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py-theano: Update to 1.0.2

Module Name:	pkgsrc-wip
Committed By:	Min Sik Kim <minskim%NetBSD.org@localhost>
Pushed By:	minskim
Date:		Thu Jul 5 17:30:51 2018 +0900
Changeset:	8a17d1cd84815476f690ac3d332efac327f76e4e

Modified Files:
	py-theano/Makefile
	py-theano/PLIST
	py-theano/distinfo

Log Message:
py-theano: Update to 1.0.2

Notable changes since 0.9.0:
- Removed old GPU backend ``theano.sandbox.cuda``. New backend
  ``theano.gpuarray`` is now the official GPU backend
- Improved elemwise operations
- Scan improvements
- Speed up graph toposort algorithm
- Faster C compilation by massively using a new interface for op
  params
- Faster optimization step, with new optional destroy handler

To see a diff of this commit:
https://wip.pkgsrc.org/cgi-bin/gitweb.cgi?p=pkgsrc-wip.git;a=commitdiff;h=8a17d1cd84815476f690ac3d332efac327f76e4e

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

diffstat:
 py-theano/Makefile |   6 +-
 py-theano/PLIST    | 370 +++++++++++++++++------------------------------------
 py-theano/distinfo |   8 +-
 3 files changed, 126 insertions(+), 258 deletions(-)

diffs:
diff --git a/py-theano/Makefile b/py-theano/Makefile
index 39e5930815..78ac20cd6f 100644
--- a/py-theano/Makefile
+++ b/py-theano/Makefile
@@ -1,9 +1,11 @@
 # $NetBSD$
 
-DISTNAME=	Theano-0.9.0
+DISTNAME=	Theano-1.0.2
 PKGNAME=	${PYPKGPREFIX}-${DISTNAME:tl}
 CATEGORIES=	math python
-MASTER_SITES=	https://pypi.python.org/packages/28/03/6af9ff242da966f89de6ab81164db0d1a36fd89379b7370f07043de62f10/
+MASTER_SITES=	${MASTER_SITE_GITHUB:=Theano/}
+GITHUB_PROJECT=	Theano
+GITHUB_TAG=	rel-${PKGVERSION_NOREV}
 
 MAINTAINER=	jihbed.research%gmail.com@localhost
 HOMEPAGE=	http://deeplearning.net/software/theano/
diff --git a/py-theano/PLIST b/py-theano/PLIST
index efaac85a89..a908733437 100644
--- a/py-theano/PLIST
+++ b/py-theano/PLIST
@@ -19,12 +19,12 @@ ${PYSITELIB}/bin/theano_nose.pyo
 ${PYSITELIB}/theano/__init__.py
 ${PYSITELIB}/theano/__init__.pyc
 ${PYSITELIB}/theano/__init__.pyo
+${PYSITELIB}/theano/_version.py
+${PYSITELIB}/theano/_version.pyc
+${PYSITELIB}/theano/_version.pyo
 ${PYSITELIB}/theano/compat/__init__.py
 ${PYSITELIB}/theano/compat/__init__.pyc
 ${PYSITELIB}/theano/compat/__init__.pyo
-${PYSITELIB}/theano/compat/six.py
-${PYSITELIB}/theano/compat/six.pyc
-${PYSITELIB}/theano/compat/six.pyo
 ${PYSITELIB}/theano/compile/__init__.py
 ${PYSITELIB}/theano/compile/__init__.pyc
 ${PYSITELIB}/theano/compile/__init__.pyo
@@ -147,12 +147,11 @@ ${PYSITELIB}/theano/d3viz/tests/test_d3viz.pyo
 ${PYSITELIB}/theano/d3viz/tests/test_formatting.py
 ${PYSITELIB}/theano/d3viz/tests/test_formatting.pyc
 ${PYSITELIB}/theano/d3viz/tests/test_formatting.pyo
-${PYSITELIB}/theano/generated_version.py
-${PYSITELIB}/theano/generated_version.pyc
-${PYSITELIB}/theano/generated_version.pyo
 ${PYSITELIB}/theano/gof/__init__.py
 ${PYSITELIB}/theano/gof/__init__.pyc
 ${PYSITELIB}/theano/gof/__init__.pyo
+${PYSITELIB}/theano/gof/c_code/lazylinker_c.c
+${PYSITELIB}/theano/gof/c_code/theano_mod_helper.h
 ${PYSITELIB}/theano/gof/callcache.py
 ${PYSITELIB}/theano/gof/callcache.pyc
 ${PYSITELIB}/theano/gof/callcache.pyo
@@ -180,7 +179,6 @@ ${PYSITELIB}/theano/gof/fg.pyo
 ${PYSITELIB}/theano/gof/graph.py
 ${PYSITELIB}/theano/gof/graph.pyc
 ${PYSITELIB}/theano/gof/graph.pyo
-${PYSITELIB}/theano/gof/lazylinker_c.c
 ${PYSITELIB}/theano/gof/lazylinker_c.py
 ${PYSITELIB}/theano/gof/lazylinker_c.pyc
 ${PYSITELIB}/theano/gof/lazylinker_c.pyo
@@ -199,12 +197,17 @@ ${PYSITELIB}/theano/gof/opt.pyo
 ${PYSITELIB}/theano/gof/optdb.py
 ${PYSITELIB}/theano/gof/optdb.pyc
 ${PYSITELIB}/theano/gof/optdb.pyo
+${PYSITELIB}/theano/gof/params_type.py
+${PYSITELIB}/theano/gof/params_type.pyc
+${PYSITELIB}/theano/gof/params_type.pyo
 ${PYSITELIB}/theano/gof/sched.py
 ${PYSITELIB}/theano/gof/sched.pyc
 ${PYSITELIB}/theano/gof/sched.pyo
 ${PYSITELIB}/theano/gof/tests/__init__.py
 ${PYSITELIB}/theano/gof/tests/__init__.pyc
 ${PYSITELIB}/theano/gof/tests/__init__.pyo
+${PYSITELIB}/theano/gof/tests/c_code/test_cenum.h
+${PYSITELIB}/theano/gof/tests/c_code/test_quadratic_function.c
 ${PYSITELIB}/theano/gof/tests/test_cc.py
 ${PYSITELIB}/theano/gof/tests/test_cc.pyc
 ${PYSITELIB}/theano/gof/tests/test_cc.pyo
@@ -245,6 +248,9 @@ ${PYSITELIB}/theano/gof/tests/test_opt.pyo
 ${PYSITELIB}/theano/gof/tests/test_optdb.py
 ${PYSITELIB}/theano/gof/tests/test_optdb.pyc
 ${PYSITELIB}/theano/gof/tests/test_optdb.pyo
