CVS commit: pkgsrc/biology/fasda

["Jason Bacon" <bacon%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   bacon
Date:           Mon Dec 12 18:28:42 UTC 2022

Added Files:
        pkgsrc/biology/fasda: DESCR Makefile PLIST distinfo

Log Message:
biology/fasda: Fast and simple differential analysis

FASDA aims to provide a fast and simple differential analysis tool
that just works and does not require any knowledge beyond basic Unix
command-line skills. The code is written entirely in C to maximize
efficiency and portability, and to provide a simple command-line user
interface.


To generate a diff of this commit:
cvs rdiff -u -r0 -r1.1 pkgsrc/biology/fasda/DESCR \
    pkgsrc/biology/fasda/Makefile pkgsrc/biology/fasda/PLIST \
    pkgsrc/biology/fasda/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Added files:

Index: pkgsrc/biology/fasda/DESCR
diff -u /dev/null pkgsrc/biology/fasda/DESCR:1.1
--- /dev/null   Mon Dec 12 18:28:42 2022
+++ pkgsrc/biology/fasda/DESCR  Mon Dec 12 18:28:42 2022
@@ -0,0 +1,5 @@
+FASDA aims to provide a fast and simple differential analysis tool
+that just works and does not require any knowledge beyond basic Unix
+command-line skills. The code is written entirely in C to maximize
+efficiency and portability, and to provide a simple command-line user
+interface.
Index: pkgsrc/biology/fasda/Makefile
diff -u /dev/null pkgsrc/biology/fasda/Makefile:1.1
--- /dev/null   Mon Dec 12 18:28:42 2022
+++ pkgsrc/biology/fasda/Makefile       Mon Dec 12 18:28:42 2022
@@ -0,0 +1,18 @@
+# $NetBSD: Makefile,v 1.1 2022/12/12 18:28:42 bacon Exp $
+
+DISTNAME=      fasda-0.1.2
+CATEGORIES=    biology
+MASTER_SITES=  ${MASTER_SITE_GITHUB:=auerlab/}
+
+MAINTAINER=    bacon%NetBSD.org@localhost
+HOMEPAGE=      https://github.com/auerlab/fasda
+COMMENT=       Fast and simple differential analysis
+LICENSE=       2-clause-bsd
+
+LDFLAGS.SunOS+=        -lresolv
+
+pre-build:
+       cd ${WRKSRC} && make depend PREFIX=${PREFIX}
+
+.include "../../biology/biolibc/buildlink3.mk"
+.include "../../mk/bsd.pkg.mk"
Index: pkgsrc/biology/fasda/PLIST
diff -u /dev/null pkgsrc/biology/fasda/PLIST:1.1
--- /dev/null   Mon Dec 12 18:28:42 2022
+++ pkgsrc/biology/fasda/PLIST  Mon Dec 12 18:28:42 2022
@@ -0,0 +1,11 @@
+@comment $NetBSD: PLIST,v 1.1 2022/12/12 18:28:42 bacon Exp $
+bin/fasda
+libexec/fasda/abundance
+libexec/fasda/fold-change
+libexec/fasda/normalize
+libexec/fasda/pval-sim
+man/man1/fasda-abundance.1
+man/man1/fasda-fold-change.1
+man/man1/fasda-normalize.1
+man/man1/fasda-pval-sim.1
+man/man1/fasda.1
Index: pkgsrc/biology/fasda/distinfo
diff -u /dev/null pkgsrc/biology/fasda/distinfo:1.1
--- /dev/null   Mon Dec 12 18:28:42 2022
+++ pkgsrc/biology/fasda/distinfo       Mon Dec 12 18:28:42 2022
@@ -0,0 +1,5 @@
+$NetBSD: distinfo,v 1.1 2022/12/12 18:28:42 bacon Exp $
+
+BLAKE2s (fasda-0.1.2.tar.gz) = 5c226192fb08fe7a4aca39aafc0305ec7c64bee2f20f167fe45610a3df9c754a
+SHA512 (fasda-0.1.2.tar.gz) = 0ced651822c3cd0f079cb6d2eda4acbe1a7383622dbe7b2a4b2155943fb64979b80241a2e711a10c9362407ec262a3ff8cb32a1e495695d1c8df139902c7ba6d
+Size (fasda-0.1.2.tar.gz) = 57295 bytes