htslib: Upgrade to 1.8

[Jason Bacon <bacon%NetBSD.org@localhost>]

Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Fri Apr 27 12:05:20 2018 -0500
Changeset:	c8d5c6e296524385f9821f89d2a4f7f606ce65fa

Modified Files:
	htslib/Makefile
	htslib/PLIST
	htslib/buildlink3.mk
	htslib/distinfo

Log Message:
htslib: Upgrade to 1.8

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=c8d5c6e296524385f9821f89d2a4f7f606ce65fa

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 htslib/Makefile      | 13 ++++---------
 htslib/PLIST         |  1 +
 htslib/buildlink3.mk |  2 +-
 htslib/distinfo      |  8 ++++----
 4 files changed, 10 insertions(+), 14 deletions(-)

diffs:
diff --git a/htslib/Makefile b/htslib/Makefile
index cd158e4775..9fc894ed82 100644
--- a/htslib/Makefile
+++ b/htslib/Makefile
@@ -1,15 +1,10 @@
 # $NetBSD$
-#
-###########################################################
-#                  Generated by fbsd2pkg                  #
-#              Wed May 11 08:14:16 CDT 2016               #
-###########################################################
 
-DISTNAME=	htslib-${PORTVERSION}
+DISTNAME=	htslib-${PV}
 CATEGORIES=	biology
 MASTER_SITES=	${MASTER_SITE_GITHUB:=samtools/}
 GITHUB_PROJECT=	htslib
-GITHUB_TAG=	${PORTVERSION}
+GITHUB_TAG=	${PV}
 
 MAINTAINER=	bacon%NetBSD.org@localhost
 HOMEPAGE=	http://www.htslib.org/
@@ -22,12 +17,12 @@ REPLACE_PERL=	test/compare_sam.pl test/test.pl
 
 SUBST_CLASSES+=		version
 SUBST_STAGE.version=	post-patch
-SUBST_SED.version+=	-e "s|m4_esyscmd_s(\[make print-version\])|[${PORTVERSION}]|"
+SUBST_SED.version+=	-e "s|m4_esyscmd_s(\[make print-version\])|[${PV}]|"
 SUBST_FILES.version+=	${WRKSRC}/configure.ac
 
 PKGCONFIG_OVERRIDE=	htslib.pc.in
 
-PORTVERSION=	1.6
+PV=	1.8
 
 pre-configure:
 	cd ${WRKSRC} && autoreconf
diff --git a/htslib/PLIST b/htslib/PLIST
index 893aff019a..449307bed6 100644
--- a/htslib/PLIST
+++ b/htslib/PLIST
@@ -33,6 +33,7 @@ lib/libhts.so
 lib/libhts.so.${PKGVERSION}
 lib/libhts.so.2
 lib/pkgconfig/htslib.pc
+man/man1/bgzip.1
 man/man1/htsfile.1
 man/man1/tabix.1
 man/man5/faidx.5
diff --git a/htslib/buildlink3.mk b/htslib/buildlink3.mk
index d63a24d0e8..084934f941 100644
--- a/htslib/buildlink3.mk
+++ b/htslib/buildlink3.mk
@@ -5,7 +5,7 @@ BUILDLINK_TREE+=	htslib
 .if !defined(HTSLIB_BUILDLINK3_MK)
 HTSLIB_BUILDLINK3_MK:=
 
-BUILDLINK_API_DEPENDS.htslib+=	htslib>=1.3
+BUILDLINK_API_DEPENDS.htslib+=	htslib>=1.8
 BUILDLINK_PKGSRCDIR.htslib?=	../../wip/htslib
 
 .endif	# HTSLIB_BUILDLINK3_MK
diff --git a/htslib/distinfo b/htslib/distinfo
index d7c092663d..5f0705a243 100644
--- a/htslib/distinfo
+++ b/htslib/distinfo
@@ -1,6 +1,6 @@
 $NetBSD$
 
-SHA1 (htslib-1.6.tar.gz) = 14281b35dde9d94be16c9986de435de19adba822
-RMD160 (htslib-1.6.tar.gz) = 8a16541cacb7b25a664287b4a1c48d935c3f6d5c
-SHA512 (htslib-1.6.tar.gz) = 5c1a314cae3b106c83f11166e294b94895ed915da010270f239ae52dd77a19039c227bf9f6a7f36894cb9b77f361b2aa6150381487d9a1bc6f1176e7817d34d3
-Size (htslib-1.6.tar.gz) = 1155672 bytes
+SHA1 (htslib-1.8.tar.gz) = bc9dd2ca08de99b0b30bb7f5d64bfa0e8c3d35fd
+RMD160 (htslib-1.8.tar.gz) = 400ee0a4994c01e314394bd6a2dceedaa93ec7af
+SHA512 (htslib-1.8.tar.gz) = 888c815d5b202a624cfc99dfe4f795825defd4dcd2420153314096c8fe79532e0a21e0be6bd3b5a4f86dfa1e7c4524271b3f960ab871812abe5a1961d05d568c
+Size (htslib-1.8.tar.gz) = 1262465 bytes