+${PYSITELIB}/theano/gof/tests/test_params_type.py
+${PYSITELIB}/theano/gof/tests/test_params_type.pyc
+${PYSITELIB}/theano/gof/tests/test_params_type.pyo
 ${PYSITELIB}/theano/gof/tests/test_sched.py
 ${PYSITELIB}/theano/gof/tests/test_sched.pyc
 ${PYSITELIB}/theano/gof/tests/test_sched.pyo
@@ -260,7 +266,6 @@ ${PYSITELIB}/theano/gof/tests/test_utils.pyo
 ${PYSITELIB}/theano/gof/tests/test_vm.py
 ${PYSITELIB}/theano/gof/tests/test_vm.pyc
 ${PYSITELIB}/theano/gof/tests/test_vm.pyo
-${PYSITELIB}/theano/gof/theano_mod_helper.h
 ${PYSITELIB}/theano/gof/toolbox.py
 ${PYSITELIB}/theano/gof/toolbox.pyc
 ${PYSITELIB}/theano/gof/toolbox.pyo
@@ -285,38 +290,65 @@ ${PYSITELIB}/theano/gpuarray/basic_ops.pyo
 ${PYSITELIB}/theano/gpuarray/blas.py
 ${PYSITELIB}/theano/gpuarray/blas.pyc
 ${PYSITELIB}/theano/gpuarray/blas.pyo
-${PYSITELIB}/theano/gpuarray/blockgemv.c
-${PYSITELIB}/theano/gpuarray/blockger.c
 ${PYSITELIB}/theano/gpuarray/blocksparse.py
 ${PYSITELIB}/theano/gpuarray/blocksparse.pyc
 ${PYSITELIB}/theano/gpuarray/blocksparse.pyo
-${PYSITELIB}/theano/gpuarray/conv_desc.c
-${PYSITELIB}/theano/gpuarray/corr3d_gemm.c
-${PYSITELIB}/theano/gpuarray/corr_gemm.c
-${PYSITELIB}/theano/gpuarray/cudnn_helper.h
+${PYSITELIB}/theano/gpuarray/c_code/blockgemv.c
+${PYSITELIB}/theano/gpuarray/c_code/blockger.c
+${PYSITELIB}/theano/gpuarray/c_code/conv_desc.c
+${PYSITELIB}/theano/gpuarray/c_code/corr3d_gemm.c
+${PYSITELIB}/theano/gpuarray/c_code/corr_gemm.c
+${PYSITELIB}/theano/gpuarray/c_code/ctc_wrapper.c
+${PYSITELIB}/theano/gpuarray/c_code/cudnn_helper.h
+${PYSITELIB}/theano/gpuarray/c_code/dimshuffle.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_base.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_batchnorm.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_batchnorm_base.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_batchnorm_grad.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_batchnorm_inf.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_conv_base.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_dropout_desc.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_dropout_fwd.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_fwd.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_gi.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_gw.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_pool.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_pool_grad.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_redux.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_rnn_desc.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_rnn_fwd.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_rnn_gi.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_rnn_gw.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_rnn_paramsize.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_softmax.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_softmax_grad.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_sptf_gi.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_sptf_grid.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_sptf_gt.c
+${PYSITELIB}/theano/gpuarray/c_code/dnn_sptf_sampler.c
+${PYSITELIB}/theano/gpuarray/c_code/gpuarray_helper.h
+${PYSITELIB}/theano/gpuarray/c_code/magma_cholesky.c
+${PYSITELIB}/theano/gpuarray/c_code/magma_eigh.c
+${PYSITELIB}/theano/gpuarray/c_code/magma_inv.c
+${PYSITELIB}/theano/gpuarray/c_code/magma_qr.c
+${PYSITELIB}/theano/gpuarray/c_code/magma_svd.c
+${PYSITELIB}/theano/gpuarray/c_code/pool.c
+${PYSITELIB}/theano/gpuarray/c_code/pool_ave_grad.c
+${PYSITELIB}/theano/gpuarray/c_code/pool_grad_grad.c
+${PYSITELIB}/theano/gpuarray/c_code/pool_max_grad.c
+${PYSITELIB}/theano/gpuarray/c_code/pool_max_rop.c
+${PYSITELIB}/theano/gpuarray/c_code/topk_common.cuh
+${PYSITELIB}/theano/gpuarray/c_code/topk_dense.cu
+${PYSITELIB}/theano/gpuarray/c_code/topk_dense_large.cu
+${PYSITELIB}/theano/gpuarray/ctc.py
+${PYSITELIB}/theano/gpuarray/ctc.pyc
+${PYSITELIB}/theano/gpuarray/ctc.pyo
+${PYSITELIB}/theano/gpuarray/cudnn_defs.py
+${PYSITELIB}/theano/gpuarray/cudnn_defs.pyc
+${PYSITELIB}/theano/gpuarray/cudnn_defs.pyo
 ${PYSITELIB}/theano/gpuarray/dnn.py
 ${PYSITELIB}/theano/gpuarray/dnn.pyc
 ${PYSITELIB}/theano/gpuarray/dnn.pyo
-${PYSITELIB}/theano/gpuarray/dnn_base.c
-${PYSITELIB}/theano/gpuarray/dnn_batchnorm.c
-${PYSITELIB}/theano/gpuarray/dnn_batchnorm_base.c
-${PYSITELIB}/theano/gpuarray/dnn_batchnorm_grad.c
