Re: htslib: Use pkgsrc install macros instead of mkdir

[Jason Bacon <bacon4000%gmail.com@localhost>]

On 05/18/17 06:08, Thomas Klausner wrote:
> On Wed, May 17, 2017 at 11:15:19AM -0500, Jason Bacon wrote:
> > That's what I would have thought, but install fails without them.  I could
> > try additional patching to make it respect the environment more completely,
> > but this is probably the last release of the 1.3 line and I'd rather put my
> > time into packaging 1.4 and numerous other science tools.
> The install framework provides BSD_INSTALL_* instead of INSTALL_*,
> perhaps because INSTALL_* is too generic and would lead to conflicts.
> I've fixed the package to use these defines, and also fixed the
> pkgconfig file while I was there.
>
> Cheers,
>   Thomas

I had to add one more patch to htslib to solve this problem:

https://sourceforge.net/p/samtools/mailman/message/31883152/

They're using cpp pasting to simulate polymorphic functions. NetBSD was 
expanding uintXX_t to __unintXX_t in one macro, but not others.  This 
patch brings them all into agreement.

With that, samtools should be ready for review now as well.

Thanks,

    JB

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