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[pkgsrc/trunk]: pkgsrc/math/py-scikit-learn math/py-scikit-learn: Update to 0...
details: https://anonhg.NetBSD.org/pkgsrc/rev/85e42e581c04
branches: trunk
changeset: 313549:85e42e581c04
user: minskim <minskim%pkgsrc.org@localhost>
date: Tue Oct 02 16:53:46 2018 +0000
description:
math/py-scikit-learn: Update to 0.20.0
Highlights:
Missing values in features, represented by NaNs, are now accepted in
column-wise preprocessing such as scalers. Each feature is fitted
disregarding NaNs, and data containing NaNs can be transformed. The
new impute module provides estimators for learning despite missing
data.
ColumnTransformer handles the case where different features or columns
of a pandas.DataFrame need different preprocessing. String or pandas
Categorical columns can now be encoded with OneHotEncoder or
OrdinalEncoder.
TransformedTargetRegressor helps when the regression target needs to
be transformed to be modeled. PowerTransformer and KBinsDiscretizer
join QuantileTransformer as non-linear transformations.
Added sample_weight support to several estimators (including KMeans,
BayesianRidge and KernelDensity) and improved stopping criteria in
others (including MLPRegressor, GradientBoostingRegressor and
SGDRegressor).
This release is also the first to be accompanied by a Glossary of
Common Terms and API Elements.
diffstat:
math/py-scikit-learn/Makefile | 4 +-
math/py-scikit-learn/PLIST | 327 ++++++++++++++++++++++++++++++++++-------
math/py-scikit-learn/distinfo | 10 +-
3 files changed, 277 insertions(+), 64 deletions(-)
diffs (truncated from 691 to 300 lines):
diff -r ed32a907d2b0 -r 85e42e581c04 math/py-scikit-learn/Makefile
--- a/math/py-scikit-learn/Makefile Tue Oct 02 15:54:46 2018 +0000
+++ b/math/py-scikit-learn/Makefile Tue Oct 02 16:53:46 2018 +0000
@@ -1,6 +1,6 @@
-# $NetBSD: Makefile,v 1.5 2018/08/06 16:18:12 minskim Exp $
+# $NetBSD: Makefile,v 1.6 2018/10/02 16:53:46 minskim Exp $
-DISTNAME= scikit-learn-0.19.2
+DISTNAME= scikit-learn-0.20.0
PKGNAME= ${PYPKGPREFIX}-${DISTNAME}
CATEGORIES= math
MASTER_SITES= ${MASTER_SITE_PYPI:=s/scikit-learn/}
diff -r ed32a907d2b0 -r 85e42e581c04 math/py-scikit-learn/PLIST
--- a/math/py-scikit-learn/PLIST Tue Oct 02 15:54:46 2018 +0000
+++ b/math/py-scikit-learn/PLIST Tue Oct 02 16:53:46 2018 +0000
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.2 2017/11/21 18:45:28 minskim Exp $
+@comment $NetBSD: PLIST,v 1.3 2018/10/02 16:53:46 minskim Exp $
${PYSITELIB}/${EGG_INFODIR}/PKG-INFO
${PYSITELIB}/${EGG_INFODIR}/SOURCES.txt
${PYSITELIB}/${EGG_INFODIR}/dependency_links.txt
@@ -18,6 +18,9 @@
${PYSITELIB}/sklearn/_build_utils/__init__.py
${PYSITELIB}/sklearn/_build_utils/__init__.pyc
${PYSITELIB}/sklearn/_build_utils/__init__.pyo
+${PYSITELIB}/sklearn/_config.py
+${PYSITELIB}/sklearn/_config.pyc
+${PYSITELIB}/sklearn/_config.pyo
${PYSITELIB}/sklearn/_isotonic.so
${PYSITELIB}/sklearn/base.py
${PYSITELIB}/sklearn/base.pyc
@@ -33,8 +36,8 @@
${PYSITELIB}/sklearn/cluster/_feature_agglomeration.pyc
${PYSITELIB}/sklearn/cluster/_feature_agglomeration.pyo
${PYSITELIB}/sklearn/cluster/_hierarchical.so
+${PYSITELIB}/sklearn/cluster/_k_means.so
${PYSITELIB}/sklearn/cluster/_k_means_elkan.so
-${PYSITELIB}/sklearn/cluster/_k_means.so
${PYSITELIB}/sklearn/cluster/affinity_propagation_.py
${PYSITELIB}/sklearn/cluster/affinity_propagation_.pyc
${PYSITELIB}/sklearn/cluster/affinity_propagation_.pyo
@@ -80,6 +83,9 @@
${PYSITELIB}/sklearn/cluster/tests/test_dbscan.py