-${PYSITELIB}/theano/gpuarray/dnn_batchnorm_inf.c
-${PYSITELIB}/theano/gpuarray/dnn_conv_base.c
-${PYSITELIB}/theano/gpuarray/dnn_dropout_desc.c
-${PYSITELIB}/theano/gpuarray/dnn_dropout_fwd.c
-${PYSITELIB}/theano/gpuarray/dnn_fwd.c
-${PYSITELIB}/theano/gpuarray/dnn_gi.c
-${PYSITELIB}/theano/gpuarray/dnn_gw.c
-${PYSITELIB}/theano/gpuarray/dnn_pool.c
-${PYSITELIB}/theano/gpuarray/dnn_pool_grad.c
-${PYSITELIB}/theano/gpuarray/dnn_rnn_desc.c
-${PYSITELIB}/theano/gpuarray/dnn_rnn_fwd.c
-${PYSITELIB}/theano/gpuarray/dnn_rnn_gi.c
-${PYSITELIB}/theano/gpuarray/dnn_rnn_gw.c
-${PYSITELIB}/theano/gpuarray/dnn_rnn_paramsize.c
-${PYSITELIB}/theano/gpuarray/dnn_softmax.c
-${PYSITELIB}/theano/gpuarray/dnn_softmax_grad.c
 ${PYSITELIB}/theano/gpuarray/elemwise.py
 ${PYSITELIB}/theano/gpuarray/elemwise.pyc
 ${PYSITELIB}/theano/gpuarray/elemwise.pyo
@@ -329,8 +361,6 @@ ${PYSITELIB}/theano/gpuarray/fft.pyo
 ${PYSITELIB}/theano/gpuarray/fp16_help.py
 ${PYSITELIB}/theano/gpuarray/fp16_help.pyc
 ${PYSITELIB}/theano/gpuarray/fp16_help.pyo
-${PYSITELIB}/theano/gpuarray/gemm16.c
-${PYSITELIB}/theano/gpuarray/gpuarray_helper.h
 ${PYSITELIB}/theano/gpuarray/kernel_codegen.py
 ${PYSITELIB}/theano/gpuarray/kernel_codegen.pyc
 ${PYSITELIB}/theano/gpuarray/kernel_codegen.pyo
@@ -355,17 +385,18 @@ ${PYSITELIB}/theano/gpuarray/opt.pyo
 ${PYSITELIB}/theano/gpuarray/opt_util.py
 ${PYSITELIB}/theano/gpuarray/opt_util.pyc
 ${PYSITELIB}/theano/gpuarray/opt_util.pyo
-${PYSITELIB}/theano/gpuarray/pool.c
 ${PYSITELIB}/theano/gpuarray/pool.py
 ${PYSITELIB}/theano/gpuarray/pool.pyc
 ${PYSITELIB}/theano/gpuarray/pool.pyo
-${PYSITELIB}/theano/gpuarray/pool_ave_grad.c
-${PYSITELIB}/theano/gpuarray/pool_grad_grad.c
-${PYSITELIB}/theano/gpuarray/pool_max_grad.c
-${PYSITELIB}/theano/gpuarray/pool_max_rop.c
 ${PYSITELIB}/theano/gpuarray/reduction.py
 ${PYSITELIB}/theano/gpuarray/reduction.pyc
 ${PYSITELIB}/theano/gpuarray/reduction.pyo
+${PYSITELIB}/theano/gpuarray/rng_mrg.py
+${PYSITELIB}/theano/gpuarray/rng_mrg.pyc
+${PYSITELIB}/theano/gpuarray/rng_mrg.pyo
+${PYSITELIB}/theano/gpuarray/sort.py
+${PYSITELIB}/theano/gpuarray/sort.pyc
+${PYSITELIB}/theano/gpuarray/sort.pyo
 ${PYSITELIB}/theano/gpuarray/subtensor.py
 ${PYSITELIB}/theano/gpuarray/subtensor.pyc
 ${PYSITELIB}/theano/gpuarray/subtensor.pyo
@@ -373,12 +404,19 @@ ${PYSITELIB}/theano/gpuarray/tests/GpuArray.pkl
 ${PYSITELIB}/theano/gpuarray/tests/__init__.py
 ${PYSITELIB}/theano/gpuarray/tests/__init__.pyc
 ${PYSITELIB}/theano/gpuarray/tests/__init__.pyo
+${PYSITELIB}/theano/gpuarray/tests/c_code/tstgpueye.c
+${PYSITELIB}/theano/gpuarray/tests/check_dnn_conv.py
+${PYSITELIB}/theano/gpuarray/tests/check_dnn_conv.pyc
+${PYSITELIB}/theano/gpuarray/tests/check_dnn_conv.pyo
 ${PYSITELIB}/theano/gpuarray/tests/config.py
 ${PYSITELIB}/theano/gpuarray/tests/config.pyc
 ${PYSITELIB}/theano/gpuarray/tests/config.pyo
 ${PYSITELIB}/theano/gpuarray/tests/rnn_support.py
 ${PYSITELIB}/theano/gpuarray/tests/rnn_support.pyc
 ${PYSITELIB}/theano/gpuarray/tests/rnn_support.pyo
+${PYSITELIB}/theano/gpuarray/tests/run_dnn_conv.py
+${PYSITELIB}/theano/gpuarray/tests/run_dnn_conv.pyc
+${PYSITELIB}/theano/gpuarray/tests/run_dnn_conv.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_abstractconv.py
 ${PYSITELIB}/theano/gpuarray/tests/test_abstractconv.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_abstractconv.pyo
@@ -394,6 +432,9 @@ ${PYSITELIB}/theano/gpuarray/tests/test_blocksparse.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_cgpukernelbase.py
 ${PYSITELIB}/theano/gpuarray/tests/test_cgpukernelbase.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_cgpukernelbase.pyo
+${PYSITELIB}/theano/gpuarray/tests/test_ctc.py
+${PYSITELIB}/theano/gpuarray/tests/test_ctc.pyc
+${PYSITELIB}/theano/gpuarray/tests/test_ctc.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_dnn.py
 ${PYSITELIB}/theano/gpuarray/tests/test_dnn.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_dnn.pyo
@@ -412,24 +453,28 @@ ${PYSITELIB}/theano/gpuarray/tests/test_gemmcorr.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_gemmcorr3d.py
 ${PYSITELIB}/theano/gpuarray/tests/test_gemmcorr3d.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_gemmcorr3d.pyo
+${PYSITELIB}/theano/gpuarray/tests/test_gpuarray_multinomial_wo_replacement.pkl
 ${PYSITELIB}/theano/gpuarray/tests/test_linalg.py
 ${PYSITELIB}/theano/gpuarray/tests/test_linalg.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_linalg.pyo
