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CVS commit: pkgsrc/math/py-scikit-learn
Module Name: pkgsrc
Committed By: adam
Date: Mon Jul 17 19:51:04 UTC 2023
Modified Files:
pkgsrc/math/py-scikit-learn: Makefile PLIST distinfo
Log Message:
py-scikit-learn: updated to 1.3.0
1.3.0
Metadata Routing
HDBSCAN: hierarchical density-based clustering
TargetEncoder: a new category encoding strategy
Missing values support in decision trees
New display model_selection.ValidationCurveDisplay
Gamma loss for gradient boosting
Grouping infrequent categories in preprocessing.OrdinalEncoder
To generate a diff of this commit:
cvs rdiff -u -r1.20 -r1.21 pkgsrc/math/py-scikit-learn/Makefile
cvs rdiff -u -r1.7 -r1.8 pkgsrc/math/py-scikit-learn/PLIST
cvs rdiff -u -r1.10 -r1.11 pkgsrc/math/py-scikit-learn/distinfo
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
Modified files:
Index: pkgsrc/math/py-scikit-learn/Makefile
diff -u pkgsrc/math/py-scikit-learn/Makefile:1.20 pkgsrc/math/py-scikit-learn/Makefile:1.21
--- pkgsrc/math/py-scikit-learn/Makefile:1.20 Sat Jul 1 08:37:41 2023
+++ pkgsrc/math/py-scikit-learn/Makefile Mon Jul 17 19:51:04 2023
@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.20 2023/07/01 08:37:41 wiz Exp $
+# $NetBSD: Makefile,v 1.21 2023/07/17 19:51:04 adam Exp $
-DISTNAME= scikit-learn-1.2.2
+DISTNAME= scikit-learn-1.3.0
PKGNAME= ${PYPKGPREFIX}-${DISTNAME}
CATEGORIES= math python
MASTER_SITES= ${MASTER_SITE_PYPI:=s/scikit-learn/}
@@ -11,14 +11,14 @@ COMMENT= Machine learning algorithms for
LICENSE= modified-bsd
DEPENDS+= ${PYPKGPREFIX}-joblib>=1.1.1:../../devel/py-joblib
-DEPENDS+= ${PYPKGPREFIX}-scipy>=1.3.2:../../math/py-scipy
+DEPENDS+= ${PYPKGPREFIX}-scipy>=1.5.0:../../math/py-scipy
DEPENDS+= ${PYPKGPREFIX}-threadpoolctl>=2.0.0:../../parallel/py-threadpoolctl
TEST_DEPENDS+= ${PYPKGPREFIX}-test>=5.3.1:../../devel/py-test
TEST_DEPENDS+= ${PYPKGPREFIX}-test-cov>=2.9.0:../../devel/py-test-cov
USE_LANGUAGES= c c++ fortran
-PYTHON_VERSIONS_INCOMPATIBLE= 27 37 38
+PYTHON_VERSIONS_INCOMPATIBLE= 27 38
.include "../../devel/py-cython/buildlink3.mk"
.include "../../lang/python/egg.mk"
Index: pkgsrc/math/py-scikit-learn/PLIST
diff -u pkgsrc/math/py-scikit-learn/PLIST:1.7 pkgsrc/math/py-scikit-learn/PLIST:1.8
--- pkgsrc/math/py-scikit-learn/PLIST:1.7 Tue May 9 08:07:34 2023
+++ pkgsrc/math/py-scikit-learn/PLIST Mon Jul 17 19:51:04 2023
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.7 2023/05/09 08:07:34 adam Exp $
+@comment $NetBSD: PLIST,v 1.8 2023/07/17 19:51:04 adam Exp $
${PYSITELIB}/${EGG_INFODIR}/PKG-INFO
${PYSITELIB}/${EGG_INFODIR}/SOURCES.txt
${PYSITELIB}/${EGG_INFODIR}/dependency_links.txt
@@ -33,9 +33,6 @@ ${PYSITELIB}/sklearn/_loss/__init__.pyc
${PYSITELIB}/sklearn/_loss/__init__.pyo
