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p5-trimgalore: Clean up



Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon4000%gmail.com@localhost>
Pushed By:	outpaddling
Date:		Fri Nov 3 16:45:20 2017 -0500
Changeset:	5e253b38f60c275161093a4906a90e552086ba4a

Modified Files:
	p5-trimgalore/Makefile

Log Message:
p5-trimgalore: Clean up

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=5e253b38f60c275161093a4906a90e552086ba4a

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 p5-trimgalore/Makefile | 15 +++------------
 1 file changed, 3 insertions(+), 12 deletions(-)

diffs:
diff --git a/p5-trimgalore/Makefile b/p5-trimgalore/Makefile
index c5fc4546c8..69f6baac07 100644
--- a/p5-trimgalore/Makefile
+++ b/p5-trimgalore/Makefile
@@ -5,20 +5,9 @@
 #              Thu Nov  2 15:12:06 CDT 2017               #
 ###########################################################
 
-###########################################################
-# Unconverted and partially converted FreeBSD port syntax:
-
-#LICENSE_FILE=	${WRKSRC}/LICENSE
-# Do we really need p5-IPC-Open3-Simple or is IPC:Open3 part of core?
-# RUN_DEPENDS=	p5-IPC-Open3-Simple>=0:devel/p5-IPC-Open3-Simple \
-#		p5-File-Spec-Native>=0:devel/p5-File-Spec-Native \
-#		p5-File-BaseDir>=0:devel/p5-File-BaseDir \
-#		p5-Cwd-Guard>=0:devel/p5-Cwd-Guard \
-#		fastqc>0:wip/fastqc
-
 DISTNAME=	trimgalore-${PORTVERSION}
 PKGNAME=	p5-trimgalore-${PORTVERSION}
-CATEGORIES=	wip
+CATEGORIES=	biology
 MASTER_SITES=	${MASTER_SITE_GITHUB:=FelixKrueger/}
 GITHUB_PROJECT=	trimgalore
 GITHUB_TAG=	${PORTVERSION}
@@ -28,6 +17,8 @@ HOMEPAGE=	https://github.com/FelixKrueger/TrimGalore
 COMMENT=	Wrapper around Cutadapt and FastQC for adapter and quality trimming
 LICENSE=	gnu-gpl-v3
 
+DEPENDS+=	fastqc>0:../../wip/fastqc
+
 USE_TOOLS+=	perl:run pax
 REPLACE_PERL=	trim_galore
 NO_BUILD=	yes


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