+${PYSITELIB}/theano/gpuarray/tests/test_misc.py
+${PYSITELIB}/theano/gpuarray/tests/test_misc.pyc
+${PYSITELIB}/theano/gpuarray/tests/test_misc.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_multinomial.py
 ${PYSITELIB}/theano/gpuarray/tests/test_multinomial.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_multinomial.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_neighbours.py
 ${PYSITELIB}/theano/gpuarray/tests/test_neighbours.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_neighbours.pyo
-${PYSITELIB}/theano/gpuarray/tests/test_nerv.py
-${PYSITELIB}/theano/gpuarray/tests/test_nerv.pyc
-${PYSITELIB}/theano/gpuarray/tests/test_nerv.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_nnet.py
 ${PYSITELIB}/theano/gpuarray/tests/test_nnet.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_nnet.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_opt.py
 ${PYSITELIB}/theano/gpuarray/tests/test_opt.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_opt.pyo
+${PYSITELIB}/theano/gpuarray/tests/test_others.py
+${PYSITELIB}/theano/gpuarray/tests/test_others.pyc
+${PYSITELIB}/theano/gpuarray/tests/test_others.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_pickle.py
 ${PYSITELIB}/theano/gpuarray/tests/test_pickle.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_pickle.pyo
@@ -439,16 +484,21 @@ ${PYSITELIB}/theano/gpuarray/tests/test_pool.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_reduction.py
 ${PYSITELIB}/theano/gpuarray/tests/test_reduction.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_reduction.pyo
+${PYSITELIB}/theano/gpuarray/tests/test_rng_mrg.py
+${PYSITELIB}/theano/gpuarray/tests/test_rng_mrg.pyc
+${PYSITELIB}/theano/gpuarray/tests/test_rng_mrg.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_scan.py
 ${PYSITELIB}/theano/gpuarray/tests/test_scan.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_scan.pyo
+${PYSITELIB}/theano/gpuarray/tests/test_sort.py
+${PYSITELIB}/theano/gpuarray/tests/test_sort.pyc
+${PYSITELIB}/theano/gpuarray/tests/test_sort.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_subtensor.py
 ${PYSITELIB}/theano/gpuarray/tests/test_subtensor.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_subtensor.pyo
 ${PYSITELIB}/theano/gpuarray/tests/test_type.py
 ${PYSITELIB}/theano/gpuarray/tests/test_type.pyc
 ${PYSITELIB}/theano/gpuarray/tests/test_type.pyo
-${PYSITELIB}/theano/gpuarray/tests/tstgpueye.c
 ${PYSITELIB}/theano/gpuarray/type.py
 ${PYSITELIB}/theano/gpuarray/type.pyc
 ${PYSITELIB}/theano/gpuarray/type.pyo
@@ -464,6 +514,9 @@ ${PYSITELIB}/theano/misc/__init__.pyo
 ${PYSITELIB}/theano/misc/buildbot_filter.py
 ${PYSITELIB}/theano/misc/buildbot_filter.pyc
 ${PYSITELIB}/theano/misc/buildbot_filter.pyo
+${PYSITELIB}/theano/misc/burn_gpu.py
+${PYSITELIB}/theano/misc/burn_gpu.pyc
+${PYSITELIB}/theano/misc/burn_gpu.pyo
 ${PYSITELIB}/theano/misc/check_blas.py
 ${PYSITELIB}/theano/misc/check_blas.pyc
 ${PYSITELIB}/theano/misc/check_blas.pyo
@@ -477,9 +530,6 @@ ${PYSITELIB}/theano/misc/check_multi_gpu.pyo
 ${PYSITELIB}/theano/misc/cpucount.py
 ${PYSITELIB}/theano/misc/cpucount.pyc
 ${PYSITELIB}/theano/misc/cpucount.pyo
-${PYSITELIB}/theano/misc/cudamat_utils.py
-${PYSITELIB}/theano/misc/cudamat_utils.pyc
-${PYSITELIB}/theano/misc/cudamat_utils.pyo
 ${PYSITELIB}/theano/misc/doubleop.py
 ${PYSITELIB}/theano/misc/doubleop.pyc
 ${PYSITELIB}/theano/misc/doubleop.pyo
@@ -495,9 +545,6 @@ ${PYSITELIB}/theano/misc/frozendict.pyo
 ${PYSITELIB}/theano/misc/gh_api.py
 ${PYSITELIB}/theano/misc/gh_api.pyc
 ${PYSITELIB}/theano/misc/gh_api.pyo
-${PYSITELIB}/theano/misc/gnumpy_utils.py
-${PYSITELIB}/theano/misc/gnumpy_utils.pyc
-${PYSITELIB}/theano/misc/gnumpy_utils.pyo
 ${PYSITELIB}/theano/misc/latence_gpu_transfert.py
 ${PYSITELIB}/theano/misc/latence_gpu_transfert.pyc
 ${PYSITELIB}/theano/misc/latence_gpu_transfert.pyo
@@ -510,15 +557,6 @@ ${PYSITELIB}/theano/misc/ordered_set.pyo
 ${PYSITELIB}/theano/misc/pkl_utils.py
 ${PYSITELIB}/theano/misc/pkl_utils.pyc
 ${PYSITELIB}/theano/misc/pkl_utils.pyo
-${PYSITELIB}/theano/misc/pycuda_example.py
-${PYSITELIB}/theano/misc/pycuda_example.pyc
-${PYSITELIB}/theano/misc/pycuda_example.pyo
-${PYSITELIB}/theano/misc/pycuda_init.py
-${PYSITELIB}/theano/misc/pycuda_init.pyc
-${PYSITELIB}/theano/misc/pycuda_init.pyo
-${PYSITELIB}/theano/misc/pycuda_utils.py
-${PYSITELIB}/theano/misc/pycuda_utils.pyc
-${PYSITELIB}/theano/misc/pycuda_utils.pyo
