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samtools: Update to 1.12
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Fri Mar 19 12:41:02 2021 -0500
Changeset: 841ca7a13451caab2a59b3e2ea786740cf6c9123
Modified Files:
samtools/Makefile
samtools/PLIST
samtools/distinfo
Log Message:
samtools: Update to 1.12
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=841ca7a13451caab2a59b3e2ea786740cf6c9123
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
samtools/Makefile | 2 +-
samtools/PLIST | 1 +
samtools/distinfo | 8 ++++----
3 files changed, 6 insertions(+), 5 deletions(-)
diffs:
diff --git a/samtools/Makefile b/samtools/Makefile
index 4630d5e1bd..a5063e7d33 100644
--- a/samtools/Makefile
+++ b/samtools/Makefile
@@ -1,6 +1,6 @@
# $NetBSD: Makefile,v 1.7 2020/01/26 17:30:46 rillig Exp $
-DISTNAME= samtools-1.11
+DISTNAME= samtools-1.12
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=samtools/}
diff --git a/samtools/PLIST b/samtools/PLIST
index 9945ad2fc2..5d35ac6d91 100644
--- a/samtools/PLIST
+++ b/samtools/PLIST
@@ -3,6 +3,7 @@ bin/ace2sam
bin/blast2sam.pl
bin/bowtie2sam.pl
bin/export2sam.pl
+bin/fasta-sanitize.pl
bin/interpolate_sam.pl
bin/maq2sam-long
bin/maq2sam-short
diff --git a/samtools/distinfo b/samtools/distinfo
index 6402f53bd2..ac849f5be5 100644
--- a/samtools/distinfo
+++ b/samtools/distinfo
@@ -1,7 +1,7 @@
$NetBSD$
-SHA1 (samtools-1.11.tar.gz) = c3e697ea05ab65c5d6f2c447f842e45b41240d60
-RMD160 (samtools-1.11.tar.gz) = e325f48492b830773d240b8af01536fb13b68b19
-SHA512 (samtools-1.11.tar.gz) = 27037a750227d1ad0558875e6ce2ee98f55a58b20295699a14b58654807db260a21f45d30920e28bc5bbdf300bd55a0cafc1c7c447bce307d42b81499ba51339
-Size (samtools-1.11.tar.gz) = 4516328 bytes
+SHA1 (samtools-1.12.tar.gz) = f46eb3a18885fb352d8746d51a206f7f34916232
+RMD160 (samtools-1.12.tar.gz) = 511ba541e9f3dbbab333d4a24a83f63c628b5b18
+SHA512 (samtools-1.12.tar.gz) = 7f468a4740610c2fdc42d8f020d3082e5b2b2e73b0c2dfc19b212ca259d703f34f7df0922e409a94500ccc0357d4d46306035be29c23a523ef6e959022f9d1db
+Size (samtools-1.12.tar.gz) = 4528460 bytes
SHA1 (patch-Makefile) = 12dd394dcf9d29f612f5ebac5731f3369109397e
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