CVS commit: pkgsrc/math/R-compositions

["Makoto Fujiwara" <mef%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   mef
Date:           Sun Dec 18 11:46:11 UTC 2022

Modified Files:
        pkgsrc/math/R-compositions: Makefile distinfo

Log Message:
(math/R-compositions) Updated 2.0.2 to 2.0.4

Version 2.0-4

   * F77_ calling conventions adapted from fixed length strings to
     length parameter in BLAS calls
   * fitDirichlet returned loglikehood fixed (by adding a "-" in front
     of n)
   * as.matrix.rmult method returns now a matrix with the rmult class
     stripped; in this way, derivate functions of `lm()` work properly
     (e.g. `anova`, `summary.manova`, `MASS::lda`)

Version 2.0-3

  * kernel density estimation on the simplex with Dirichlet kernels
    (kdeDirichlet)

Version 2.0-2.9000
  * own implementation of dDirichlet


To generate a diff of this commit:
cvs rdiff -u -r1.2 -r1.3 pkgsrc/math/R-compositions/Makefile
cvs rdiff -u -r1.4 -r1.5 pkgsrc/math/R-compositions/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/math/R-compositions/Makefile
diff -u pkgsrc/math/R-compositions/Makefile:1.2 pkgsrc/math/R-compositions/Makefile:1.3
--- pkgsrc/math/R-compositions/Makefile:1.2     Sat Aug 28 05:30:45 2021
+++ pkgsrc/math/R-compositions/Makefile Sun Dec 18 11:46:11 2022
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.2 2021/08/28 05:30:45 mef Exp $
+# $NetBSD: Makefile,v 1.3 2022/12/18 11:46:11 mef Exp $
 
 R_PKGNAME=     compositions
-R_PKGVER=      2.0-2
+R_PKGVER=      2.0-4
 
 MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
 COMMENT=       Compositional data analysis
@@ -12,9 +12,9 @@ DEPENDS+=     R-energy>=1.7.6:../../math/R-e
 DEPENDS+=      R-robustbase>=0.93.5:../../math/R-robustbase
 DEPENDS+=      R-tensorA>=0.36.1:../../math/R-tensorA
 
-# Packages suggested but not available: 'rgl', 'combinat'
+# Packages suggested but not available: 'rgl'
 #TEST_DEPENDS+=        R-rgl-[0-9]*:../..
-#TEST_DEPENDS+=        R-combinat-[0-9]*:../..
+TEST_DEPENDS+= R-combinat-[0-9]*:../../math/R-combinat
 
 USE_LANGUAGES= c fortran
 

Index: pkgsrc/math/R-compositions/distinfo
diff -u pkgsrc/math/R-compositions/distinfo:1.4 pkgsrc/math/R-compositions/distinfo:1.5
--- pkgsrc/math/R-compositions/distinfo:1.4     Tue Oct 26 10:55:25 2021
+++ pkgsrc/math/R-compositions/distinfo Sun Dec 18 11:46:11 2022
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.4 2021/10/26 10:55:25 nia Exp $
+$NetBSD: distinfo,v 1.5 2022/12/18 11:46:11 mef Exp $
 
-BLAKE2s (R/compositions_2.0-2.tar.gz) = 9cb6cc8c8fd38069695893257878fb7d5e6e7a640b60dc296b9e8fcfd6b2c379
-SHA512 (R/compositions_2.0-2.tar.gz) = f3484aeba165891a39cec95d5eb700d475e71f7bde063bc223fb88642b582897599a4480c75cbc43722437fd907a6565f1a58694f4b99a37d676d4cda5a5c867
-Size (R/compositions_2.0-2.tar.gz) = 1168643 bytes
+BLAKE2s (R/compositions_2.0-4.tar.gz) = 655e6d6c12957d129682377e0ab09a933e2f5022dfb41d05492a2c20fec28c25
+SHA512 (R/compositions_2.0-4.tar.gz) = 5ccba3ce12461ff3d7fdda8e2956ed2eaed6a029911a31c11c375c40c1b2696b3601d62a07b07f7695b408181b286be251e5530d2934249d1586024c1ea92944
+Size (R/compositions_2.0-4.tar.gz) = 1175066 bytes