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ad2vcf: Update to latest commit
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Wed Jul 22 16:00:45 2020 +0000
Changeset: 8db3b647b890bba1583811c0c857e5cd6e823a4e
Modified Files:
ad2vcf/Makefile
ad2vcf/distinfo
Log Message:
ad2vcf: Update to latest commit
Add filtering for low quality reads and bases
Add mostly random PHRED scores to test.sam
Add two reads to test.sam to test quality filtering
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=8db3b647b890bba1583811c0c857e5cd6e823a4e
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
ad2vcf/Makefile | 4 ++--
ad2vcf/distinfo | 8 ++++----
2 files changed, 6 insertions(+), 6 deletions(-)
diffs:
diff --git a/ad2vcf/Makefile b/ad2vcf/Makefile
index 65158c4320..a5b498d7e2 100644
--- a/ad2vcf/Makefile
+++ b/ad2vcf/Makefile
@@ -5,11 +5,11 @@
# Tue May 19 13:12:28 CDT 2020 #
###########################################################
-DISTNAME= ad2vcf-0.1.1.25
+DISTNAME= ad2vcf-0.1.1.27
CATEGORIES= biology
MASTER_SITES= ${MASTER_SITE_GITHUB:=auerlab/}
GITHUB_PROJECT= ad2vcf
-GITHUB_TAG= 2d2691c8452e32b9e53259111f425df23def6a41
+GITHUB_TAG= a187ee41b3dd565a111b768203eebb64b7a3d0e9
MAINTAINER= bacon%NetBSD.org@localhost
HOMEPAGE= https://github.com/auerlab/ad2vcf
diff --git a/ad2vcf/distinfo b/ad2vcf/distinfo
index 6cbb0f08a6..f1d1c33f59 100644
--- a/ad2vcf/distinfo
+++ b/ad2vcf/distinfo
@@ -1,6 +1,6 @@
$NetBSD$
-SHA1 (ad2vcf-0.1.1.25-2d2691c8452e32b9e53259111f425df23def6a41.tar.gz) = 1792077a2b7ae41aef0391353561707d6fe9bf26
-RMD160 (ad2vcf-0.1.1.25-2d2691c8452e32b9e53259111f425df23def6a41.tar.gz) = 92ca96ca23f09ddf2ad83fa83b0f1383bdcdf539
-SHA512 (ad2vcf-0.1.1.25-2d2691c8452e32b9e53259111f425df23def6a41.tar.gz) = 47c9010a7570c223c45c132b24869e244e5645b0452731a8ea366ac92e960caa004bdf788fbfa055b2a9b1cdbd0035e2ead36627386318cfabfbf512a4314341
-Size (ad2vcf-0.1.1.25-2d2691c8452e32b9e53259111f425df23def6a41.tar.gz) = 10548 bytes
+SHA1 (ad2vcf-0.1.1.27-a187ee41b3dd565a111b768203eebb64b7a3d0e9.tar.gz) = 328c4ea906e3523745c175ec5d4023a16e5bfbc5
+RMD160 (ad2vcf-0.1.1.27-a187ee41b3dd565a111b768203eebb64b7a3d0e9.tar.gz) = 4205fc4a0bf5f509f1d91114670ad5e104cf22b6
+SHA512 (ad2vcf-0.1.1.27-a187ee41b3dd565a111b768203eebb64b7a3d0e9.tar.gz) = 112f6581e094834f42bb6a49fc9148de4d6ac13e2e00d5c8a82d67f8aea86f2eacfbb4a97bfe52a77e8b33b910c47f68cca3cab321f2abeff27b1afcbdccf25e
+Size (ad2vcf-0.1.1.27-a187ee41b3dd565a111b768203eebb64b7a3d0e9.tar.gz) = 11554 bytes
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