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p5-trimgalore: fix path, and replace non-existent bl3.mk inclusion with DEPENDS
Module Name: pkgsrc-wip
Committed By: Thomas Klausner <tk%giga.or.at@localhost>
Pushed By: wiz
Date: Sun Apr 18 09:13:07 2021 +0200
Changeset: 6a72d842f39a53d9ea46d244a3942e6f52f41b8a
Modified Files:
p5-trimgalore/Makefile
Log Message:
p5-trimgalore: fix path, and replace non-existent bl3.mk inclusion with DEPENDS
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=6a72d842f39a53d9ea46d244a3942e6f52f41b8a
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
p5-trimgalore/Makefile | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diffs:
diff --git a/p5-trimgalore/Makefile b/p5-trimgalore/Makefile
index f9ee6ff525..cacb236ce3 100644
--- a/p5-trimgalore/Makefile
+++ b/p5-trimgalore/Makefile
@@ -17,7 +17,8 @@ HOMEPAGE= https://github.com/FelixKrueger/TrimGalore
COMMENT= Wrapper around Cutadapt and FastQC for adapter and quality trimming
LICENSE= gnu-gpl-v3
-DEPENDS+= fastqc>0:../../wip/fastqc
+DEPENDS+= fastqc-[0-9]*:../../biology/fastqc
+DEPENDS+= ${PY}-cutadapt-[0-9]*:../../biology/py-cutadapt
USE_TOOLS+= perl:run pax
REPLACE_PERL= trim_galore
@@ -34,6 +35,5 @@ do-install:
${INSTALL_SCRIPT} ${WRKSRC}/trim_galore ${DESTDIR}${PREFIX}/bin
cd ${WRKSRC} && pax -rw test_files ${DESTDIR}${DATADIR}
-.include "../../biology/py-cutadapt/buildlink3.mk"
.include "../../lang/python/application.mk"
.include "../../mk/bsd.pkg.mk"
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