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rna-seq: Clean up deps
Module Name: pkgsrc-wip
Committed By: Jason Bacon <bacon%NetBSD.org@localhost>
Pushed By: outpaddling
Date: Sun Nov 6 16:19:46 2022 -0600
Changeset: 725e6335562123bacf9a889e4ab0c91f0b7dcaca
Modified Files:
rna-seq/Makefile
Log Message:
rna-seq: Clean up deps
To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=725e6335562123bacf9a889e4ab0c91f0b7dcaca
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
diffstat:
rna-seq/Makefile | 4 +---
1 file changed, 1 insertion(+), 3 deletions(-)
diffs:
diff --git a/rna-seq/Makefile b/rna-seq/Makefile
index c760b92fe2..42e438b109 100644
--- a/rna-seq/Makefile
+++ b/rna-seq/Makefile
@@ -13,11 +13,9 @@ DEPENDS+= fastqc>=0:../../biology/fastqc
DEPENDS+= biolibc-tools>=0:../../biology/biolibc-tools
DEPENDS+= gffread>=0:../../wip/gffread
DEPENDS+= kallisto>=0:../../biology/kallisto
-DEPENDS+= bwa>=0:../../biology/bwa
-DEPENDS+= bowtie2>=0:../../biology/bowtie2
DEPENDS+= hisat2>=0:../../biology/hisat2
-DEPENDS+= igv>=0:../../biology/igv
DEPENDS+= samtools>=0:../../biology/samtools
+DEPENDS+= igv>=0:../../biology/igv
DEPENDS+= fasda>=0:../../wip/fasda
META_PACKAGE= yes
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