${PYSITELIB}/sklearn/_loss/_loss.pxd
${PYSITELIB}/sklearn/_loss/_loss.so
-${PYSITELIB}/sklearn/_loss/glm_distribution.py
-${PYSITELIB}/sklearn/_loss/glm_distribution.pyc
-${PYSITELIB}/sklearn/_loss/glm_distribution.pyo
${PYSITELIB}/sklearn/_loss/link.py
${PYSITELIB}/sklearn/_loss/link.pyc
${PYSITELIB}/sklearn/_loss/link.pyo
@@ -45,9 +42,6 @@ ${PYSITELIB}/sklearn/_loss/loss.pyo
${PYSITELIB}/sklearn/_loss/tests/__init__.py
${PYSITELIB}/sklearn/_loss/tests/__init__.pyc
${PYSITELIB}/sklearn/_loss/tests/__init__.pyo
-${PYSITELIB}/sklearn/_loss/tests/test_glm_distribution.py
-${PYSITELIB}/sklearn/_loss/tests/test_glm_distribution.pyc
-${PYSITELIB}/sklearn/_loss/tests/test_glm_distribution.pyo
${PYSITELIB}/sklearn/_loss/tests/test_link.py
${PYSITELIB}/sklearn/_loss/tests/test_link.pyc
${PYSITELIB}/sklearn/_loss/tests/test_link.pyo
@@ -88,6 +82,23 @@ ${PYSITELIB}/sklearn/cluster/_dbscan_inn
${PYSITELIB}/sklearn/cluster/_feature_agglomeration.py
${PYSITELIB}/sklearn/cluster/_feature_agglomeration.pyc
${PYSITELIB}/sklearn/cluster/_feature_agglomeration.pyo
+${PYSITELIB}/sklearn/cluster/_hdbscan/__init__.py
+${PYSITELIB}/sklearn/cluster/_hdbscan/__init__.pyc
+${PYSITELIB}/sklearn/cluster/_hdbscan/__init__.pyo
+${PYSITELIB}/sklearn/cluster/_hdbscan/_linkage.so
+${PYSITELIB}/sklearn/cluster/_hdbscan/_reachability.so
+${PYSITELIB}/sklearn/cluster/_hdbscan/_tree.pxd
+${PYSITELIB}/sklearn/cluster/_hdbscan/_tree.so
+${PYSITELIB}/sklearn/cluster/_hdbscan/hdbscan.py
+${PYSITELIB}/sklearn/cluster/_hdbscan/hdbscan.pyc
+${PYSITELIB}/sklearn/cluster/_hdbscan/hdbscan.pyo
+${PYSITELIB}/sklearn/cluster/_hdbscan/tests/__init__.py
+${PYSITELIB}/sklearn/cluster/_hdbscan/tests/__init__.pyc
+${PYSITELIB}/sklearn/cluster/_hdbscan/tests/__init__.pyo
+${PYSITELIB}/sklearn/cluster/_hdbscan/tests/test_reachibility.py
+${PYSITELIB}/sklearn/cluster/_hdbscan/tests/test_reachibility.pyc
+${PYSITELIB}/sklearn/cluster/_hdbscan/tests/test_reachibility.pyo
+${PYSITELIB}/sklearn/cluster/_hierarchical_fast.pxd
${PYSITELIB}/sklearn/cluster/_hierarchical_fast.so
${PYSITELIB}/sklearn/cluster/_k_means_common.pxd
${PYSITELIB}/sklearn/cluster/_k_means_common.so
@@ -130,6 +141,9 @@ ${PYSITELIB}/sklearn/cluster/tests/test_
${PYSITELIB}/sklearn/cluster/tests/test_feature_agglomeration.py
${PYSITELIB}/sklearn/cluster/tests/test_feature_agglomeration.pyc
${PYSITELIB}/sklearn/cluster/tests/test_feature_agglomeration.pyo
+${PYSITELIB}/sklearn/cluster/tests/test_hdbscan.py
+${PYSITELIB}/sklearn/cluster/tests/test_hdbscan.pyc
+${PYSITELIB}/sklearn/cluster/tests/test_hdbscan.pyo
${PYSITELIB}/sklearn/cluster/tests/test_hierarchical.py
${PYSITELIB}/sklearn/cluster/tests/test_hierarchical.pyc
${PYSITELIB}/sklearn/cluster/tests/test_hierarchical.pyo
@@ -699,9 +713,6 @@ ${PYSITELIB}/sklearn/externals/__init__.
