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[pkgsrc/trunk]: pkgsrc/math/py-scikit-image (math/py-scikit-image) Updated 0....



details:   https://anonhg.NetBSD.org/pkgsrc/rev/bec4e0cab3e6
branches:  trunk
changeset: 443712:bec4e0cab3e6
user:      mef <mef%pkgsrc.org@localhost>
date:      Sat Dec 19 15:42:07 2020 +0000

description:
(math/py-scikit-image) Updated 0.15.0 to 0.18.0

Release note is here:
  https://github.com/scikit-image/scikit-image/blob/master/doc/release/release_0.18.rst

(Note: the category should be graphics instead of math)

diffstat:

 math/py-scikit-image/Makefile |   13 +-
 math/py-scikit-image/PLIST    |  322 +++++++++++++++++++++++------------------
 math/py-scikit-image/distinfo |   10 +-
 3 files changed, 193 insertions(+), 152 deletions(-)

diffs (truncated from 765 to 300 lines):

diff -r c99539d6ca0a -r bec4e0cab3e6 math/py-scikit-image/Makefile
--- a/math/py-scikit-image/Makefile     Sat Dec 19 15:28:13 2020 +0000
+++ b/math/py-scikit-image/Makefile     Sat Dec 19 15:42:07 2020 +0000
@@ -1,8 +1,7 @@
-# $NetBSD: Makefile,v 1.5 2020/10/12 21:52:04 bacon Exp $
+# $NetBSD: Makefile,v 1.6 2020/12/19 15:42:07 mef Exp $
 
-DISTNAME=      scikit-image-0.15.0
+DISTNAME=      scikit-image-0.18.0
 PKGNAME=       ${PYPKGPREFIX}-${DISTNAME}
-PKGREVISION=   1
 CATEGORIES=    graphics python
 MASTER_SITES=  ${MASTER_SITE_PYPI:=s/scikit-image/}
 
@@ -11,9 +10,13 @@
 COMMENT=       Image processing routines for SciPy
 LICENSE=       modified-bsd
 
+BUILD_DEPENDS+=        ${PYPKGPREFIX}-cython>=0.29.21:../../devel/py-cython
+DEPENDS+=      ${PYPKGPREFIX}-numpy>=0.19.0:../../math/py-numpy
+DEPENDS+=      ${PYPKGPREFIX}-scipy>=1.0.1:../../math/py-scipy
+DEPENDS+=      ${PYPKGPREFIX}-matplotlib>=3.2.2:../../graphics/py-matplotlib
 DEPENDS+=      ${PYPKGPREFIX}-Pillow>=4.3.0:../../graphics/py-Pillow
-DEPENDS+=      ${PYPKGPREFIX}-imageio>=2.0.1:../../graphics/py-imageio
-DEPENDS+=      ${PYPKGPREFIX}-pywavelets>=0.5.2:../../math/py-pywavelets
+DEPENDS+=      ${PYPKGPREFIX}-imageio>=2.3.0:../../graphics/py-imageio
+DEPENDS+=      ${PYPKGPREFIX}-pywavelets>=1.1.1:../../math/py-pywavelets
 DEPENDS+=      ${PYPKGPREFIX}-networkx>=2.0:../../math/py-networkx
 DEPENDS+=      ${PYPKGPREFIX}-six>=1.9.0:../../lang/py-six
 
