CVS commit: pkgsrc/biology

["Alistair G. Crooks" <agc%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   agc
Date:           Mon Nov  2 18:42:23 UTC 2015

Modified Files:
        pkgsrc/biology/arka: distinfo
        pkgsrc/biology/azara: distinfo
        pkgsrc/biology/bioperl: distinfo
        pkgsrc/biology/bodr: distinfo
        pkgsrc/biology/bwa: distinfo
        pkgsrc/biology/cdhit: distinfo
        pkgsrc/biology/chemical-mime-data: distinfo
        pkgsrc/biology/chemtool: distinfo
        pkgsrc/biology/clustalw: distinfo
        pkgsrc/biology/coalesce: distinfo
        pkgsrc/biology/fastDNAml: distinfo
        pkgsrc/biology/fluctuate: distinfo
        pkgsrc/biology/gabedit: distinfo
        pkgsrc/biology/genesplicer: distinfo
        pkgsrc/biology/glimmer: distinfo
        pkgsrc/biology/gnome-chemistry-utils: distinfo
        pkgsrc/biology/gp: distinfo
        pkgsrc/biology/gromacs: distinfo
        pkgsrc/biology/hmmer: distinfo
        pkgsrc/biology/lucy: distinfo
        pkgsrc/biology/mopac: distinfo
        pkgsrc/biology/mpqc: distinfo
        pkgsrc/biology/mummer: distinfo
        pkgsrc/biology/nut: distinfo
        pkgsrc/biology/openbabel: distinfo
        pkgsrc/biology/p5-Bio-ASN1-EntrezGene: distinfo
        pkgsrc/biology/pdbalign: distinfo
        pkgsrc/biology/phylip: distinfo
        pkgsrc/biology/plink: distinfo
        pkgsrc/biology/plinkseq: distinfo
        pkgsrc/biology/primer3: distinfo
        pkgsrc/biology/profit: distinfo
        pkgsrc/biology/puzzle: distinfo
        pkgsrc/biology/py-mol: distinfo
        pkgsrc/biology/rasmol: distinfo
        pkgsrc/biology/sewer: distinfo
        pkgsrc/biology/stride: distinfo
        pkgsrc/biology/xylem: distinfo

Log Message:
Add SHA512 digests for distfiles for biology category.

Existing SHA1 digests verified, all found to be the same on the
machine holding the existing distfiles (morden).  Existing SHA1
digests retained for now as an audit trail.


To generate a diff of this commit:
cvs rdiff -u -r1.1.1.1 -r1.2 pkgsrc/biology/arka/distinfo
cvs rdiff -u -r1.3 -r1.4 pkgsrc/biology/azara/distinfo
cvs rdiff -u -r1.6 -r1.7 pkgsrc/biology/bioperl/distinfo
cvs rdiff -u -r1.1.1.1 -r1.2 pkgsrc/biology/bodr/distinfo
cvs rdiff -u -r1.1 -r1.2 pkgsrc/biology/bwa/distinfo
cvs rdiff -u -r1.1 -r1.2 pkgsrc/biology/cdhit/distinfo
cvs rdiff -u -r1.1.1.1 -r1.2 pkgsrc/biology/chemical-mime-data/distinfo
cvs rdiff -u -r1.15 -r1.16 pkgsrc/biology/chemtool/distinfo
cvs rdiff -u -r1.7 -r1.8 pkgsrc/biology/clustalw/distinfo
cvs rdiff -u -r1.2 -r1.3 pkgsrc/biology/coalesce/distinfo
cvs rdiff -u -r1.4 -r1.5 pkgsrc/biology/fastDNAml/distinfo
cvs rdiff -u -r1.2 -r1.3 pkgsrc/biology/fluctuate/distinfo
cvs rdiff -u -r1.1.1.1 -r1.2 pkgsrc/biology/gabedit/distinfo
cvs rdiff -u -r1.4 -r1.5 pkgsrc/biology/genesplicer/distinfo
cvs rdiff -u -r1.4 -r1.5 pkgsrc/biology/glimmer/distinfo
cvs rdiff -u -r1.6 -r1.7 pkgsrc/biology/gnome-chemistry-utils/distinfo
cvs rdiff -u -r1.6 -r1.7 pkgsrc/biology/gp/distinfo
cvs rdiff -u -r1.10 -r1.11 pkgsrc/biology/gromacs/distinfo
cvs rdiff -u -r1.7 -r1.8 pkgsrc/biology/hmmer/distinfo
cvs rdiff -u -r1.4 -r1.5 pkgsrc/biology/lucy/distinfo
cvs rdiff -u -r1.1.1.1 -r1.2 pkgsrc/biology/mopac/distinfo
cvs rdiff -u -r1.2 -r1.3 pkgsrc/biology/mpqc/distinfo
cvs rdiff -u -r1.12 -r1.13 pkgsrc/biology/mummer/distinfo
cvs rdiff -u -r1.17 -r1.18 pkgsrc/biology/nut/distinfo
cvs rdiff -u -r1.6 -r1.7 pkgsrc/biology/openbabel/distinfo
cvs rdiff -u -r1.1 -r1.2 pkgsrc/biology/p5-Bio-ASN1-EntrezGene/distinfo
cvs rdiff -u -r1.2 -r1.3 pkgsrc/biology/pdbalign/distinfo
cvs rdiff -u -r1.6 -r1.7 pkgsrc/biology/phylip/distinfo
cvs rdiff -u -r1.2 -r1.3 pkgsrc/biology/plink/distinfo
cvs rdiff -u -r1.3 -r1.4 pkgsrc/biology/plinkseq/distinfo
cvs rdiff -u -r1.2 -r1.3 pkgsrc/biology/primer3/distinfo
cvs rdiff -u -r1.5 -r1.6 pkgsrc/biology/profit/distinfo
cvs rdiff -u -r1.6 -r1.7 pkgsrc/biology/puzzle/distinfo
cvs rdiff -u -r1.3 -r1.4 pkgsrc/biology/py-mol/distinfo
cvs rdiff -u -r1.5 -r1.6 pkgsrc/biology/rasmol/distinfo
cvs rdiff -u -r1.2 -r1.3 pkgsrc/biology/sewer/distinfo
cvs rdiff -u -r1.2 -r1.3 pkgsrc/biology/stride/distinfo
cvs rdiff -u -r1.3 -r1.4 pkgsrc/biology/xylem/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.