 ${PYSITELIB}/theano/misc/safe_asarray.py
 ${PYSITELIB}/theano/misc/safe_asarray.pyc
 ${PYSITELIB}/theano/misc/safe_asarray.pyo
@@ -528,30 +566,18 @@ ${PYSITELIB}/theano/misc/strutil.pyo
 ${PYSITELIB}/theano/misc/tests/__init__.py
 ${PYSITELIB}/theano/misc/tests/__init__.pyc
 ${PYSITELIB}/theano/misc/tests/__init__.pyo
-${PYSITELIB}/theano/misc/tests/test_cudamat_utils.py
-${PYSITELIB}/theano/misc/tests/test_cudamat_utils.pyc
-${PYSITELIB}/theano/misc/tests/test_cudamat_utils.pyo
-${PYSITELIB}/theano/misc/tests/test_gnumpy_utils.py
-${PYSITELIB}/theano/misc/tests/test_gnumpy_utils.pyc
-${PYSITELIB}/theano/misc/tests/test_gnumpy_utils.pyo
 ${PYSITELIB}/theano/misc/tests/test_may_share_memory.py
 ${PYSITELIB}/theano/misc/tests/test_may_share_memory.pyc
 ${PYSITELIB}/theano/misc/tests/test_may_share_memory.pyo
 ${PYSITELIB}/theano/misc/tests/test_pkl_utils.py
 ${PYSITELIB}/theano/misc/tests/test_pkl_utils.pyc
 ${PYSITELIB}/theano/misc/tests/test_pkl_utils.pyo
-${PYSITELIB}/theano/misc/tests/test_pycuda_example.py
-${PYSITELIB}/theano/misc/tests/test_pycuda_example.pyc
-${PYSITELIB}/theano/misc/tests/test_pycuda_example.pyo
-${PYSITELIB}/theano/misc/tests/test_pycuda_theano_simple.py
-${PYSITELIB}/theano/misc/tests/test_pycuda_theano_simple.pyc
-${PYSITELIB}/theano/misc/tests/test_pycuda_theano_simple.pyo
-${PYSITELIB}/theano/misc/tests/test_pycuda_utils.py
-${PYSITELIB}/theano/misc/tests/test_pycuda_utils.pyc
-${PYSITELIB}/theano/misc/tests/test_pycuda_utils.pyo
 ${PYSITELIB}/theano/misc/windows.py
 ${PYSITELIB}/theano/misc/windows.pyc
 ${PYSITELIB}/theano/misc/windows.pyo
+${PYSITELIB}/theano/pathparse.py
+${PYSITELIB}/theano/pathparse.pyc
+${PYSITELIB}/theano/pathparse.pyo
 ${PYSITELIB}/theano/printing.py
 ${PYSITELIB}/theano/printing.pyc
 ${PYSITELIB}/theano/printing.pyo
@@ -567,170 +593,12 @@ ${PYSITELIB}/theano/sandbox/blocksparse.pyo
 ${PYSITELIB}/theano/sandbox/conv.py
 ${PYSITELIB}/theano/sandbox/conv.pyc
 ${PYSITELIB}/theano/sandbox/conv.pyo
-${PYSITELIB}/theano/sandbox/cuda/GpuConv3D.py
-${PYSITELIB}/theano/sandbox/cuda/GpuConv3D.pyc
-${PYSITELIB}/theano/sandbox/cuda/GpuConv3D.pyo
-${PYSITELIB}/theano/sandbox/cuda/GpuConvGrad3D.py
-${PYSITELIB}/theano/sandbox/cuda/GpuConvGrad3D.pyc
-${PYSITELIB}/theano/sandbox/cuda/GpuConvGrad3D.pyo
-${PYSITELIB}/theano/sandbox/cuda/GpuConvTransp3D.py
-${PYSITELIB}/theano/sandbox/cuda/GpuConvTransp3D.pyc
-${PYSITELIB}/theano/sandbox/cuda/GpuConvTransp3D.pyo
 ${PYSITELIB}/theano/sandbox/cuda/__init__.py
 ${PYSITELIB}/theano/sandbox/cuda/__init__.pyc
 ${PYSITELIB}/theano/sandbox/cuda/__init__.pyo
-${PYSITELIB}/theano/sandbox/cuda/basic_ops.py
-${PYSITELIB}/theano/sandbox/cuda/basic_ops.pyc
-${PYSITELIB}/theano/sandbox/cuda/basic_ops.pyo
-${PYSITELIB}/theano/sandbox/cuda/blas.py
-${PYSITELIB}/theano/sandbox/cuda/blas.pyc
-${PYSITELIB}/theano/sandbox/cuda/blas.pyo
-${PYSITELIB}/theano/sandbox/cuda/blocksparse.py
-${PYSITELIB}/theano/sandbox/cuda/blocksparse.pyc
-${PYSITELIB}/theano/sandbox/cuda/blocksparse.pyo
-${PYSITELIB}/theano/sandbox/cuda/cnmem.cpp
-${PYSITELIB}/theano/sandbox/cuda/cnmem.h
-${PYSITELIB}/theano/sandbox/cuda/conv.cu
-${PYSITELIB}/theano/sandbox/cuda/conv_full_kernel.cu
-${PYSITELIB}/theano/sandbox/cuda/conv_kernel.cu
-${PYSITELIB}/theano/sandbox/cuda/corr3d_gemm.cu
-${PYSITELIB}/theano/sandbox/cuda/corr_gemm.cu
-${PYSITELIB}/theano/sandbox/cuda/cuda_ndarray.cu
-${PYSITELIB}/theano/sandbox/cuda/cuda_ndarray.cuh
-${PYSITELIB}/theano/sandbox/cuda/cudnn_helper.h
-${PYSITELIB}/theano/sandbox/cuda/cula.py
-${PYSITELIB}/theano/sandbox/cuda/cula.pyc
-${PYSITELIB}/theano/sandbox/cuda/cula.pyo
-${PYSITELIB}/theano/sandbox/cuda/dnn.py
-${PYSITELIB}/theano/sandbox/cuda/dnn.pyc
-${PYSITELIB}/theano/sandbox/cuda/dnn.pyo
-${PYSITELIB}/theano/sandbox/cuda/dnn_base.c
-${PYSITELIB}/theano/sandbox/cuda/dnn_conv_base.c
-${PYSITELIB}/theano/sandbox/cuda/dnn_fwd.c
-${PYSITELIB}/theano/sandbox/cuda/dnn_gi.c
-${PYSITELIB}/theano/sandbox/cuda/dnn_gw.c
-${PYSITELIB}/theano/sandbox/cuda/elemwise.py
-${PYSITELIB}/theano/sandbox/cuda/elemwise.pyc
-${PYSITELIB}/theano/sandbox/cuda/elemwise.pyo
-${PYSITELIB}/theano/sandbox/cuda/extra_ops.py
-${PYSITELIB}/theano/sandbox/cuda/extra_ops.pyc
-${PYSITELIB}/theano/sandbox/cuda/extra_ops.pyo
-${PYSITELIB}/theano/sandbox/cuda/fftconv.py
-${PYSITELIB}/theano/sandbox/cuda/fftconv.pyc
-${PYSITELIB}/theano/sandbox/cuda/fftconv.pyo
-${PYSITELIB}/theano/sandbox/cuda/kernel_codegen.py