${PYSITELIB}/sklearn/cluster/tests/test_dbscan.pyc
${PYSITELIB}/sklearn/cluster/tests/test_dbscan.pyo
+${PYSITELIB}/sklearn/cluster/tests/test_feature_agglomeration.py
+${PYSITELIB}/sklearn/cluster/tests/test_feature_agglomeration.pyc
+${PYSITELIB}/sklearn/cluster/tests/test_feature_agglomeration.pyo
${PYSITELIB}/sklearn/cluster/tests/test_hierarchical.py
${PYSITELIB}/sklearn/cluster/tests/test_hierarchical.pyc
${PYSITELIB}/sklearn/cluster/tests/test_hierarchical.pyo
@@ -92,18 +98,36 @@
${PYSITELIB}/sklearn/cluster/tests/test_spectral.py
${PYSITELIB}/sklearn/cluster/tests/test_spectral.pyc
${PYSITELIB}/sklearn/cluster/tests/test_spectral.pyo
+${PYSITELIB}/sklearn/compose/__init__.py
+${PYSITELIB}/sklearn/compose/__init__.pyc
+${PYSITELIB}/sklearn/compose/__init__.pyo
+${PYSITELIB}/sklearn/compose/_column_transformer.py
+${PYSITELIB}/sklearn/compose/_column_transformer.pyc
+${PYSITELIB}/sklearn/compose/_column_transformer.pyo
+${PYSITELIB}/sklearn/compose/_target.py
+${PYSITELIB}/sklearn/compose/_target.pyc
+${PYSITELIB}/sklearn/compose/_target.pyo
+${PYSITELIB}/sklearn/compose/tests/__init__.py
+${PYSITELIB}/sklearn/compose/tests/__init__.pyc
+${PYSITELIB}/sklearn/compose/tests/__init__.pyo
+${PYSITELIB}/sklearn/compose/tests/test_column_transformer.py
+${PYSITELIB}/sklearn/compose/tests/test_column_transformer.pyc
+${PYSITELIB}/sklearn/compose/tests/test_column_transformer.pyo
+${PYSITELIB}/sklearn/compose/tests/test_target.py
+${PYSITELIB}/sklearn/compose/tests/test_target.pyc
+${PYSITELIB}/sklearn/compose/tests/test_target.pyo
${PYSITELIB}/sklearn/covariance/__init__.py
${PYSITELIB}/sklearn/covariance/__init__.pyc
${PYSITELIB}/sklearn/covariance/__init__.pyo
+${PYSITELIB}/sklearn/covariance/elliptic_envelope.py
+${PYSITELIB}/sklearn/covariance/elliptic_envelope.pyc
+${PYSITELIB}/sklearn/covariance/elliptic_envelope.pyo
${PYSITELIB}/sklearn/covariance/empirical_covariance_.py
${PYSITELIB}/sklearn/covariance/empirical_covariance_.pyc
${PYSITELIB}/sklearn/covariance/empirical_covariance_.pyo
${PYSITELIB}/sklearn/covariance/graph_lasso_.py
${PYSITELIB}/sklearn/covariance/graph_lasso_.pyc
${PYSITELIB}/sklearn/covariance/graph_lasso_.pyo
-${PYSITELIB}/sklearn/covariance/outlier_detection.py
-${PYSITELIB}/sklearn/covariance/outlier_detection.pyc
-${PYSITELIB}/sklearn/covariance/outlier_detection.pyo
${PYSITELIB}/sklearn/covariance/robust_covariance.py
${PYSITELIB}/sklearn/covariance/robust_covariance.pyc
${PYSITELIB}/sklearn/covariance/robust_covariance.pyo
@@ -116,9 +140,15 @@
${PYSITELIB}/sklearn/covariance/tests/test_covariance.py
${PYSITELIB}/sklearn/covariance/tests/test_covariance.pyc
${PYSITELIB}/sklearn/covariance/tests/test_covariance.pyo
+${PYSITELIB}/sklearn/covariance/tests/test_elliptic_envelope.py
+${PYSITELIB}/sklearn/covariance/tests/test_elliptic_envelope.pyc
+${PYSITELIB}/sklearn/covariance/tests/test_elliptic_envelope.pyo
${PYSITELIB}/sklearn/covariance/tests/test_graph_lasso.py
${PYSITELIB}/sklearn/covariance/tests/test_graph_lasso.pyc
${PYSITELIB}/sklearn/covariance/tests/test_graph_lasso.pyo
+${PYSITELIB}/sklearn/covariance/tests/test_graphical_lasso.py
+${PYSITELIB}/sklearn/covariance/tests/test_graphical_lasso.pyc
+${PYSITELIB}/sklearn/covariance/tests/test_graphical_lasso.pyo
${PYSITELIB}/sklearn/covariance/tests/test_robust_covariance.py
${PYSITELIB}/sklearn/covariance/tests/test_robust_covariance.pyc
${PYSITELIB}/sklearn/covariance/tests/test_robust_covariance.pyo
@@ -137,9 +167,6 @@