${PYSITELIB}/sklearn/externals/_arff.py
${PYSITELIB}/sklearn/externals/_arff.pyc
${PYSITELIB}/sklearn/externals/_arff.pyo
-${PYSITELIB}/sklearn/externals/_lobpcg.py
-${PYSITELIB}/sklearn/externals/_lobpcg.pyc
-${PYSITELIB}/sklearn/externals/_lobpcg.pyo
${PYSITELIB}/sklearn/externals/_packaging/__init__.py
${PYSITELIB}/sklearn/externals/_packaging/__init__.pyc
${PYSITELIB}/sklearn/externals/_packaging/__init__.pyo
@@ -1085,6 +1096,7 @@ ${PYSITELIB}/sklearn/metrics/_pairwise_d
${PYSITELIB}/sklearn/metrics/_pairwise_distances_reduction/__init__.pyo
${PYSITELIB}/sklearn/metrics/_pairwise_distances_reduction/_argkmin.pxd
${PYSITELIB}/sklearn/metrics/_pairwise_distances_reduction/_argkmin.so
+${PYSITELIB}/sklearn/metrics/_pairwise_distances_reduction/_argkmin_classmode.so
${PYSITELIB}/sklearn/metrics/_pairwise_distances_reduction/_base.pxd
${PYSITELIB}/sklearn/metrics/_pairwise_distances_reduction/_base.so
${PYSITELIB}/sklearn/metrics/_pairwise_distances_reduction/_datasets_pair.pxd
@@ -1100,9 +1112,6 @@ ${PYSITELIB}/sklearn/metrics/_pairwise_f
${PYSITELIB}/sklearn/metrics/_plot/__init__.py
${PYSITELIB}/sklearn/metrics/_plot/__init__.pyc
${PYSITELIB}/sklearn/metrics/_plot/__init__.pyo
-${PYSITELIB}/sklearn/metrics/_plot/base.py
-${PYSITELIB}/sklearn/metrics/_plot/base.pyc
-${PYSITELIB}/sklearn/metrics/_plot/base.pyo
${PYSITELIB}/sklearn/metrics/_plot/confusion_matrix.py
${PYSITELIB}/sklearn/metrics/_plot/confusion_matrix.pyc
${PYSITELIB}/sklearn/metrics/_plot/confusion_matrix.pyo
@@ -1121,9 +1130,6 @@ ${PYSITELIB}/sklearn/metrics/_plot/roc_c
${PYSITELIB}/sklearn/metrics/_plot/tests/__init__.py
${PYSITELIB}/sklearn/metrics/_plot/tests/__init__.pyc
${PYSITELIB}/sklearn/metrics/_plot/tests/__init__.pyo
-${PYSITELIB}/sklearn/metrics/_plot/tests/test_base.py
-${PYSITELIB}/sklearn/metrics/_plot/tests/test_base.pyc
-${PYSITELIB}/sklearn/metrics/_plot/tests/test_base.pyo
${PYSITELIB}/sklearn/metrics/_plot/tests/test_common_curve_display.py
${PYSITELIB}/sklearn/metrics/_plot/tests/test_common_curve_display.pyc
${PYSITELIB}/sklearn/metrics/_plot/tests/test_common_curve_display.pyo
@@ -1291,9 +1297,6 @@ ${PYSITELIB}/sklearn/neighbors/_base.pyo
${PYSITELIB}/sklearn/neighbors/_classification.py
${PYSITELIB}/sklearn/neighbors/_classification.pyc
${PYSITELIB}/sklearn/neighbors/_classification.pyo
-${PYSITELIB}/sklearn/neighbors/_distance_metric.py
-${PYSITELIB}/sklearn/neighbors/_distance_metric.pyc
