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htslib: Add COMMIT_MSG, limit bash and perl deps to test target



Module Name:	pkgsrc-wip
Committed By:	Jason W. Bacon <bacon%NetBSD.org@localhost>
Pushed By:	outpaddling
Date:		Thu Oct 10 18:13:58 2024 -0500
Changeset:	4c21f618fcf8f3e82030fb0a02e9a6fc7df6b5e8

Modified Files:
	htslib/Makefile
Added Files:
	htslib/COMMIT_MSG

Log Message:
htslib: Add COMMIT_MSG, limit bash and perl deps to test target

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=4c21f618fcf8f3e82030fb0a02e9a6fc7df6b5e8

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 htslib/COMMIT_MSG | 13 +++++++++++++
 htslib/Makefile   |  2 +-
 2 files changed, 14 insertions(+), 1 deletion(-)

diffs:
diff --git a/htslib/COMMIT_MSG b/htslib/COMMIT_MSG
new file mode 100644
index 0000000000..ddd559fe5b
--- /dev/null
+++ b/htslib/COMMIT_MSG
@@ -0,0 +1,13 @@
+biology/htslib: Update to 1.21
+
+Packaged in wip by J Bacon
+
+# pkgsrc-specific changes:
+
+Remove mysterious CONFIGURE_ENV.NetBSD+= hts_cv_have_neon=no.
+A comment was added stating that it caused build failures.
+
+# Upstream changes:
+
+Numerous bug fixes and enhancements since 1.17.
+Changes: https://github.com/samtools/htslib/releases
diff --git a/htslib/Makefile b/htslib/Makefile
index 656141d561..20444c5409 100644
--- a/htslib/Makefile
+++ b/htslib/Makefile
@@ -13,7 +13,7 @@ HOMEPAGE=	https://www.htslib.org/
 COMMENT=	C library for high-throughput sequencing data formats
 LICENSE=	mit
 
-USE_TOOLS+=		autoconf automake autoreconf bash gmake perl
+USE_TOOLS+=		autoconf automake autoreconf bash:test gmake perl:test
 GNU_CONFIGURE=		yes
 CONFIGURE_ARGS+=	--enable-libcurl
 PKGCONFIG_OVERRIDE=	htslib.pc.in


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