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rna-seq: Remove GNU parallel and clean up
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Mon Dec 12 12:33:36 2022 -0600
Changeset: 948107e15c5845cc4d000239f754519a512698bb
Modified Files:
rna-seq/DESCR
rna-seq/Makefile
Log Message:
rna-seq: Remove GNU parallel and clean up
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=948107e15c5845cc4d000239f754519a512698bb
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
rna-seq/DESCR | 14 ++++----------
rna-seq/Makefile | 1 -
2 files changed, 4 insertions(+), 11 deletions(-)
diffs:
diff --git a/rna-seq/DESCR b/rna-seq/DESCR
index 5b792cc0aa..7f4a034ce4 100644
--- a/rna-seq/DESCR
+++ b/rna-seq/DESCR
@@ -1,11 +1,5 @@
The rna-seq meta-package provides the core tools needed for performing
-an RNA-Seq differential gene expression analysis, including adapter
-trimming, quality control, alignment, and identification of
-differentially expressed genes. Researchers may want additional
-tools for data manipulation, gene ontology, etc.
-
-This package does not contain anything by itself -- it is a
-"meta-package" that depends on other packages. Its sole purpose is
-to require dependencies so users can install this package only and
-have all the other packages pulled in by the package dependency
-mechanism.
+a typical RNA-Seq differential gene expression analysis, including
+adapter trimming, quality control, alignment, and identification of
+differentially expressed genes. Researchers may want additional tools
+for data manipulation, gene ontology, etc.
diff --git a/rna-seq/Makefile b/rna-seq/Makefile
index fd94fb0485..478c2c188a 100644
--- a/rna-seq/Makefile
+++ b/rna-seq/Makefile
@@ -8,7 +8,6 @@ MASTER_SITES= # empty
MAINTAINER= bacon%NetBSD.org@localhost
COMMENT= Core tools needed for RNA-Seq analysis
-DEPENDS+= parallel>=0:../../parallel/parallel
DEPENDS+= fastq-trim>=0:../../biology/fastq-trim
DEPENDS+= fastqc>=0:../../biology/fastqc
DEPENDS+= biolibc-tools>=0:../../biology/biolibc-tools
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