${PYSITELIB}/sklearn/cross_decomposition/tests/test_pls.py
${PYSITELIB}/sklearn/cross_decomposition/tests/test_pls.pyc
${PYSITELIB}/sklearn/cross_decomposition/tests/test_pls.pyo
-${PYSITELIB}/sklearn/cross_validation.py
-${PYSITELIB}/sklearn/cross_validation.pyc
-${PYSITELIB}/sklearn/cross_validation.pyo
${PYSITELIB}/sklearn/datasets/__init__.py
${PYSITELIB}/sklearn/datasets/__init__.pyc
${PYSITELIB}/sklearn/datasets/__init__.pyo
@@ -164,14 +191,21 @@
${PYSITELIB}/sklearn/datasets/data/wine_data.csv
${PYSITELIB}/sklearn/datasets/descr/boston_house_prices.rst
${PYSITELIB}/sklearn/datasets/descr/breast_cancer.rst
+${PYSITELIB}/sklearn/datasets/descr/california_housing.rst
+${PYSITELIB}/sklearn/datasets/descr/covtype.rst
${PYSITELIB}/sklearn/datasets/descr/diabetes.rst
${PYSITELIB}/sklearn/datasets/descr/digits.rst
${PYSITELIB}/sklearn/datasets/descr/iris.rst
+${PYSITELIB}/sklearn/datasets/descr/kddcup99.rst
+${PYSITELIB}/sklearn/datasets/descr/lfw.rst
${PYSITELIB}/sklearn/datasets/descr/linnerud.rst
+${PYSITELIB}/sklearn/datasets/descr/olivetti_faces.rst
+${PYSITELIB}/sklearn/datasets/descr/rcv1.rst
+${PYSITELIB}/sklearn/datasets/descr/twenty_newsgroups.rst
${PYSITELIB}/sklearn/datasets/descr/wine_data.rst
+${PYSITELIB}/sklearn/datasets/images/README.txt
${PYSITELIB}/sklearn/datasets/images/china.jpg
${PYSITELIB}/sklearn/datasets/images/flower.jpg
-${PYSITELIB}/sklearn/datasets/images/README.txt
${PYSITELIB}/sklearn/datasets/kddcup99.py
${PYSITELIB}/sklearn/datasets/kddcup99.pyc
${PYSITELIB}/sklearn/datasets/kddcup99.pyo
@@ -187,6 +221,9 @@
${PYSITELIB}/sklearn/datasets/olivetti_faces.py
${PYSITELIB}/sklearn/datasets/olivetti_faces.pyc
${PYSITELIB}/sklearn/datasets/olivetti_faces.pyo
+${PYSITELIB}/sklearn/datasets/openml.py
+${PYSITELIB}/sklearn/datasets/openml.pyc
+${PYSITELIB}/sklearn/datasets/openml.pyo
${PYSITELIB}/sklearn/datasets/rcv1.py
${PYSITELIB}/sklearn/datasets/rcv1.pyc
${PYSITELIB}/sklearn/datasets/rcv1.pyo
@@ -205,9 +242,50 @@
${PYSITELIB}/sklearn/datasets/tests/__init__.py
${PYSITELIB}/sklearn/datasets/tests/__init__.pyc
${PYSITELIB}/sklearn/datasets/tests/__init__.pyo
+${PYSITELIB}/sklearn/datasets/tests/data/openml/2/api-v1-json-data-2.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/2/api-v1-json-data-features-2.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/2/api-v1-json-data-list-data_name-anneal-limit-2-data_version-1.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/2/api-v1-json-data-list-data_name-anneal-limit-2-status-active-.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/2/data-v1-download-1666876.arff.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/292/api-v1-json-data-292.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/292/api-v1-json-data-40981.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/292/api-v1-json-data-features-292.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/292/api-v1-json-data-features-40981.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/292/api-v1-json-data-list-data_name-australian-limit-2-data_version-1-status-deactivated.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/292/api-v1-json-data-list-data_name-australian-limit-2-data_version-1.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/292/api-v1-json-data-list-data_name-australian-limit-2-status-active-.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/292/data-v1-download-49822.arff.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/40589/api-v1-json-data-40589.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/40589/api-v1-json-data-features-40589.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/40589/api-v1-json-data-list-data_name-emotions-limit-2-data_version-3.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/40589/api-v1-json-data-list-data_name-emotions-limit-2-status-active-.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/40589/data-v1-download-4644182.arff.gz
