CVS commit: pkgsrc/biology/vcf-split

["Jason Bacon" <bacon%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   bacon
Date:           Tue Dec 14 19:10:43 UTC 2021

Modified Files:
        pkgsrc/biology/vcf-split: Makefile PLIST distinfo

Log Message:
biology/vcf-split: Update to 0.1.3.3

Transfer header from multi-sample input
Updates for evolving libxtend and biolibc APIs
Add --version flag
Numerous minor fixes and enhancements


To generate a diff of this commit:
cvs rdiff -u -r1.3 -r1.4 pkgsrc/biology/vcf-split/Makefile \
    pkgsrc/biology/vcf-split/PLIST
cvs rdiff -u -r1.5 -r1.6 pkgsrc/biology/vcf-split/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/vcf-split/Makefile
diff -u pkgsrc/biology/vcf-split/Makefile:1.3 pkgsrc/biology/vcf-split/Makefile:1.4
--- pkgsrc/biology/vcf-split/Makefile:1.3       Sat Aug 28 18:39:37 2021
+++ pkgsrc/biology/vcf-split/Makefile   Tue Dec 14 19:10:43 2021
@@ -1,18 +1,19 @@
-# $NetBSD: Makefile,v 1.3 2021/08/28 18:39:37 bacon Exp $
+# $NetBSD: Makefile,v 1.4 2021/12/14 19:10:43 bacon Exp $
 
-DISTNAME=      vcf-split-0.1.2.14
+DISTNAME=      vcf-split-0.1.3.3
 CATEGORIES=    biology
 MASTER_SITES=  ${MASTER_SITE_GITHUB:=auerlab/}
-GITHUB_TAG=    bc2eba0b5d5f41443795d7bd465569ba5da27315
+GITHUB_TAG=    19713a4e0f739840335ced2e170b822398688146
 
 MAINTAINER=    bacon%NetBSD.org@localhost
 HOMEPAGE=      https://github.com/auerlab/vcf-split
 COMMENT=       Split a multi-sample VCF into single-sample VCFs
 LICENSE=       2-clause-bsd
 
+MAKE_ENV+=     VERSION=${PKGVERSION}
+
 pre-build:
        cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend
 
-.include "../../devel/libxtend/buildlink3.mk"
 .include "../../biology/biolibc/buildlink3.mk"
 .include "../../mk/bsd.pkg.mk"
Index: pkgsrc/biology/vcf-split/PLIST
diff -u pkgsrc/biology/vcf-split/PLIST:1.3 pkgsrc/biology/vcf-split/PLIST:1.4
--- pkgsrc/biology/vcf-split/PLIST:1.3  Sat Aug 28 18:39:37 2021
+++ pkgsrc/biology/vcf-split/PLIST      Tue Dec 14 19:10:43 2021
@@ -1,3 +1,3 @@
-@comment $NetBSD: PLIST,v 1.3 2021/08/28 18:39:37 bacon Exp $
+@comment $NetBSD: PLIST,v 1.4 2021/12/14 19:10:43 bacon Exp $
 bin/vcf-split
 man/man1/vcf-split.1

Index: pkgsrc/biology/vcf-split/distinfo
diff -u pkgsrc/biology/vcf-split/distinfo:1.5 pkgsrc/biology/vcf-split/distinfo:1.6
--- pkgsrc/biology/vcf-split/distinfo:1.5       Tue Oct 26 10:03:44 2021
+++ pkgsrc/biology/vcf-split/distinfo   Tue Dec 14 19:10:43 2021
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.5 2021/10/26 10:03:44 nia Exp $
+$NetBSD: distinfo,v 1.6 2021/12/14 19:10:43 bacon Exp $
 
-BLAKE2s (vcf-split-0.1.2.14-bc2eba0b5d5f41443795d7bd465569ba5da27315.tar.gz) = 0eb99f0d170977fa72cc6966d6c87cb46a96cf6593af3cbca89005ad518dbe8b
-SHA512 (vcf-split-0.1.2.14-bc2eba0b5d5f41443795d7bd465569ba5da27315.tar.gz) = 
fd9481bf9d92967261006bd844b3408f2c33d999a314bd702701da589904bf1322e33723cb26f3753e38a640cc28ffaadabda2ca46a5423c2ac65a020da7aad2
-Size (vcf-split-0.1.2.14-bc2eba0b5d5f41443795d7bd465569ba5da27315.tar.gz) = 16161 bytes
+BLAKE2s (vcf-split-0.1.3.3-19713a4e0f739840335ced2e170b822398688146.tar.gz) = 264396b433ffa50610ff6314b2b8d6c063aadbdb412d7de1066d53f34ed8e912
+SHA512 (vcf-split-0.1.3.3-19713a4e0f739840335ced2e170b822398688146.tar.gz) = 
bc64752c1a021509c40a9aa5229de77c239253be28828b2512fbd5d1be436ab372c052c4411915db8495ca47071e7eda538b35b4278bc37aa5fa440e8caed5a9
+Size (vcf-split-0.1.3.3-19713a4e0f739840335ced2e170b822398688146.tar.gz) = 21921 bytes