wip/biolibc: import biolibc-0.1.0.16

[Jason Bacon <bacon%NetBSD.org@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Tue May 19 13:11:31 2020 -0500
Changeset:	351c430a8874cd7b00777589f6a24d64e5181a23

Added Files:
	biolibc/DESCR
	biolibc/Makefile
	biolibc/PLIST
	biolibc/buildlink3.mk
	biolibc/distinfo

Log Message:
wip/biolibc: import biolibc-0.1.0.16

Biolibc is a library of fast, memory-efficient, low-level functions for
processing biological data.

Like libc, it consists of numerous disparate, general-purpose functions which
could be used by a wide variety of applications.

These include functions for streaming common file formats such as SAM and VCF,
string functions specific to bioinformatics, etc.

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=351c430a8874cd7b00777589f6a24d64e5181a23

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 biolibc/DESCR         |  8 ++++++++
 biolibc/Makefile      | 21 +++++++++++++++++++++
 biolibc/PLIST         |  6 ++++++
 biolibc/buildlink3.mk | 16 ++++++++++++++++
 biolibc/distinfo      |  6 ++++++
 5 files changed, 57 insertions(+)

diffs:
diff --git a/biolibc/DESCR b/biolibc/DESCR
new file mode 100644
index 0000000000..d2a5272509
--- /dev/null
+++ b/biolibc/DESCR
@@ -0,0 +1,8 @@
+Biolibc is a library of fast, memory-efficient, low-level functions for
+processing biological data.
+
+Like libc, it consists of numerous disparate, general-purpose functions which
+could be used by a wide variety of applications.
+
+These include functions for streaming common file formats such as SAM and VCF,
+string functions specific to bioinformatics, etc.
diff --git a/biolibc/Makefile b/biolibc/Makefile
new file mode 100644
index 0000000000..ade55c2f40
--- /dev/null
+++ b/biolibc/Makefile
@@ -0,0 +1,21 @@
+# $NetBSD$
+#
+###########################################################
+#                  Generated by fbsd2pkg                  #
+#              Tue May 19 13:03:08 CDT 2020               #
+###########################################################
+
+DISTNAME=	biolibc-0.1.0.16
+CATEGORIES=	biology
+MASTER_SITES=	${MASTER_SITE_GITHUB:=auerlab/}
+GITHUB_PROJECT=	biolibc
+GITHUB_TAG=	695b4ac32dab35dc29abc27c8365c6ba6cda2a58
+
+MAINTAINER=	bacon%NetBSD.org@localhost
+HOMEPAGE=	https://github.com/auerlab/vcfio
+COMMENT=	Low-level high-performance bioinformatics library
+LICENSE=	2-clause-bsd
+
+# CentOS doesn't have zlib in the base, so uncomment if needed.
+# .include "../../devel/zlib/buildlink3.mk"
+.include "../../mk/bsd.pkg.mk"
diff --git a/biolibc/PLIST b/biolibc/PLIST
new file mode 100644
index 0000000000..d3171ce8bd
--- /dev/null
+++ b/biolibc/PLIST
@@ -0,0 +1,6 @@
+@comment $NetBSD$
+include/biostring.h
+include/samio.h
+include/tsvio.h
+include/vcfio.h
+lib/libbiolibc.a
diff --git a/biolibc/buildlink3.mk b/biolibc/buildlink3.mk
new file mode 100644
index 0000000000..e284e53b53
--- /dev/null
+++ b/biolibc/buildlink3.mk
@@ -0,0 +1,16 @@
+# $NetBSD$
+# XXX Packages that only install static libraries or headers should
+# XXX include the following line:
+# XXX
+
+BUILDLINK_TREE+=	biolibc
+
+.if !defined(BIOLIBC_BUILDLINK3_MK)
+BIOLIBC_BUILDLINK3_MK:=
+
+BUILDLINK_API_DEPENDS.biolibc+=	biolibc>=0.1.0.16
+BUILDLINK_PKGSRCDIR.biolibc?=	../../wip/biolibc
+BUILDLINK_DEPMETHOD.biolibc?=	build
+.endif	# BIOLIBC_BUILDLINK3_MK
+
+BUILDLINK_TREE+=	-biolibc
diff --git a/biolibc/distinfo b/biolibc/distinfo
new file mode 100644
index 0000000000..23a8c99054
--- /dev/null
+++ b/biolibc/distinfo
@@ -0,0 +1,6 @@
+$NetBSD$
+
+SHA1 (biolibc-0.1.0.16-695b4ac32dab35dc29abc27c8365c6ba6cda2a58.tar.gz) = d41c85ab8f93cc9b5edaccfc1eaf2e68823a1c13
+RMD160 (biolibc-0.1.0.16-695b4ac32dab35dc29abc27c8365c6ba6cda2a58.tar.gz) = 6ca60ffdea7cfa421419e1b174ce5fc371061557
+SHA512 (biolibc-0.1.0.16-695b4ac32dab35dc29abc27c8365c6ba6cda2a58.tar.gz) = 28d96396a47b0e7e0a5f04f43f4d729d01df30cf8c388533c0e92d39cffcbba58daf889e55f209163ff623bd3eee7500b10f0414871f8846a4b1d1df022e8ff9
+Size (biolibc-0.1.0.16-695b4ac32dab35dc29abc27c8365c6ba6cda2a58.tar.gz) = 9206 bytes