITELIB}/scipy/integrate/odepack.py
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diff --git a/py-scipy/distinfo b/py-scipy/distinfo
new file mode 100644
index 0000000000..f9e53e42e7
--- /dev/null
+++ b/py-scipy/distinfo
@@ -0,0 +1,6 @@
+$NetBSD$
+
+SHA1 (scipy-1.6.3.tar.gz) = 7de2a7d7bfce73111c1d8aa3248bec089127e48c
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+SHA512 (scipy-1.6.3.tar.gz) = 10ff25da84ce09ae231e781873902d8040d79868721d75a3f9facee177e7f46f7c9c34374feee6fe2253ddd968716d2993658ce514c4ac0c98d255c06a6ef808
+Size (scipy-1.6.3.tar.gz) = 27187987 bytes
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