-${PYSITELIB}/sklearn/neighbors/_distance_metric.pyo
${PYSITELIB}/sklearn/neighbors/_graph.py
${PYSITELIB}/sklearn/neighbors/_graph.pyc
${PYSITELIB}/sklearn/neighbors/_graph.pyo
@@ -1411,6 +1414,10 @@ ${PYSITELIB}/sklearn/preprocessing/_labe
${PYSITELIB}/sklearn/preprocessing/_polynomial.py
${PYSITELIB}/sklearn/preprocessing/_polynomial.pyc
${PYSITELIB}/sklearn/preprocessing/_polynomial.pyo
+${PYSITELIB}/sklearn/preprocessing/_target_encoder.py
+${PYSITELIB}/sklearn/preprocessing/_target_encoder.pyc
+${PYSITELIB}/sklearn/preprocessing/_target_encoder.pyo
+${PYSITELIB}/sklearn/preprocessing/_target_encoder_fast.so
${PYSITELIB}/sklearn/preprocessing/tests/__init__.py
${PYSITELIB}/sklearn/preprocessing/tests/__init__.pyc
${PYSITELIB}/sklearn/preprocessing/tests/__init__.pyo
@@ -1435,6 +1442,9 @@ ${PYSITELIB}/sklearn/preprocessing/tests
${PYSITELIB}/sklearn/preprocessing/tests/test_polynomial.py
${PYSITELIB}/sklearn/preprocessing/tests/test_polynomial.pyc
${PYSITELIB}/sklearn/preprocessing/tests/test_polynomial.pyo
+${PYSITELIB}/sklearn/preprocessing/tests/test_target_encoder.py
+${PYSITELIB}/sklearn/preprocessing/tests/test_target_encoder.pyc
+${PYSITELIB}/sklearn/preprocessing/tests/test_target_encoder.pyo
${PYSITELIB}/sklearn/random_projection.py
${PYSITELIB}/sklearn/random_projection.pyc
${PYSITELIB}/sklearn/random_projection.pyo
@@ -1532,9 +1542,15 @@ ${PYSITELIB}/sklearn/tests/test_kernel_a
${PYSITELIB}/sklearn/tests/test_kernel_ridge.py
${PYSITELIB}/sklearn/tests/test_kernel_ridge.pyc
${PYSITELIB}/sklearn/tests/test_kernel_ridge.pyo
+${PYSITELIB}/sklearn/tests/test_metadata_routing.py
+${PYSITELIB}/sklearn/tests/test_metadata_routing.pyc
+${PYSITELIB}/sklearn/tests/test_metadata_routing.pyo
${PYSITELIB}/sklearn/tests/test_metaestimators.py
${PYSITELIB}/sklearn/tests/test_metaestimators.pyc
${PYSITELIB}/sklearn/tests/test_metaestimators.pyo
+${PYSITELIB}/sklearn/tests/test_metaestimators_metadata_routing.py
+${PYSITELIB}/sklearn/tests/test_metaestimators_metadata_routing.pyc
+${PYSITELIB}/sklearn/tests/test_metaestimators_metadata_routing.pyo
${PYSITELIB}/sklearn/tests/test_min_dependencies_readme.py
${PYSITELIB}/sklearn/tests/test_min_dependencies_readme.pyc
${PYSITELIB}/sklearn/tests/test_min_dependencies_readme.pyo
@@ -1623,6 +1639,9 @@ ${PYSITELIB}/sklearn/utils/_logistic_sig
${PYSITELIB}/sklearn/utils/_mask.py
${PYSITELIB}/sklearn/utils/_mask.pyc
${PYSITELIB}/sklearn/utils/_mask.pyo