diff -r c99539d6ca0a -r bec4e0cab3e6 math/py-scikit-image/PLIST
--- a/math/py-scikit-image/PLIST        Sat Dec 19 15:28:13 2020 +0000
+++ b/math/py-scikit-image/PLIST        Sat Dec 19 15:42:07 2020 +0000
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.3 2019/06/17 15:03:46 adam Exp $
+@comment $NetBSD: PLIST,v 1.4 2020/12/19 15:42:07 mef Exp $
 bin/skivi-${PYVERSSUFFIX}
 ${PYSITELIB}/${EGG_INFODIR}/PKG-INFO
 ${PYSITELIB}/${EGG_INFODIR}/SOURCES.txt
@@ -25,6 +25,13 @@
 ${PYSITELIB}/skimage/_shared/_warnings.py
 ${PYSITELIB}/skimage/_shared/_warnings.pyc
 ${PYSITELIB}/skimage/_shared/_warnings.pyo
+${PYSITELIB}/skimage/_shared/coord.py
+${PYSITELIB}/skimage/_shared/coord.pyc
+${PYSITELIB}/skimage/_shared/coord.pyo
+${PYSITELIB}/skimage/_shared/fast_exp.so
+${PYSITELIB}/skimage/_shared/fft.py
+${PYSITELIB}/skimage/_shared/fft.pyc
+${PYSITELIB}/skimage/_shared/fft.pyo
 ${PYSITELIB}/skimage/_shared/geometry.so
 ${PYSITELIB}/skimage/_shared/interpolation.so
 ${PYSITELIB}/skimage/_shared/setup.py
@@ -36,6 +43,12 @@
 ${PYSITELIB}/skimage/_shared/tests/__init__.py
 ${PYSITELIB}/skimage/_shared/tests/__init__.pyc
 ${PYSITELIB}/skimage/_shared/tests/__init__.pyo
+${PYSITELIB}/skimage/_shared/tests/test_coord.py
+${PYSITELIB}/skimage/_shared/tests/test_coord.pyc
+${PYSITELIB}/skimage/_shared/tests/test_coord.pyo
+${PYSITELIB}/skimage/_shared/tests/test_fast_exp.py
+${PYSITELIB}/skimage/_shared/tests/test_fast_exp.pyc
+${PYSITELIB}/skimage/_shared/tests/test_fast_exp.pyo
 ${PYSITELIB}/skimage/_shared/tests/test_geometry.py
 ${PYSITELIB}/skimage/_shared/tests/test_geometry.pyc
 ${PYSITELIB}/skimage/_shared/tests/test_geometry.pyo
@@ -54,6 +67,9 @@
 ${PYSITELIB}/skimage/_shared/tests/test_version_requirements.py
 ${PYSITELIB}/skimage/_shared/tests/test_version_requirements.pyc
 ${PYSITELIB}/skimage/_shared/tests/test_version_requirements.pyo
+${PYSITELIB}/skimage/_shared/tests/test_warnings.py
+${PYSITELIB}/skimage/_shared/tests/test_warnings.pyc
+${PYSITELIB}/skimage/_shared/tests/test_warnings.pyo
 ${PYSITELIB}/skimage/_shared/transform.so
 ${PYSITELIB}/skimage/_shared/utils.py
 ${PYSITELIB}/skimage/_shared/utils.pyc
@@ -82,27 +98,6 @@
 ${PYSITELIB}/skimage/color/tests/__init__.py
 ${PYSITELIB}/skimage/color/tests/__init__.pyc
 ${PYSITELIB}/skimage/color/tests/__init__.pyo
-${PYSITELIB}/skimage/color/tests/ciede2000_test_data.txt
-${PYSITELIB}/skimage/color/tests/data/lab_array_a_2.npy
-${PYSITELIB}/skimage/color/tests/data/lab_array_d50_10.npy
-${PYSITELIB}/skimage/color/tests/data/lab_array_d50_2.npy
-${PYSITELIB}/skimage/color/tests/data/lab_array_d55_10.npy
-${PYSITELIB}/skimage/color/tests/data/lab_array_d55_2.npy
-${PYSITELIB}/skimage/color/tests/data/lab_array_d65_10.npy
-${PYSITELIB}/skimage/color/tests/data/lab_array_d65_2.npy
-${PYSITELIB}/skimage/color/tests/data/lab_array_d75_10.npy
-${PYSITELIB}/skimage/color/tests/data/lab_array_d75_2.npy
-${PYSITELIB}/skimage/color/tests/data/lab_array_e_2.npy
-${PYSITELIB}/skimage/color/tests/data/luv_array_a_2.npy
-${PYSITELIB}/skimage/color/tests/data/luv_array_d50_10.npy
