CVS commit: pkgsrc/math/R-insight

["Makoto Fujiwara" <mef%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   mef
Date:           Sat Jul  8 04:31:43 UTC 2023

Modified Files:
        pkgsrc/math/R-insight: Makefile distinfo

Log Message:
(math/R-insight) Updated 0.19.2 to 0.19.3

# insight 0.19.3

## Breaking changes

* `standardize_column_order()` has changed the position when re-ordering Bayes
  factors, ROPEs and ESS / Rhat (mainly relevant for Bayesian models).

## Changes to functions

* `standardize_names()` and `standardize_column_order()` now also recognize the
  `"response.level"` column name.

* `get_data()` for _lavaan_ models is now more stable at retrieving model data
  when this is not available in the environment.

* `find_terms()` gets an `as_term_labels` argument, to extract model terms
  from the formula's `"term.labels"` attribute. This is closer to the behaviour
  of `stats::terms()`, but may be insufficient, e.g. for mixed models.

## Bug fixes

* `get_random()` now returns the same observations as `get_data()` and correctly
  removes missing values from the data before returning it.

* `find_parameters()` for marginal effects ignores the `"s.value"` column (which
  was added in a recent update).

* Fixed issue in `get_response()` for _brms_ models with `trunc()` function in
  the response variable.


To generate a diff of this commit:
cvs rdiff -u -r1.3 -r1.4 pkgsrc/math/R-insight/Makefile
cvs rdiff -u -r1.5 -r1.6 pkgsrc/math/R-insight/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/math/R-insight/Makefile
diff -u pkgsrc/math/R-insight/Makefile:1.3 pkgsrc/math/R-insight/Makefile:1.4
--- pkgsrc/math/R-insight/Makefile:1.3  Thu Jun 15 12:53:56 2023
+++ pkgsrc/math/R-insight/Makefile      Sat Jul  8 04:31:42 2023
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.3 2023/06/15 12:53:56 mef Exp $
+# $NetBSD: Makefile,v 1.4 2023/07/08 04:31:42 mef Exp $
 
 R_PKGNAME=     insight
-R_PKGVER=      0.19.2
+R_PKGVER=      0.19.3
 
 MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
 COMMENT=       Easy Access to Model Information for Various Model Objects
@@ -9,17 +9,17 @@ LICENSE=      gnu-gpl-v3
 
 # Packages suggested but not available:
 #   'AER', 'afex', 'aod', 'BayesFactor', 'bayestestR', 'betareg', 'bife',
-#   'biglm', 'blavaan', 'blme', 'brms', 'censReg', 'cgam',
-#   'clubSandwich', 'coxme', 'cplm', 'crch', 'datawizard', 'effectsize',
-#   'emmeans', 'epiR', 'estimatr', 'feisr', 'fixest', 'fungible', 'gam',
-#   'gamlss', 'gamm4', 'gbm', 'gee', 'geepack', 'GLMMadaptive',
-#   'glmmTMB', 'gmnl', 'gt', 'ivreg', 'JM', 'lavaan', 'lfe', 'lmerTest',
-#   'logistf', 'marginaleffects', 'mclust', 'MCMCglmm', 'merTools',
-#   'metaBMA', 'mice', 'mlogit', 'mhurdle', 'multgee', 'nonnest2',
-#   'ordinal', 'panelr', 'parameters', 'parsnip', 'pbkrtest',
+#   'biglm', 'blavaan', 'blme', 'brms', 'broom', 'car', 'carData',
+#   'censReg', 'cgam', 'clubSandwich', 'coxme', 'cplm', 'crch',
+#   'datawizard', 'effectsize', 'emmeans', 'epiR', 'estimatr', 'feisr',
+#   'fixest', 'fungible', 'gam', 'gamlss', 'gamlss.data', 'gamm4', 'gbm',
+#   'gee', 'geepack', 'geoR', 'GLMMadaptive', 'glmmTMB', 'gmnl', 'gt',
+#   'interp', 'ivreg', 'JM', 'lavaan', 'lavaSearch2', 'lfe', 'lmerTest',
+#   'MCMCglmm', 'merTools', 'metaBMA', 'metadat', 'metafor', 'metaplus',
+#   'mice', 'mlogit', 'mhurdle', 'mmrm', 'multgee', 'nestedLogit',
+#   'nonnest2', 'ordinal', 'parameters', 'parsnip', 'pbkrtest',
 #   'performance', 'plm', 'poorman', 'pscl', 'rms', 'robustlmm',
-#   'rstanarm', 'rstantools', 'speedglm', 'tripack', 'truncreg',
-#   'tweedie'
+#   'rstanarm', 'rstantools', 'speedglm', 'truncreg', 'tweedie', 'TMB'
 
 
 TEST_DEPENDS+= R-VGAM-[0-9]*:../../math/R-VGAM

Index: pkgsrc/math/R-insight/distinfo
diff -u pkgsrc/math/R-insight/distinfo:1.5 pkgsrc/math/R-insight/distinfo:1.6
--- pkgsrc/math/R-insight/distinfo:1.5  Thu Jun 15 12:53:56 2023
+++ pkgsrc/math/R-insight/distinfo      Sat Jul  8 04:31:42 2023
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.5 2023/06/15 12:53:56 mef Exp $
+$NetBSD: distinfo,v 1.6 2023/07/08 04:31:42 mef Exp $
 
-BLAKE2s (R/insight_0.19.2.tar.gz) = 27546bc02180e245ac4839c3c831f807e1efe13e610bb99f4c6447b3489b6e8c
-SHA512 (R/insight_0.19.2.tar.gz) = 05ca3c0552b6d33fb654c29c77379f546fd56836f853c919903298f840b07a2a02ab60c6f37d2a93a4e91fabe95b3c013b90e33910d3295069abf66857595839
-Size (R/insight_0.19.2.tar.gz) = 930723 bytes
+BLAKE2s (R/insight_0.19.3.tar.gz) = abdc782bfc14eca2cf8a1937e038fd37fd08001c3e1acb7e990028a152f18c04
+SHA512 (R/insight_0.19.3.tar.gz) = 34adfaa0756e164b3635da57df57de45bfaf1df277b243b4fa3df4c382a9a078f09b7e8ddb9537bd58dcecfd32b02f197296e96f2f5db2f8e0eb04bc41df445f
+Size (R/insight_0.19.3.tar.gz) = 932770 bytes