+${PYSITELIB}/sklearn/utils/_metadata_requests.py
+${PYSITELIB}/sklearn/utils/_metadata_requests.pyc
+${PYSITELIB}/sklearn/utils/_metadata_requests.pyo
${PYSITELIB}/sklearn/utils/_mocking.py
${PYSITELIB}/sklearn/utils/_mocking.pyc
${PYSITELIB}/sklearn/utils/_mocking.pyo
@@ -1631,12 +1650,17 @@ ${PYSITELIB}/sklearn/utils/_openmp_helpe
${PYSITELIB}/sklearn/utils/_param_validation.py
${PYSITELIB}/sklearn/utils/_param_validation.pyc
${PYSITELIB}/sklearn/utils/_param_validation.pyo
+${PYSITELIB}/sklearn/utils/_plotting.py
+${PYSITELIB}/sklearn/utils/_plotting.pyc
+${PYSITELIB}/sklearn/utils/_plotting.pyo
${PYSITELIB}/sklearn/utils/_pprint.py
${PYSITELIB}/sklearn/utils/_pprint.pyc
${PYSITELIB}/sklearn/utils/_pprint.pyo
${PYSITELIB}/sklearn/utils/_random.pxd
${PYSITELIB}/sklearn/utils/_random.so
-${PYSITELIB}/sklearn/utils/_readonly_array_wrapper.so
+${PYSITELIB}/sklearn/utils/_response.py
+${PYSITELIB}/sklearn/utils/_response.pyc
+${PYSITELIB}/sklearn/utils/_response.pyo
${PYSITELIB}/sklearn/utils/_seq_dataset.pxd
${PYSITELIB}/sklearn/utils/_seq_dataset.so
${PYSITELIB}/sklearn/utils/_set_output.py
@@ -1681,6 +1705,9 @@ ${PYSITELIB}/sklearn/utils/fixes.pyo
${PYSITELIB}/sklearn/utils/graph.py
${PYSITELIB}/sklearn/utils/graph.pyc
${PYSITELIB}/sklearn/utils/graph.pyo
+${PYSITELIB}/sklearn/utils/metadata_routing.py
+${PYSITELIB}/sklearn/utils/metadata_routing.pyc
+${PYSITELIB}/sklearn/utils/metadata_routing.pyo
${PYSITELIB}/sklearn/utils/metaestimators.py
${PYSITELIB}/sklearn/utils/metaestimators.pyc
${PYSITELIB}/sklearn/utils/metaestimators.pyo
@@ -1720,6 +1747,9 @@ ${PYSITELIB}/sklearn/utils/tests/test_ar
${PYSITELIB}/sklearn/utils/tests/test_arrayfuncs.py
${PYSITELIB}/sklearn/utils/tests/test_arrayfuncs.pyc
${PYSITELIB}/sklearn/utils/tests/test_arrayfuncs.pyo
+${PYSITELIB}/sklearn/utils/tests/test_bunch.py
+${PYSITELIB}/sklearn/utils/tests/test_bunch.pyc
+${PYSITELIB}/sklearn/utils/tests/test_bunch.pyo
${PYSITELIB}/sklearn/utils/tests/test_class_weight.py
${PYSITELIB}/sklearn/utils/tests/test_class_weight.pyc
${PYSITELIB}/sklearn/utils/tests/test_class_weight.pyo
@@ -1774,15 +1804,18 @@ ${PYSITELIB}/sklearn/utils/tests/test_pa
${PYSITELIB}/sklearn/utils/tests/test_param_validation.py
${PYSITELIB}/sklearn/utils/tests/test_param_validation.pyc
${PYSITELIB}/sklearn/utils/tests/test_param_validation.pyo
+${PYSITELIB}/sklearn/utils/tests/test_plotting.py
+${PYSITELIB}/sklearn/utils/tests/test_plotting.pyc
