CVS commit: pkgsrc/math/R-car

["Makoto Fujiwara" <mef%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   mef
Date:           Sat Sep 11 12:31:42 UTC 2021

Modified Files:
        pkgsrc/math/R-car: Makefile distinfo

Log Message:
(math/R-car) Updated 3.0.10 to 3.0.11

Changes to Version 3.0-11

  o boxCox() function now allows the use of any of the usual graphics
    parameters in the plot() function.  If particuar boxCox(model,
    main="my title") will add a title to the plot, and boxCox(model,
    main="") will suppress it.

  o car::Boot(object, method="residual") will work for
    method="residual" only if the car package has been previously
    attached via either library(car) or require(car).

  o Added error checking with vcov. argument.  Changed vcov.boot to
    print a warning of bootstrap replicates that returned NA

  o Introduced brief.tbl(), which simply calls print(), to cope with
    changes to tibbles.

  o qqPlot() fills (shades) confidence envelopes by default, and
    smoothers for scatterplots fill variance (spread) envelopes by
    default (suggestions of Michael Friendly).

  o Fixed problem in infIndexPlot.influence.lme() (reported by Francis
    L. Huang).

  o New "polr" and "svyolr" methods for vif() (following report by
    Abra Jeffers).

  o Make linearHypothesis() and Anova() work with "svyolr" objects via
    their default methods.

  o Regularize handling of vcov. argument in Anova() and
    linearHypothesis().

  o vcov. argument now works with Anova() for models produced by
    lme4::lmer() and glmer(), (fixing a bug reported by Amy MacDougall).

  o New linearHypothesis.lmList() method.

  o New "lm" method for symbox().

  o New cex and pt.wts arguments for avPlot() "lm" and "glm" methods,
    and for mcPlot.lm().

  o Fix handling of imatrix argument to Anova.mlm() (suggestion of
    Benedikt Langenberg).

  o Remove influence.merMod() and related methods in favor of versions
    of these methods in the lme4 package.

  o Rewrite "embedding" vignette.

  o Small fixes and improvements.


To generate a diff of this commit:
cvs rdiff -u -r1.9 -r1.10 pkgsrc/math/R-car/Makefile
cvs rdiff -u -r1.8 -r1.9 pkgsrc/math/R-car/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/math/R-car/Makefile
diff -u pkgsrc/math/R-car/Makefile:1.9 pkgsrc/math/R-car/Makefile:1.10
--- pkgsrc/math/R-car/Makefile:1.9      Fri Oct  2 10:31:59 2020
+++ pkgsrc/math/R-car/Makefile  Sat Sep 11 12:31:42 2021
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.9 2020/10/02 10:31:59 wen Exp $
+# $NetBSD: Makefile,v 1.10 2021/09/11 12:31:42 mef Exp $
 
 R_PKGNAME=     car
-R_PKGVER=      3.0-10
+R_PKGVER=      3.0-11
 
 MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
 COMMENT=       Companion to 'Applied Regression'
@@ -16,8 +16,13 @@ DEPENDS+=    R-pbkrtest>=0.4.4:../../math/R
 DEPENDS+=      R-quantreg>=5.42.1:../../math/R-quantreg
 
 # Packages suggested but not available:
-#   'alr4', 'coxme', 'leaps', 'lmtest', 'rgl'
+#   'alr4', 'coxme', 'leaps', 'lmtest'
 TEST_DEPENDS+= R-lmtest-[0-9]*:../../math/R-lmtest
+TEST_DEPENDS+= R-effects-[0-9]*:../../graphics/R-effects
+TEST_DEPENDS+= R-knitr-[0-9]*:../../print/R-knitr
+TEST_DEPENDS+= R-rgl-[0-9]*:../../graphics/R-rgl
+TEST_DEPENDS+= R-sandwich-[0-9]*:../../math/R-sandwich
+TEST_DEPENDS+= R-lme4-[0-9]*:../../math/R-lme4
 
 USE_LANGUAGES= # none
 

Index: pkgsrc/math/R-car/distinfo
diff -u pkgsrc/math/R-car/distinfo:1.8 pkgsrc/math/R-car/distinfo:1.9
--- pkgsrc/math/R-car/distinfo:1.8      Fri Oct  2 10:31:59 2020
+++ pkgsrc/math/R-car/distinfo  Sat Sep 11 12:31:42 2021
@@ -1,6 +1,6 @@
-$NetBSD: distinfo,v 1.8 2020/10/02 10:31:59 wen Exp $
+$NetBSD: distinfo,v 1.9 2021/09/11 12:31:42 mef Exp $
 
-SHA1 (R/car_3.0-10.tar.gz) = 600c4ecc316c7b2ed5abff20bb8160c6a5b16939
-RMD160 (R/car_3.0-10.tar.gz) = 55b38e3890bd71b3b91bc8240ce06fdf0ce04fc4
-SHA512 (R/car_3.0-10.tar.gz) = 59e7f58e5f79c854402f15049ed1e36a8e62a1fd3279a3a27194619a61f8120826207290416695767672e7d962190c4a0676cb4f41edb8cf47e1e88fd78118e2
-Size (R/car_3.0-10.tar.gz) = 501293 bytes
+SHA1 (R/car_3.0-11.tar.gz) = 9bbc88254b3db5b30206067ceb617533ae6330b4
+RMD160 (R/car_3.0-11.tar.gz) = b62069028244752ff8e145ee83ba6d7ba2f7601a
+SHA512 (R/car_3.0-11.tar.gz) = 332878f8c6f07bfdac1fbe84fff2211ff8349b68b715b4b97a0a915a8d80e9b877e995bebf5e2b7059d3b2b2fb52bcab64ded6b4da28a88784628ace7f114ec4
+Size (R/car_3.0-11.tar.gz) = 490173 bytes