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+${PYSITELIB}/sklearn/datasets/tests/data/openml/40675/api-v1-json-data-list-data_name-glass2-limit-2-data_version-1.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/40675/api-v1-json-data-list-data_name-glass2-limit-2-status-active-.json.gz
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+${PYSITELIB}/sklearn/datasets/tests/data/openml/561/data-v1-download-52739.arff.gz
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+${PYSITELIB}/sklearn/datasets/tests/data/openml/61/api-v1-json-data-list-data_name-iris-limit-2-data_version-1.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/61/api-v1-json-data-list-data_name-iris-limit-2-status-active-.json.gz
+${PYSITELIB}/sklearn/datasets/tests/data/openml/61/data-v1-download-61.arff.gz
${PYSITELIB}/sklearn/datasets/tests/data/svmlight_classification.txt
+${PYSITELIB}/sklearn/datasets/tests/data/svmlight_invalid.txt
${PYSITELIB}/sklearn/datasets/tests/data/svmlight_invalid_order.txt
-${PYSITELIB}/sklearn/datasets/tests/data/svmlight_invalid.txt
${PYSITELIB}/sklearn/datasets/tests/data/svmlight_multilabel.txt
${PYSITELIB}/sklearn/datasets/tests/test_20news.py
${PYSITELIB}/sklearn/datasets/tests/test_20news.pyc
@@ -215,6 +293,12 @@
${PYSITELIB}/sklearn/datasets/tests/test_base.py
${PYSITELIB}/sklearn/datasets/tests/test_base.pyc
${PYSITELIB}/sklearn/datasets/tests/test_base.pyo
+${PYSITELIB}/sklearn/datasets/tests/test_california_housing.py
+${PYSITELIB}/sklearn/datasets/tests/test_california_housing.pyc
+${PYSITELIB}/sklearn/datasets/tests/test_california_housing.pyo
+${PYSITELIB}/sklearn/datasets/tests/test_common.py
+${PYSITELIB}/sklearn/datasets/tests/test_common.pyc
+${PYSITELIB}/sklearn/datasets/tests/test_common.pyo
${PYSITELIB}/sklearn/datasets/tests/test_covtype.py
${PYSITELIB}/sklearn/datasets/tests/test_covtype.pyc
${PYSITELIB}/sklearn/datasets/tests/test_covtype.pyo
@@ -227,6 +311,9 @@
${PYSITELIB}/sklearn/datasets/tests/test_mldata.py
${PYSITELIB}/sklearn/datasets/tests/test_mldata.pyc
${PYSITELIB}/sklearn/datasets/tests/test_mldata.pyo
+${PYSITELIB}/sklearn/datasets/tests/test_openml.py
+${PYSITELIB}/sklearn/datasets/tests/test_openml.pyc
+${PYSITELIB}/sklearn/datasets/tests/test_openml.pyo
${PYSITELIB}/sklearn/datasets/tests/test_rcv1.py
${PYSITELIB}/sklearn/datasets/tests/test_rcv1.pyc
${PYSITELIB}/sklearn/datasets/tests/test_rcv1.pyo
@@ -356,12 +443,12 @@
${PYSITELIB}/sklearn/ensemble/tests/test_forest.py
${PYSITELIB}/sklearn/ensemble/tests/test_forest.pyc
${PYSITELIB}/sklearn/ensemble/tests/test_forest.pyo
+${PYSITELIB}/sklearn/ensemble/tests/test_gradient_boosting.py
+${PYSITELIB}/sklearn/ensemble/tests/test_gradient_boosting.pyc
+${PYSITELIB}/sklearn/ensemble/tests/test_gradient_boosting.pyo
${PYSITELIB}/sklearn/ensemble/tests/test_gradient_boosting_loss_functions.py
${PYSITELIB}/sklearn/ensemble/tests/test_gradient_boosting_loss_functions.pyc
${PYSITELIB}/sklearn/ensemble/tests/test_gradient_boosting_loss_functions.pyo
-${PYSITELIB}/sklearn/ensemble/tests/test_gradient_boosting.py