+${PYSITELIB}/sklearn/utils/tests/test_plotting.pyo
${PYSITELIB}/sklearn/utils/tests/test_pprint.py
${PYSITELIB}/sklearn/utils/tests/test_pprint.pyc
${PYSITELIB}/sklearn/utils/tests/test_pprint.pyo
${PYSITELIB}/sklearn/utils/tests/test_random.py
${PYSITELIB}/sklearn/utils/tests/test_random.pyc
${PYSITELIB}/sklearn/utils/tests/test_random.pyo
-${PYSITELIB}/sklearn/utils/tests/test_readonly_wrapper.py
-${PYSITELIB}/sklearn/utils/tests/test_readonly_wrapper.pyc
-${PYSITELIB}/sklearn/utils/tests/test_readonly_wrapper.pyo
+${PYSITELIB}/sklearn/utils/tests/test_response.py
+${PYSITELIB}/sklearn/utils/tests/test_response.pyc
+${PYSITELIB}/sklearn/utils/tests/test_response.pyo
${PYSITELIB}/sklearn/utils/tests/test_seq_dataset.py
${PYSITELIB}/sklearn/utils/tests/test_seq_dataset.pyc
${PYSITELIB}/sklearn/utils/tests/test_seq_dataset.pyo
@@ -1807,6 +1840,9 @@ ${PYSITELIB}/sklearn/utils/tests/test_ta
${PYSITELIB}/sklearn/utils/tests/test_testing.py
${PYSITELIB}/sklearn/utils/tests/test_testing.pyc
${PYSITELIB}/sklearn/utils/tests/test_testing.pyo
+${PYSITELIB}/sklearn/utils/tests/test_typedefs.py
+${PYSITELIB}/sklearn/utils/tests/test_typedefs.pyc
+${PYSITELIB}/sklearn/utils/tests/test_typedefs.pyo
${PYSITELIB}/sklearn/utils/tests/test_utils.py
${PYSITELIB}/sklearn/utils/tests/test_utils.pyc
${PYSITELIB}/sklearn/utils/tests/test_utils.pyo
Index: pkgsrc/math/py-scikit-learn/distinfo
diff -u pkgsrc/math/py-scikit-learn/distinfo:1.10 pkgsrc/math/py-scikit-learn/distinfo:1.11
--- pkgsrc/math/py-scikit-learn/distinfo:1.10 Tue May 9 08:07:34 2023
+++ pkgsrc/math/py-scikit-learn/distinfo Mon Jul 17 19:51:04 2023
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.10 2023/05/09 08:07:34 adam Exp $
+$NetBSD: distinfo,v 1.11 2023/07/17 19:51:04 adam Exp $
-BLAKE2s (scikit-learn-1.2.2.tar.gz) = 4a5c5f003b2d60739eaf67a27c4dd977e0db244ea74a912fad3dba0d56f69269
-SHA512 (scikit-learn-1.2.2.tar.gz) = 73ebcd49f49607cefbd4c2200e9379ab1b1277067d0a10c09d80e3969d4924506ef90d52ad3173cf1e05268ad4c7812218b2e955798ac123bb078ff08330309e
-Size (scikit-learn-1.2.2.tar.gz) = 7269934 bytes
+BLAKE2s (scikit-learn-1.3.0.tar.gz) = 45627d763603b1811c8b0058e2881b6043b73f54b9518bcd50c48ebe80dd4f60
+SHA512 (scikit-learn-1.3.0.tar.gz) = 8fc58812750e68b3b3160fdc46f8d485e9584f3bf33470b840fc69d1dfbe3f5b29849bc010e92a0375f109e8e367f9599a4e19accc9f26aca609f6088c77c741
+Size (scikit-learn-1.3.0.tar.gz) = 7483039 bytes
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