-${PYSITELIB}/skimage/color/tests/data/luv_array_d50_2.npy
-${PYSITELIB}/skimage/color/tests/data/luv_array_d55_10.npy
-${PYSITELIB}/skimage/color/tests/data/luv_array_d55_2.npy
-${PYSITELIB}/skimage/color/tests/data/luv_array_d65_10.npy
-${PYSITELIB}/skimage/color/tests/data/luv_array_d65_2.npy
-${PYSITELIB}/skimage/color/tests/data/luv_array_d75_10.npy
-${PYSITELIB}/skimage/color/tests/data/luv_array_d75_2.npy
-${PYSITELIB}/skimage/color/tests/data/luv_array_e_2.npy
 ${PYSITELIB}/skimage/color/tests/test_adapt_rgb.py
 ${PYSITELIB}/skimage/color/tests/test_adapt_rgb.pyc
 ${PYSITELIB}/skimage/color/tests/test_adapt_rgb.pyo
@@ -118,46 +113,29 @@
 ${PYSITELIB}/skimage/conftest.py
 ${PYSITELIB}/skimage/conftest.pyc
 ${PYSITELIB}/skimage/conftest.pyo
+${PYSITELIB}/skimage/data/README.txt
 ${PYSITELIB}/skimage/data/__init__.py
 ${PYSITELIB}/skimage/data/__init__.pyc
 ${PYSITELIB}/skimage/data/__init__.pyo
 ${PYSITELIB}/skimage/data/_binary_blobs.py
 ${PYSITELIB}/skimage/data/_binary_blobs.pyc
 ${PYSITELIB}/skimage/data/_binary_blobs.pyo
-${PYSITELIB}/skimage/data/_blobs_3d_fiji_skeleton.tif
-${PYSITELIB}/skimage/data/_detect.py
-${PYSITELIB}/skimage/data/_detect.pyc
-${PYSITELIB}/skimage/data/_detect.pyo
+${PYSITELIB}/skimage/data/_registry.py
+${PYSITELIB}/skimage/data/_registry.pyc
+${PYSITELIB}/skimage/data/_registry.pyo
 ${PYSITELIB}/skimage/data/astronaut.png
-${PYSITELIB}/skimage/data/astronaut_GRAY_hog_L1.npy
-${PYSITELIB}/skimage/data/astronaut_GRAY_hog_L2-Hys.npy
-${PYSITELIB}/skimage/data/block.png
 ${PYSITELIB}/skimage/data/brick.png
-${PYSITELIB}/skimage/data/bw_text.png
-${PYSITELIB}/skimage/data/bw_text_skeleton.npy
 ${PYSITELIB}/skimage/data/camera.png
-${PYSITELIB}/skimage/data/cells_qpi.npz
-${PYSITELIB}/skimage/data/cells_qpi_zipped.zip
-${PYSITELIB}/skimage/data/checker_bilevel.png
+${PYSITELIB}/skimage/data/cell.png
 ${PYSITELIB}/skimage/data/chelsea.png
 ${PYSITELIB}/skimage/data/chessboard_GRAY.png
-${PYSITELIB}/skimage/data/chessboard_GRAY_U16.tif
-${PYSITELIB}/skimage/data/chessboard_GRAY_U16B.tif
-${PYSITELIB}/skimage/data/chessboard_GRAY_U8.npy
-${PYSITELIB}/skimage/data/chessboard_GRAY_U8.npz
 ${PYSITELIB}/skimage/data/chessboard_RGB.png
-${PYSITELIB}/skimage/data/chessboard_RGB_U8.npy
-${PYSITELIB}/skimage/data/chessboard_RGB_U8.npz
 ${PYSITELIB}/skimage/data/clock_motion.png
 ${PYSITELIB}/skimage/data/coffee.png
 ${PYSITELIB}/skimage/data/coins.png
 ${PYSITELIB}/skimage/data/color.png
-${PYSITELIB}/skimage/data/diamond-matlab-output.npz
-${PYSITELIB}/skimage/data/disk-matlab-output.npz
-${PYSITELIB}/skimage/data/foo3x5x4indexed.png
 ${PYSITELIB}/skimage/data/grass.png
-${PYSITELIB}/skimage/data/gray_morph_output.npz
-${PYSITELIB}/skimage/data/green_palette.png
+${PYSITELIB}/skimage/data/gravel.png
 ${PYSITELIB}/skimage/data/horse.png
 ${PYSITELIB}/skimage/data/hubble_deep_field.jpg
 ${PYSITELIB}/skimage/data/ihc.png
@@ -169,21 +147,13 @@
 ${PYSITELIB}/skimage/data/motorcycle_disp.npz
 ${PYSITELIB}/skimage/data/motorcycle_left.png
 ${PYSITELIB}/skimage/data/motorcycle_right.png
-${PYSITELIB}/skimage/data/mssim_matlab_output.npz
