CVS commit: pkgsrc/biology/vcf2hap

["Jason Bacon" <bacon%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   bacon
Date:           Fri Nov 29 15:37:57 UTC 2024

Modified Files:
        pkgsrc/biology/vcf2hap: Makefile PLIST distinfo

Log Message:
biology/vcf2hap: Update to 0.1.6.14

Unbreak build when using non-default PKGMANDIR


To generate a diff of this commit:
cvs rdiff -u -r1.8 -r1.9 pkgsrc/biology/vcf2hap/Makefile
cvs rdiff -u -r1.7 -r1.8 pkgsrc/biology/vcf2hap/PLIST
cvs rdiff -u -r1.9 -r1.10 pkgsrc/biology/vcf2hap/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/vcf2hap/Makefile
diff -u pkgsrc/biology/vcf2hap/Makefile:1.8 pkgsrc/biology/vcf2hap/Makefile:1.9
--- pkgsrc/biology/vcf2hap/Makefile:1.8 Sat Oct 28 20:41:05 2023
+++ pkgsrc/biology/vcf2hap/Makefile     Fri Nov 29 15:37:57 2024
@@ -1,19 +1,16 @@
-# $NetBSD: Makefile,v 1.8 2023/10/28 20:41:05 bacon Exp $
+# $NetBSD: Makefile,v 1.9 2024/11/29 15:37:57 bacon Exp $
 
-DISTNAME=      vcf2hap-0.1.6.7
+DISTNAME=      vcf2hap-0.1.6.14
 CATEGORIES=    biology
 MASTER_SITES=  ${MASTER_SITE_GITHUB:=auerlab/}
-GITHUB_TAG=    2cc4a97bb3b08e1c336578b36af5970ce98c931a
+GITHUB_TAG=    8f3998572c360c74be44d47258659bbd00374286
 
 OWNER=         bacon%NetBSD.org@localhost
 HOMEPAGE=      https://github.com/auerlab/vcf2hap
 COMMENT=       Generate .hap file from VCF for haplohseq
 LICENSE=       2-clause-bsd
 
-MAKE_ENV+=     VERSION=${PKGVERSION}
-
-pre-build:
-       cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend
+MAKE_ENV+=     MANDIR=${PREFIX}/${PKGMANDIR} VERSION=${PKGVERSION}
 
 do-test:
        cd ${WRKSRC}/Test && ./run-test.sh

Index: pkgsrc/biology/vcf2hap/PLIST
diff -u pkgsrc/biology/vcf2hap/PLIST:1.7 pkgsrc/biology/vcf2hap/PLIST:1.8
--- pkgsrc/biology/vcf2hap/PLIST:1.7    Sat Oct 28 20:41:05 2023
+++ pkgsrc/biology/vcf2hap/PLIST        Fri Nov 29 15:37:57 2024
@@ -1,3 +1,3 @@
-@comment $NetBSD: PLIST,v 1.7 2023/10/28 20:41:05 bacon Exp $
+@comment $NetBSD: PLIST,v 1.8 2024/11/29 15:37:57 bacon Exp $
 bin/vcf2hap
 man/man1/vcf2hap.1

Index: pkgsrc/biology/vcf2hap/distinfo
diff -u pkgsrc/biology/vcf2hap/distinfo:1.9 pkgsrc/biology/vcf2hap/distinfo:1.10
--- pkgsrc/biology/vcf2hap/distinfo:1.9 Sat Oct 28 20:41:05 2023
+++ pkgsrc/biology/vcf2hap/distinfo     Fri Nov 29 15:37:57 2024
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.9 2023/10/28 20:41:05 bacon Exp $
+$NetBSD: distinfo,v 1.10 2024/11/29 15:37:57 bacon Exp $
 
-BLAKE2s (vcf2hap-0.1.6.7-2cc4a97bb3b08e1c336578b36af5970ce98c931a.tar.gz) = 66fde28214ca9dfd9833d178893c414c607d881fcafd368191034dc9dab34f3b
-SHA512 (vcf2hap-0.1.6.7-2cc4a97bb3b08e1c336578b36af5970ce98c931a.tar.gz) = 
921b4272c7523803831f3d16879eeea4ce5e3903c9ff69596aa6b3eb94b61df8ab4b1b0f03e7b904749ae3579e6f9cf364edfb998c22bf839a766c0de3654aa9
-Size (vcf2hap-0.1.6.7-2cc4a97bb3b08e1c336578b36af5970ce98c931a.tar.gz) = 201287 bytes
+BLAKE2s (vcf2hap-0.1.6.14-8f3998572c360c74be44d47258659bbd00374286.tar.gz) = 76ab6712b092fbbcbe41e2cf6d2e4c4e3ea21a48653ebf2917668f1bf41fdecc
+SHA512 (vcf2hap-0.1.6.14-8f3998572c360c74be44d47258659bbd00374286.tar.gz) = 
c6d6946c3bce3ca01aed4ad386a2333b6628b485f15fb9ec9d863366c521f85489c74c90c68371a45e4d3c422522894796c996622735487ef67321f7f015436c
+Size (vcf2hap-0.1.6.14-8f3998572c360c74be44d47258659bbd00374286.tar.gz) = 200907 bytes