Subject: CVS commit: pkgsrc/biology/glimmer
To: None <pkgsrc-changes@NetBSD.org>
From: Jan Schaumann <jschauma@netbsd.org>
List: pkgsrc-changes
Date: 09/30/2003 02:11:06
Module Name:	pkgsrc
Committed By:	jschauma
Date:		Tue Sep 30 02:11:06 UTC 2003

Update of /cvsroot/pkgsrc/biology/glimmer
In directory ivanova.netbsd.org:/tmp/cvs-serv5088

Log Message:
Initial import of glimmer, one of the many packages provided by
brook at biology dot nmsu dot edu and his team at NMSU.

Glimmer (Gene Locator and Interpolated Markov Modeler) is a system for finding
genes in microbial DNA, especially the genomes of bacteria and archaea.
Glimmer uses interpolated Markov models (IMMs) to identify the coding regions
and  distinguish them from noncoding DNA. The IMM approach uses a combination
of Markov models from 1st through 8th-order, weighting each model according to
its predictive power. 


Vendor Tag:	TNF
Release Tags:	pkgsrc-base
		
N pkgsrc/biology/glimmer/Makefile
N pkgsrc/biology/glimmer/DESCR
N pkgsrc/biology/glimmer/PLIST
N pkgsrc/biology/glimmer/distinfo
N pkgsrc/biology/glimmer/patches/patch-aa

No conflicts created by this import