-${PYSITELIB}/theano/sandbox/cuda/kernel_codegen.pyc
-${PYSITELIB}/theano/sandbox/cuda/kernel_codegen.pyo
-${PYSITELIB}/theano/sandbox/cuda/neighbours.py
-${PYSITELIB}/theano/sandbox/cuda/neighbours.pyc
-${PYSITELIB}/theano/sandbox/cuda/neighbours.pyo
-${PYSITELIB}/theano/sandbox/cuda/nnet.py
-${PYSITELIB}/theano/sandbox/cuda/nnet.pyc
-${PYSITELIB}/theano/sandbox/cuda/nnet.pyo
-${PYSITELIB}/theano/sandbox/cuda/nvcc_compiler.py
-${PYSITELIB}/theano/sandbox/cuda/nvcc_compiler.pyc
-${PYSITELIB}/theano/sandbox/cuda/nvcc_compiler.pyo
-${PYSITELIB}/theano/sandbox/cuda/opt.py
-${PYSITELIB}/theano/sandbox/cuda/opt.pyc
-${PYSITELIB}/theano/sandbox/cuda/opt.pyo
-${PYSITELIB}/theano/sandbox/cuda/opt_util.py
-${PYSITELIB}/theano/sandbox/cuda/opt_util.pyc
-${PYSITELIB}/theano/sandbox/cuda/opt_util.pyo
-${PYSITELIB}/theano/sandbox/cuda/rng_curand.py
-${PYSITELIB}/theano/sandbox/cuda/rng_curand.pyc
-${PYSITELIB}/theano/sandbox/cuda/rng_curand.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/CudaNdarray.pkl
-${PYSITELIB}/theano/sandbox/cuda/tests/__init__.py
-${PYSITELIB}/theano/sandbox/cuda/tests/__init__.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/__init__.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/old_pool_interface.pkl
-${PYSITELIB}/theano/sandbox/cuda/tests/test_abstractconv.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_abstractconv.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_abstractconv.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_basic_ops.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_basic_ops.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_basic_ops.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_bench_loopfusion.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_bench_loopfusion.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_bench_loopfusion.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_blas.py
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-${PYSITELIB}/theano/sandbox/cuda/tests/test_blocksparse.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_blocksparse.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_blocksparse.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_conv_cuda_ndarray.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_conv_cuda_ndarray.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_conv_cuda_ndarray.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_cuda_ndarray.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_cuda_ndarray.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_cuda_ndarray.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_cula.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_cula.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_cula.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_dnn.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_dnn.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_dnn.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_driver.py
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-${PYSITELIB}/theano/sandbox/cuda/tests/test_fftconv.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_fftconv.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_fftconv.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_gemmcorr3d.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_gemmcorr3d.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_gemmcorr3d.pyo
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-${PYSITELIB}/theano/sandbox/cuda/tests/test_gradient.pyc
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-${PYSITELIB}/theano/sandbox/cuda/tests/test_memory.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_memory.pyc
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-${PYSITELIB}/theano/sandbox/cuda/tests/test_mlp.py
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-${PYSITELIB}/theano/sandbox/cuda/tests/test_mlp.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_neighbours.py
