CVS commit: pkgsrc/biology/vcf2hap

["Jason Bacon" <bacon%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   bacon
Date:           Tue Dec 14 19:12:10 UTC 2021

Modified Files:
        pkgsrc/biology/vcf2hap: Makefile PLIST distinfo

Log Message:
biology/vcf2hap: Update to 0.1.4

Updates for evolving libxtend and biolibc APIs
Add --version flag


To generate a diff of this commit:
cvs rdiff -u -r1.3 -r1.4 pkgsrc/biology/vcf2hap/Makefile \
    pkgsrc/biology/vcf2hap/PLIST
cvs rdiff -u -r1.5 -r1.6 pkgsrc/biology/vcf2hap/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/vcf2hap/Makefile
diff -u pkgsrc/biology/vcf2hap/Makefile:1.3 pkgsrc/biology/vcf2hap/Makefile:1.4
--- pkgsrc/biology/vcf2hap/Makefile:1.3 Sat Aug 28 18:40:06 2021
+++ pkgsrc/biology/vcf2hap/Makefile     Tue Dec 14 19:12:10 2021
@@ -1,21 +1,21 @@
-# $NetBSD: Makefile,v 1.3 2021/08/28 18:40:06 bacon Exp $
+# $NetBSD: Makefile,v 1.4 2021/12/14 19:12:10 bacon Exp $
 
-DISTNAME=      vcf2hap-0.1.3.12
+DISTNAME=      vcf2hap-0.1.4
 CATEGORIES=    biology
 MASTER_SITES=  ${MASTER_SITE_GITHUB:=auerlab/}
-GITHUB_TAG=    3626f5a320be8176d359b487682385fa6ab0f197
 
 MAINTAINER=    bacon%NetBSD.org@localhost
 HOMEPAGE=      https://github.com/auerlab/vcf2hap
 COMMENT=       Generate .hap file from VCF for haplohseq
 LICENSE=       2-clause-bsd
 
+MAKE_ENV+=     VERSION=${PKGVERSION}
+
 pre-build:
        cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend
 
 do-test:
        cd ${WRKSRC}/Test && ./run-test.sh
 
-.include "../../devel/libxtend/buildlink3.mk"
 .include "../../biology/biolibc/buildlink3.mk"
 .include "../../mk/bsd.pkg.mk"
Index: pkgsrc/biology/vcf2hap/PLIST
diff -u pkgsrc/biology/vcf2hap/PLIST:1.3 pkgsrc/biology/vcf2hap/PLIST:1.4
--- pkgsrc/biology/vcf2hap/PLIST:1.3    Sat Aug 28 18:40:06 2021
+++ pkgsrc/biology/vcf2hap/PLIST        Tue Dec 14 19:12:10 2021
@@ -1,3 +1,3 @@
-@comment $NetBSD: PLIST,v 1.3 2021/08/28 18:40:06 bacon Exp $
+@comment $NetBSD: PLIST,v 1.4 2021/12/14 19:12:10 bacon Exp $
 bin/vcf2hap
 man/man1/vcf2hap.1

Index: pkgsrc/biology/vcf2hap/distinfo
diff -u pkgsrc/biology/vcf2hap/distinfo:1.5 pkgsrc/biology/vcf2hap/distinfo:1.6
--- pkgsrc/biology/vcf2hap/distinfo:1.5 Tue Oct 26 10:03:44 2021
+++ pkgsrc/biology/vcf2hap/distinfo     Tue Dec 14 19:12:10 2021
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.5 2021/10/26 10:03:44 nia Exp $
+$NetBSD: distinfo,v 1.6 2021/12/14 19:12:10 bacon Exp $
 
-BLAKE2s (vcf2hap-0.1.3.12-3626f5a320be8176d359b487682385fa6ab0f197.tar.gz) = 5e788267ecd889c6c9918c7628ce114a5873897a0f2d96fddf5b3d70bb69d0a1
-SHA512 (vcf2hap-0.1.3.12-3626f5a320be8176d359b487682385fa6ab0f197.tar.gz) = 
b97e7fb8bf13f03a90248d8002c46546e0932c1463b6fe4480454b9643de4695ca82f7c49a5ab8ef86e6eb4a931bf6e588334998edfeb29a5fc67b379a927ebb
-Size (vcf2hap-0.1.3.12-3626f5a320be8176d359b487682385fa6ab0f197.tar.gz) = 200650 bytes
+BLAKE2s (vcf2hap-0.1.4.tar.gz) = 7d624c130972b7f78550ad527d3e6829aa382e0d04350e95b0500a10b32871fa
+SHA512 (vcf2hap-0.1.4.tar.gz) = 2fe7b20f55ba40854d52851a223f1357c3d795860720924b2b8134914361f2e3b396daaacbc9286dc691c83ca144858586f7792d0472c1880c810a11b5c0ee48
+Size (vcf2hap-0.1.4.tar.gz) = 200812 bytes