CVS commit: pkgsrc/math/R-e1071

["Wen Heping" <wen%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   wen
Date:           Fri Jan  1 12:03:03 UTC 2016

Modified Files:
        pkgsrc/math/R-e1071: Makefile distinfo

Log Message:
Update to 1.6.7

Upstream changes:
Changes in version 1.6-7

    fix some bug in handling weights in svm.default

Changes in version 1.6-6

    fix numeric issue in classAgreement()

    add functions from recommended packages to NAMESPACE

    fix bug in svm.default (incorrect handling of subset= argument)

    fix bug in predict.svm (new data with NA in response got removed)

    residuals are now correctly computed for regression in case of scaled data

Changes in version 1.6-5

    hamming.distance() no longer converts input to binary

    tune() now uses mean() to aggregate error measures from cross-fold replications

Changes in version 1.6-4

    remove library("SparseM") statements in code, use namespace semantics instead

    Fix memory leak and uninitialized read error in write.svm()

    add warning in predict.svm() if probabilities should be predicted, but the model was not trained with probability = TRUE

    add eps to laplace smoothing in predict.naiveBayes() to account for close-zero probabilities also.

    use R's random number generator for cross-validation and probability computation instead of the system one.

Changes in version 1.6-3

    remove require() statements and dependency on stats

Changes in version 1.6-2

    vignettes moved to vignettes folder.

    libsvm upgrade to version 3.17, getting rid of stdout and stderr


To generate a diff of this commit:
cvs rdiff -u -r1.4 -r1.5 pkgsrc/math/R-e1071/Makefile
cvs rdiff -u -r1.5 -r1.6 pkgsrc/math/R-e1071/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.