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-${PYSITELIB}/theano/sandbox/cuda/tests/test_nnet.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_nnet.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_nnet.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_opt.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_opt.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_opt.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_rng_curand.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_rng_curand.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_rng_curand.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_tensor_op.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_tensor_op.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_tensor_op.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_type.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_type.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_type.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_var.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_var.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_var.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/test_viewop.py
-${PYSITELIB}/theano/sandbox/cuda/tests/test_viewop.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/test_viewop.pyo
-${PYSITELIB}/theano/sandbox/cuda/tests/walltime.py
-${PYSITELIB}/theano/sandbox/cuda/tests/walltime.pyc
-${PYSITELIB}/theano/sandbox/cuda/tests/walltime.pyo
-${PYSITELIB}/theano/sandbox/cuda/type.py
-${PYSITELIB}/theano/sandbox/cuda/type.pyc
-${PYSITELIB}/theano/sandbox/cuda/type.pyo
-${PYSITELIB}/theano/sandbox/cuda/var.py
-${PYSITELIB}/theano/sandbox/cuda/var.pyc
-${PYSITELIB}/theano/sandbox/cuda/var.pyo
 ${PYSITELIB}/theano/sandbox/fourier.py
 ${PYSITELIB}/theano/sandbox/fourier.pyc
 ${PYSITELIB}/theano/sandbox/fourier.pyo
-${PYSITELIB}/theano/sandbox/gpuarray/__init__.py
-${PYSITELIB}/theano/sandbox/gpuarray/__init__.pyc
-${PYSITELIB}/theano/sandbox/gpuarray/__init__.pyo
 ${PYSITELIB}/theano/sandbox/linalg/__init__.py
 ${PYSITELIB}/theano/sandbox/linalg/__init__.pyc
 ${PYSITELIB}/theano/sandbox/linalg/__init__.pyo
@@ -775,6 +643,7 @@ ${PYSITELIB}/theano/sandbox/tests/test_multinomial_wo_replacement.pyo
 ${PYSITELIB}/theano/sandbox/tests/test_rng_mrg.py
 ${PYSITELIB}/theano/sandbox/tests/test_rng_mrg.pyc
 ${PYSITELIB}/theano/sandbox/tests/test_rng_mrg.pyo
+${PYSITELIB}/theano/sandbox/tests/test_sandbox_multinomial_wo_replacement.pkl
 ${PYSITELIB}/theano/scalar/__init__.py
 ${PYSITELIB}/theano/scalar/__init__.pyc
 ${PYSITELIB}/theano/scalar/__init__.pyo
@@ -808,6 +677,7 @@ ${PYSITELIB}/theano/scalar/tests/test_div_no_future.pyo
 ${PYSITELIB}/theano/scan_module/__init__.py
 ${PYSITELIB}/theano/scan_module/__init__.pyc
 ${PYSITELIB}/theano/scan_module/__init__.pyo
+${PYSITELIB}/theano/scan_module/c_code/scan_perform.c
 ${PYSITELIB}/theano/scan_module/scan.py
 ${PYSITELIB}/theano/scan_module/scan.pyc
 ${PYSITELIB}/theano/scan_module/scan.pyo
@@ -820,7 +690,6 @@ ${PYSITELIB}/theano/scan_module/scan_op.pyo
 ${PYSITELIB}/theano/scan_module/scan_opt.py
 ${PYSITELIB}/theano/scan_module/scan_opt.pyc
 ${PYSITELIB}/theano/scan_module/scan_opt.pyo
-${PYSITELIB}/theano/scan_module/scan_perform.c
 ${PYSITELIB}/theano/scan_module/scan_perform_ext.py
 ${PYSITELIB}/theano/scan_module/scan_perform_ext.pyc
 ${PYSITELIB}/theano/scan_module/scan_perform_ext.pyo
@@ -833,7 +702,6 @@ ${PYSITELIB}/theano/scan_module/scan_views.pyo
 ${PYSITELIB}/theano/scan_module/tests/__init__.py
 ${PYSITELIB}/theano/scan_module/tests/__init__.pyc
 ${PYSITELIB}/theano/scan_module/tests/__init__.pyo
-${PYSITELIB}/theano/scan_module/tests/inconsistent_scan.pkl
 ${PYSITELIB}/theano/scan_module/tests/test_scan.py
 ${PYSITELIB}/theano/scan_module/tests/test_scan.pyc
 ${PYSITELIB}/theano/scan_module/tests/test_scan.pyo
@@ -900,8 +768,6 @@ ${PYSITELIB}/theano/sparse/utils.pyo
 ${PYSITELIB}/theano/tensor/__init__.py
 ${PYSITELIB}/theano/tensor/__init__.pyc
 ${PYSITELIB}/theano/tensor/__init__.pyo
-${PYSITELIB}/theano/tensor/alt_gemm_common.c
-${PYSITELIB}/theano/tensor/alt_gemm_template.c
 ${PYSITELIB}/theano/tensor/basic.py
 ${PYSITELIB}/theano/tensor/basic.pyc
 ${PYSITELIB}/theano/tensor/basic.pyo
@@ -917,6 +783,9 @@ ${PYSITELIB}/theano/tensor/blas_headers.pyo
 ${PYSITELIB}/theano/tensor/blas_scipy.py
 ${PYSITELIB}/theano/tensor/blas_scipy.pyc
 ${PYSITELIB}/theano/tensor/blas_scipy.pyo
+${PYSITELIB}/theano/tensor/c_code/alt_blas_common.h
+${PYSITELIB}/theano/tensor/c_code/alt_blas_template.c
+${PYSITELIB}/theano/tensor/c_code/dimshuffle.c
 ${PYSITELIB}/theano/tensor/elemwise.py
 ${PYSITELIB}/theano/tensor/elemwise.pyc
 ${PYSITELIB}/theano/tensor/elemwise.pyo
@@ -932,6 +801,9 @@ ${PYSITELIB}/theano/tensor/fft.pyo
 ${PYSITELIB}/theano/tensor/fourier.py
 ${PYSITELIB}/theano/tensor/fourier.pyc
 ${PYSITELIB}/theano/tensor/fourier.pyo
+${PYSITELIB}/theano/tensor/inc_code.py
+${PYSITELIB}/theano/tensor/inc_code.pyc
