'Add tabixpp: C++ wrapper to tabix indexer'

[Jason Bacon <bacon@centosdev.local>]

Module Name:	pkgsrc-wip
Committed By:	Jason Bacon <bacon@centosdev.local>
Pushed By:	outpaddling
Date:		Thu Mar 30 20:00:07 2017 -0500
Changeset:	9e20f95fbcffe28953f1e5e41206d392dbe9ec53

Modified Files:
	Makefile
Added Files:
	tabixpp/DESCR
	tabixpp/Makefile
	tabixpp/PLIST
	tabixpp/TODO
	tabixpp/buildlink3.mk
	tabixpp/distinfo

Log Message:
'Add tabixpp: 	C++ wrapper to tabix indexer'

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=9e20f95fbcffe28953f1e5e41206d392dbe9ec53

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 Makefile              |  1 +
 tabixpp/DESCR         |  1 +
 tabixpp/Makefile      | 33 +++++++++++++++++++++++++++++++++
 tabixpp/PLIST         |  5 +++++
 tabixpp/TODO          |  1 +
 tabixpp/buildlink3.mk | 12 ++++++++++++
 tabixpp/distinfo      |  6 ++++++
 7 files changed, 59 insertions(+)

diffs:
diff --git a/Makefile b/Makefile
index 199d461871..d127e217b0 100644
--- a/Makefile
+++ b/Makefile
@@ -4111,6 +4111,7 @@ SUBDIR+=	syx
 SUBDIR+=	t-coffee
 SUBDIR+=	t-gnus
 SUBDIR+=	ta-lib
+SUBDIR+=	tabixpp
 SUBDIR+=	tac_plus-libradius
 SUBDIR+=	taglib-sharp
 SUBDIR+=	tagtool
diff --git a/tabixpp/DESCR b/tabixpp/DESCR
new file mode 100644
index 0000000000..3f3e367b1d
--- /dev/null
+++ b/tabixpp/DESCR
@@ -0,0 +1 @@
+C++ wrapper to tabix indexer.
diff --git a/tabixpp/Makefile b/tabixpp/Makefile
new file mode 100644
index 0000000000..0bb67b6b82
--- /dev/null
+++ b/tabixpp/Makefile
@@ -0,0 +1,33 @@
+# $NetBSD$
+#
+###########################################################
+#               Generated by fbsd2pkg                     #
+###########################################################
+
+DISTNAME=	tabixpp-${PORTVERSION}
+CATEGORIES=	biology
+MASTER_SITES=	${MASTER_SITE_GITHUB:=outpaddling/}
+GITHUB_TAG=	${PORTVERSION}
+
+MAINTAINER=	bacon4000%gmail.com@localhost
+HOMEPAGE=	https://github.com/ekg/tabixpp
+COMMENT=	C++ wrapper to tabix indexer
+# LICENSE=	unspecified
+
+# Test and change if necessary.
+# MAKE_JOBS_SAFE=	no
+
+# Just assuming C and C++: Adjust this!
+USE_LANGUAGES=	c c++
+
+CXXFLAGS+=	-I${LOCALBASE}/include
+MAKE_ENV+=	HTS_HEADERS='' LIBPATH=-L${LOCALBASE}/lib HTS_LIB=''
+INSTALL_TARGET=	install-strip
+
+PORTVERSION=	38607a5128b4e61828d4961f588e7a185bf396b7
+DATADIR=	${PREFIX}/share/tabixpp
+DOCSDIR=	${PREFIX}/share/doc/tabixpp
+
+.include "../../wip/htslib/buildlink3.mk"
+.include "../../devel/zlib/buildlink3.mk"
+.include "../../mk/bsd.pkg.mk"
diff --git a/tabixpp/PLIST b/tabixpp/PLIST
new file mode 100644
index 0000000000..7249f9bdeb
--- /dev/null
+++ b/tabixpp/PLIST
@@ -0,0 +1,5 @@
+@comment $NetBSD$
+bin/tabix++
+include/tabix.hpp
+lib/libtabix.a
+lib/libtabix.so.1
diff --git a/tabixpp/TODO b/tabixpp/TODO
new file mode 100644
index 0000000000..b687356e6b
--- /dev/null
+++ b/tabixpp/TODO
@@ -0,0 +1 @@
+Clean up and test
diff --git a/tabixpp/buildlink3.mk b/tabixpp/buildlink3.mk
new file mode 100644
index 0000000000..13a0d94966
--- /dev/null
+++ b/tabixpp/buildlink3.mk
@@ -0,0 +1,12 @@
+# $NetBSD$
+
+BUILDLINK_TREE+=	tabixpp
+
+.if !defined(TABIXPP_BUILDLINK3_MK)
+TABIXPP_BUILDLINK3_MK:=
+
+BUILDLINK_API_DEPENDS.tabixpp+=	tabixpp>=38607a5128b4e61828d4961f588e7a185bf396b7
+BUILDLINK_PKGSRCDIR.tabixpp?=	../../wip/tabixpp
+.endif	# TABIXPP_BUILDLINK3_MK
+
+BUILDLINK_TREE+=	-tabixpp
diff --git a/tabixpp/distinfo b/tabixpp/distinfo
new file mode 100644
index 0000000000..2d832d6efe
--- /dev/null
+++ b/tabixpp/distinfo
@@ -0,0 +1,6 @@
+$NetBSD$
+
+SHA1 (tabixpp-38607a5128b4e61828d4961f588e7a185bf396b7-38607a5128b4e61828d4961f588e7a185bf396b7.tar.gz) = 5d58e334b4fd7c5993a2b0ad350b845b4f6e56e7
+RMD160 (tabixpp-38607a5128b4e61828d4961f588e7a185bf396b7-38607a5128b4e61828d4961f588e7a185bf396b7.tar.gz) = 60489502f91051c82be57e42462eae254cbe50b3
+SHA512 (tabixpp-38607a5128b4e61828d4961f588e7a185bf396b7-38607a5128b4e61828d4961f588e7a185bf396b7.tar.gz) = 29e81c431aae8a2bd22789da3a1fc6b6cc6f11cb12eb2afdfea3f01e1f136fe843f774d0709901173720a7634cce34966ba9f9fe59fc7b18ab961d2de3f0219c
+Size (tabixpp-38607a5128b4e61828d4961f588e7a185bf396b7-38607a5128b4e61828d4961f588e7a185bf396b7.tar.gz) = 3261 bytes