-${PYSITELIB}/skimage/data/multi.fits
-${PYSITELIB}/skimage/data/multipage.tif
-${PYSITELIB}/skimage/data/multipage_rgb.tif
-${PYSITELIB}/skimage/data/no_time_for_that_tiny.gif
-${PYSITELIB}/skimage/data/orb_descriptor_positions.txt
 ${PYSITELIB}/skimage/data/page.png
-${PYSITELIB}/skimage/data/palette_color.png
-${PYSITELIB}/skimage/data/palette_gray.png
 ${PYSITELIB}/skimage/data/phantom.png
-${PYSITELIB}/skimage/data/rank_filter_tests.npz
 ${PYSITELIB}/skimage/data/retina.jpg
 ${PYSITELIB}/skimage/data/rocket.jpg
-${PYSITELIB}/skimage/data/rough-wall.png
-${PYSITELIB}/skimage/data/simple.fits
+${PYSITELIB}/skimage/data/setup.py
+${PYSITELIB}/skimage/data/setup.pyc
+${PYSITELIB}/skimage/data/setup.pyo
 ${PYSITELIB}/skimage/data/tests/__init__.py
 ${PYSITELIB}/skimage/data/tests/__init__.pyc
 ${PYSITELIB}/skimage/data/tests/__init__.pyo
@@ -191,11 +161,13 @@
 ${PYSITELIB}/skimage/data/tests/test_data.pyc
 ${PYSITELIB}/skimage/data/tests/test_data.pyo
 ${PYSITELIB}/skimage/data/text.png
-${PYSITELIB}/skimage/data/truncated.jpg
 ${PYSITELIB}/skimage/draw/__init__.py
 ${PYSITELIB}/skimage/draw/__init__.pyc
 ${PYSITELIB}/skimage/draw/__init__.pyo
 ${PYSITELIB}/skimage/draw/_draw.so
+${PYSITELIB}/skimage/draw/_polygon2mask.py
+${PYSITELIB}/skimage/draw/_polygon2mask.pyc
+${PYSITELIB}/skimage/draw/_polygon2mask.pyo
 ${PYSITELIB}/skimage/draw/_random_shapes.py
 ${PYSITELIB}/skimage/draw/_random_shapes.pyc
 ${PYSITELIB}/skimage/draw/_random_shapes.pyo
@@ -205,6 +177,9 @@
 ${PYSITELIB}/skimage/draw/draw3d.py
 ${PYSITELIB}/skimage/draw/draw3d.pyc
 ${PYSITELIB}/skimage/draw/draw3d.pyo
+${PYSITELIB}/skimage/draw/draw_nd.py
+${PYSITELIB}/skimage/draw/draw_nd.pyc
+${PYSITELIB}/skimage/draw/draw_nd.pyo
 ${PYSITELIB}/skimage/draw/setup.py
 ${PYSITELIB}/skimage/draw/setup.pyc
 ${PYSITELIB}/skimage/draw/setup.pyo
@@ -217,6 +192,12 @@
 ${PYSITELIB}/skimage/draw/tests/test_draw3d.py
 ${PYSITELIB}/skimage/draw/tests/test_draw3d.pyc
 ${PYSITELIB}/skimage/draw/tests/test_draw3d.pyo
+${PYSITELIB}/skimage/draw/tests/test_draw_nd.py
+${PYSITELIB}/skimage/draw/tests/test_draw_nd.pyc
+${PYSITELIB}/skimage/draw/tests/test_draw_nd.pyo
+${PYSITELIB}/skimage/draw/tests/test_polygon2mask.py
+${PYSITELIB}/skimage/draw/tests/test_polygon2mask.pyc
+${PYSITELIB}/skimage/draw/tests/test_polygon2mask.pyo
 ${PYSITELIB}/skimage/draw/tests/test_random_shapes.py
 ${PYSITELIB}/skimage/draw/tests/test_random_shapes.pyc
 ${PYSITELIB}/skimage/draw/tests/test_random_shapes.pyo
@@ -229,6 +210,9 @@
 ${PYSITELIB}/skimage/exposure/exposure.py
 ${PYSITELIB}/skimage/exposure/exposure.pyc
 ${PYSITELIB}/skimage/exposure/exposure.pyo
+${PYSITELIB}/skimage/exposure/histogram_matching.py
+${PYSITELIB}/skimage/exposure/histogram_matching.pyc
+${PYSITELIB}/skimage/exposure/histogram_matching.pyo
 ${PYSITELIB}/skimage/exposure/setup.py
 ${PYSITELIB}/skimage/exposure/setup.pyc
 ${PYSITELIB}/skimage/exposure/setup.pyo
@@ -238,25 +222,15 @@
 ${PYSITELIB}/skimage/exposure/tests/test_exposure.py
 ${PYSITELIB}/skimage/exposure/tests/test_exposure.pyc
 ${PYSITELIB}/skimage/exposure/tests/test_exposure.pyo