+${PYSITELIB}/theano/tensor/inc_code.pyo
 ${PYSITELIB}/theano/tensor/inplace.py
 ${PYSITELIB}/theano/tensor/inplace.pyc
 ${PYSITELIB}/theano/tensor/inplace.pyo
@@ -941,15 +813,6 @@ ${PYSITELIB}/theano/tensor/io.pyo
 ${PYSITELIB}/theano/tensor/nlinalg.py
 ${PYSITELIB}/theano/tensor/nlinalg.pyc
 ${PYSITELIB}/theano/tensor/nlinalg.pyo
-${PYSITELIB}/theano/tensor/nnet/Conv3D.py
-${PYSITELIB}/theano/tensor/nnet/Conv3D.pyc
-${PYSITELIB}/theano/tensor/nnet/Conv3D.pyo
-${PYSITELIB}/theano/tensor/nnet/ConvGrad3D.py
-${PYSITELIB}/theano/tensor/nnet/ConvGrad3D.pyc
-${PYSITELIB}/theano/tensor/nnet/ConvGrad3D.pyo
-${PYSITELIB}/theano/tensor/nnet/ConvTransp3D.py
-${PYSITELIB}/theano/tensor/nnet/ConvTransp3D.pyc
-${PYSITELIB}/theano/tensor/nnet/ConvTransp3D.pyo
 ${PYSITELIB}/theano/tensor/nnet/__init__.py
 ${PYSITELIB}/theano/tensor/nnet/__init__.pyc
 ${PYSITELIB}/theano/tensor/nnet/__init__.pyo
@@ -962,6 +825,9 @@ ${PYSITELIB}/theano/tensor/nnet/blocksparse.pyo
 ${PYSITELIB}/theano/tensor/nnet/bn.py
 ${PYSITELIB}/theano/tensor/nnet/bn.pyc
 ${PYSITELIB}/theano/tensor/nnet/bn.pyo
+${PYSITELIB}/theano/tensor/nnet/c_code/corr3d_gemm.c
+${PYSITELIB}/theano/tensor/nnet/c_code/corr_gemm.c
+${PYSITELIB}/theano/tensor/nnet/c_code/ctc_wrapper.c
 ${PYSITELIB}/theano/tensor/nnet/conv.py
 ${PYSITELIB}/theano/tensor/nnet/conv.pyc
 ${PYSITELIB}/theano/tensor/nnet/conv.pyo
@@ -974,8 +840,9 @@ ${PYSITELIB}/theano/tensor/nnet/corr.pyo
 ${PYSITELIB}/theano/tensor/nnet/corr3d.py
 ${PYSITELIB}/theano/tensor/nnet/corr3d.pyc
 ${PYSITELIB}/theano/tensor/nnet/corr3d.pyo
-${PYSITELIB}/theano/tensor/nnet/corr3d_gemm.c
-${PYSITELIB}/theano/tensor/nnet/corr_gemm.c
+${PYSITELIB}/theano/tensor/nnet/ctc.py
+${PYSITELIB}/theano/tensor/nnet/ctc.pyc
+${PYSITELIB}/theano/tensor/nnet/ctc.pyo
 ${PYSITELIB}/theano/tensor/nnet/neighbours.py
 ${PYSITELIB}/theano/tensor/nnet/neighbours.pyc
 ${PYSITELIB}/theano/tensor/nnet/neighbours.pyo
@@ -1006,9 +873,6 @@ ${PYSITELIB}/theano/tensor/nnet/tests/test_bn.pyo
 ${PYSITELIB}/theano/tensor/nnet/tests/test_conv.py
 ${PYSITELIB}/theano/tensor/nnet/tests/test_conv.pyc
 ${PYSITELIB}/theano/tensor/nnet/tests/test_conv.pyo
-${PYSITELIB}/theano/tensor/nnet/tests/test_conv3d.py
-${PYSITELIB}/theano/tensor/nnet/tests/test_conv3d.pyc
-${PYSITELIB}/theano/tensor/nnet/tests/test_conv3d.pyo
 ${PYSITELIB}/theano/tensor/nnet/tests/test_conv3d2d.py
 ${PYSITELIB}/theano/tensor/nnet/tests/test_conv3d2d.pyc
 ${PYSITELIB}/theano/tensor/nnet/tests/test_conv3d2d.pyo
@@ -1018,6 +882,9 @@ ${PYSITELIB}/theano/tensor/nnet/tests/test_corr.pyo
 ${PYSITELIB}/theano/tensor/nnet/tests/test_corr3d.py
 ${PYSITELIB}/theano/tensor/nnet/tests/test_corr3d.pyc
 ${PYSITELIB}/theano/tensor/nnet/tests/test_corr3d.pyo
+${PYSITELIB}/theano/tensor/nnet/tests/test_ctc.py
+${PYSITELIB}/theano/tensor/nnet/tests/test_ctc.pyc
+${PYSITELIB}/theano/tensor/nnet/tests/test_ctc.pyo
 ${PYSITELIB}/theano/tensor/nnet/tests/test_neighbours.py
 ${PYSITELIB}/theano/tensor/nnet/tests/test_neighbours.pyc
 ${PYSITELIB}/theano/tensor/nnet/tests/test_neighbours.pyo
@@ -1082,7 +949,6 @@ ${PYSITELIB}/theano/tensor/tests/_test_mpi_roundtrip.pyo
 ${PYSITELIB}/theano/tensor/tests/mlp_test.py
 ${PYSITELIB}/theano/tensor/tests/mlp_test.pyc
 ${PYSITELIB}/theano/tensor/tests/mlp_test.pyo
-${PYSITELIB}/theano/tensor/tests/shape_opt_cycle.pkl
 ${PYSITELIB}/theano/tensor/tests/test_basic.py
 ${PYSITELIB}/theano/tensor/tests/test_basic.pyc
 ${PYSITELIB}/theano/tensor/tests/test_basic.pyo
diff --git a/py-theano/distinfo b/py-theano/distinfo
index dc4b5205dc..c3bd08cab8 100644
--- a/py-theano/distinfo
+++ b/py-theano/distinfo
@@ -1,6 +1,6 @@
 $NetBSD: distinfo,v 1.2 2015/01/26 21:21:52 jihbed Exp $
 
-SHA1 (Theano-0.9.0.tar.gz) = 0b01e8a2454b9b7209466acf8267a5894fe49d6a
-RMD160 (Theano-0.9.0.tar.gz) = 668f68ff2333d1c0f259761288b7accc07993a6b
-SHA512 (Theano-0.9.0.tar.gz) = e0e59256d2442f929fb120b4b21cab735e0a8ba087c4ea7d7caeabe8fa30cc19a46181fe1b4e268e778344fb3506eb20d8090dfc8d2a499c1bf84b07352686ab
-Size (Theano-0.9.0.tar.gz) = 3116713 bytes
+SHA1 (Theano-1.0.2.tar.gz) = 906b9e1c75fe0f068f358d409bf15e3a37886ecc
+RMD160 (Theano-1.0.2.tar.gz) = ca27d476104ba2e1d6f240986473d6e13d7e03ea
+SHA512 (Theano-1.0.2.tar.gz) = 02bcb13fc69ff445a9d893e1fe3935bcd6f5e1efc8b4ab2f2ecfe19234a68f8a4b8e701444d619dc90d2414aa54f485aa86d09e2f08a753f179bd9607985920b
+Size (Theano-1.0.2.tar.gz) = 13056284 bytes
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