-${PYSITELIB}/sklearn/ensemble/tests/test_gradient_boosting.pyc
-${PYSITELIB}/sklearn/ensemble/tests/test_gradient_boosting.pyo
${PYSITELIB}/sklearn/ensemble/tests/test_iforest.py
${PYSITELIB}/sklearn/ensemble/tests/test_iforest.pyc
${PYSITELIB}/sklearn/ensemble/tests/test_iforest.pyo
@@ -386,6 +473,15 @@
${PYSITELIB}/sklearn/externals/__init__.py
${PYSITELIB}/sklearn/externals/__init__.pyc
${PYSITELIB}/sklearn/externals/__init__.pyo
+${PYSITELIB}/sklearn/externals/_arff.py
+${PYSITELIB}/sklearn/externals/_arff.pyc
+${PYSITELIB}/sklearn/externals/_arff.pyo
+${PYSITELIB}/sklearn/externals/_pilutil.py
+${PYSITELIB}/sklearn/externals/_pilutil.pyc
+${PYSITELIB}/sklearn/externals/_pilutil.pyo
+${PYSITELIB}/sklearn/externals/conftest.py
+${PYSITELIB}/sklearn/externals/conftest.pyc
+${PYSITELIB}/sklearn/externals/conftest.pyo
${PYSITELIB}/sklearn/externals/funcsigs.py
${PYSITELIB}/sklearn/externals/funcsigs.pyc
${PYSITELIB}/sklearn/externals/funcsigs.pyo
@@ -395,6 +491,12 @@
${PYSITELIB}/sklearn/externals/joblib/_compat.py
${PYSITELIB}/sklearn/externals/joblib/_compat.pyc
${PYSITELIB}/sklearn/externals/joblib/_compat.pyo
+${PYSITELIB}/sklearn/externals/joblib/_dask.py
+${PYSITELIB}/sklearn/externals/joblib/_dask.pyc
+${PYSITELIB}/sklearn/externals/joblib/_dask.pyo
+${PYSITELIB}/sklearn/externals/joblib/_memmapping_reducer.py
+${PYSITELIB}/sklearn/externals/joblib/_memmapping_reducer.pyc
+${PYSITELIB}/sklearn/externals/joblib/_memmapping_reducer.pyo
${PYSITELIB}/sklearn/externals/joblib/_memory_helpers.py
${PYSITELIB}/sklearn/externals/joblib/_memory_helpers.pyc
${PYSITELIB}/sklearn/externals/joblib/_memory_helpers.pyo
@@ -404,12 +506,108 @@
${PYSITELIB}/sklearn/externals/joblib/_parallel_backends.py
${PYSITELIB}/sklearn/externals/joblib/_parallel_backends.pyc
${PYSITELIB}/sklearn/externals/joblib/_parallel_backends.pyo
+${PYSITELIB}/sklearn/externals/joblib/_store_backends.py
+${PYSITELIB}/sklearn/externals/joblib/_store_backends.pyc
+${PYSITELIB}/sklearn/externals/joblib/_store_backends.pyo
${PYSITELIB}/sklearn/externals/joblib/backports.py
${PYSITELIB}/sklearn/externals/joblib/backports.pyc
${PYSITELIB}/sklearn/externals/joblib/backports.pyo
+${PYSITELIB}/sklearn/externals/joblib/compressor.py
+${PYSITELIB}/sklearn/externals/joblib/compressor.pyc
+${PYSITELIB}/sklearn/externals/joblib/compressor.pyo
${PYSITELIB}/sklearn/externals/joblib/disk.py
${PYSITELIB}/sklearn/externals/joblib/disk.pyc
${PYSITELIB}/sklearn/externals/joblib/disk.pyo
+${PYSITELIB}/sklearn/externals/joblib/executor.py
+${PYSITELIB}/sklearn/externals/joblib/executor.pyc
+${PYSITELIB}/sklearn/externals/joblib/executor.pyo
+${PYSITELIB}/sklearn/externals/joblib/externals/__init__.py
+${PYSITELIB}/sklearn/externals/joblib/externals/__init__.pyc
+${PYSITELIB}/sklearn/externals/joblib/externals/__init__.pyo
+${PYSITELIB}/sklearn/externals/joblib/externals/cloudpickle/__init__.py
+${PYSITELIB}/sklearn/externals/joblib/externals/cloudpickle/__init__.pyc
+${PYSITELIB}/sklearn/externals/joblib/externals/cloudpickle/__init__.pyo
+${PYSITELIB}/sklearn/externals/joblib/externals/cloudpickle/cloudpickle.py
+${PYSITELIB}/sklearn/externals/joblib/externals/cloudpickle/cloudpickle.pyc
+${PYSITELIB}/sklearn/externals/joblib/externals/cloudpickle/cloudpickle.pyo
+${PYSITELIB}/sklearn/externals/joblib/externals/loky/__init__.py
+${PYSITELIB}/sklearn/externals/joblib/externals/loky/__init__.pyc
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