-${PYSITELIB}/skimage/external/__init__.py
-${PYSITELIB}/skimage/external/__init__.pyc
-${PYSITELIB}/skimage/external/__init__.pyo
-${PYSITELIB}/skimage/external/setup.py
-${PYSITELIB}/skimage/external/setup.pyc
-${PYSITELIB}/skimage/external/setup.pyo
-${PYSITELIB}/skimage/external/test_tifffile.py
-${PYSITELIB}/skimage/external/test_tifffile.pyc
-${PYSITELIB}/skimage/external/test_tifffile.pyo
-${PYSITELIB}/skimage/external/tifffile/__init__.py
-${PYSITELIB}/skimage/external/tifffile/__init__.pyc
-${PYSITELIB}/skimage/external/tifffile/__init__.pyo
-${PYSITELIB}/skimage/external/tifffile/_tifffile.so
-${PYSITELIB}/skimage/external/tifffile/tifffile.py
-${PYSITELIB}/skimage/external/tifffile/tifffile.pyc
-${PYSITELIB}/skimage/external/tifffile/tifffile.pyo
+${PYSITELIB}/skimage/exposure/tests/test_histogram_matching.py
+${PYSITELIB}/skimage/exposure/tests/test_histogram_matching.pyc
+${PYSITELIB}/skimage/exposure/tests/test_histogram_matching.pyo
 ${PYSITELIB}/skimage/feature/__init__.py
 ${PYSITELIB}/skimage/feature/__init__.pyc
 ${PYSITELIB}/skimage/feature/__init__.pyo
+${PYSITELIB}/skimage/feature/_basic_features.py
+${PYSITELIB}/skimage/feature/_basic_features.pyc
+${PYSITELIB}/skimage/feature/_basic_features.pyo
 ${PYSITELIB}/skimage/feature/_canny.py
 ${PYSITELIB}/skimage/feature/_canny.pyc
 ${PYSITELIB}/skimage/feature/_canny.pyo
@@ -270,6 +244,9 @@
 ${PYSITELIB}/skimage/feature/_hog.pyc
 ${PYSITELIB}/skimage/feature/_hog.pyo
 ${PYSITELIB}/skimage/feature/_hoghistogram.so
+${PYSITELIB}/skimage/feature/_orb_descriptor_positions.py
+${PYSITELIB}/skimage/feature/_orb_descriptor_positions.pyc
+${PYSITELIB}/skimage/feature/_orb_descriptor_positions.pyo
 ${PYSITELIB}/skimage/feature/_texture.so
 ${PYSITELIB}/skimage/feature/blob.py
 ${PYSITELIB}/skimage/feature/blob.pyc
@@ -289,9 +266,6 @@
 ${PYSITELIB}/skimage/feature/haar.py
 ${PYSITELIB}/skimage/feature/haar.pyc
 ${PYSITELIB}/skimage/feature/haar.pyo
-${PYSITELIB}/skimage/feature/masked_register_translation.py
-${PYSITELIB}/skimage/feature/masked_register_translation.pyc
-${PYSITELIB}/skimage/feature/masked_register_translation.pyo
 ${PYSITELIB}/skimage/feature/match.py
 ${PYSITELIB}/skimage/feature/match.pyc
 ${PYSITELIB}/skimage/feature/match.pyo
@@ -299,12 +273,10 @@
 ${PYSITELIB}/skimage/feature/orb.pyc
 ${PYSITELIB}/skimage/feature/orb.pyo
 ${PYSITELIB}/skimage/feature/orb_cy.so
+${PYSITELIB}/skimage/feature/orb_descriptor_positions.txt
 ${PYSITELIB}/skimage/feature/peak.py
 ${PYSITELIB}/skimage/feature/peak.pyc
 ${PYSITELIB}/skimage/feature/peak.pyo
-${PYSITELIB}/skimage/feature/register_translation.py
-${PYSITELIB}/skimage/feature/register_translation.pyc
-${PYSITELIB}/skimage/feature/register_translation.pyo
 ${PYSITELIB}/skimage/feature/setup.py
 ${PYSITELIB}/skimage/feature/setup.pyc
 ${PYSITELIB}/skimage/feature/setup.pyo
@@ -314,12 +286,9 @@
 ${PYSITELIB}/skimage/feature/tests/__init__.py
 ${PYSITELIB}/skimage/feature/tests/__init__.pyc
 ${PYSITELIB}/skimage/feature/tests/__init__.pyo



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