CVS commit: pkgsrc/math/R

["Makoto Fujiwara" <mef%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   mef
Date:           Mon May 27 20:45:15 UTC 2024

Modified Files:
        pkgsrc/math/R: Makefile PLIST distinfo
        pkgsrc/math/R/patches: patch-configure.ac patch-m4_R.m4

Log Message:
(math/R) Updated 4.3.3. to 4.4.0

NEWS for R version 4.4.0 (2024-04-24)

CHANGES IN R 4.4.0
SIGNIFICANT USER-VISIBLE CHANGES:
*   Startup banners, R --version, sessionInfo() and R CMD check no longer report
    (64-bit) as part of the platform as this is almost universal – the increasingly rare
    32-bit platforms will still report (32-bit).
    On Windows, ditto for window titles.

*   is.atomic(NULL) now returns FALSE, as NULL is not an atomic vector.
    Strict back-compatibility would replace is.atomic(foo) by (is.null(foo) ||
    is.atomic(foo)) but should happen only sparingly.
    NEW FEATURES:

*   The confint() methods for "glm" and "nls" objects have been copied to the
    stats package. Previously, they were stubs which called versions in package MASS.
    The MASS namespace is no longer loaded if you invoke (say) confint(glmfit).
    Further, the "glm" method for profile() and the plot() and pairs() methods
    for class "profile" have been copied from MASS to stats. (profile.nls() and
    plot.profile.nls() were already in stats.)

*   The confint() and profile methods for "glm" objects have gained a possibility to
    do profiling based on the Rao Score statistic in addition to the default Likelihood
    Ratio. This is controlled by a new test = argument.

* The pairs() method for "profile" objects has been extended with a
    which = argument to allow plotting only a subset of the
    parameters.

* The "glm" method for anova() computes test statistics and p-values
  by default, using a chi-squared test or an F test depending on whether
  the dispersion is fixed or free.  Test statistics can be suppressed by
  giving argument test a false logical value.

* In setRepositories() the repositories can be set using their names
    via name = instead of index ind =.

* methods() and .S3methods() gain a all.names option for the (rare)
  case where functions starting with a ‘.’ should be included.

* Serializations can now be interrupted (e.g., by Ctrl-C on a
  Unix-alike) if they take too long, e.g., from save.image(), thanks to
  suggestions by Ivan Krylov and others on R-devel.

* New startup option ‘--max-connections’ to set the maximum number of
  simultaneous connections for the session. Defaults to 128 as before:
  allowed values up to 4096 (but resource limits may in practice
  restrict to smaller values).

* R on Windows (since Windows 10 2004) now uses the new Segment Heap
  allocator.  This may improve performance of some memory-intensive
  applications.

* When R packages are built, typically by R CMD build <pkg>, the new
  --user=<build_user> option overrides the (internally determined) user
  name, currently Sys.info()["user"] or LOGNAME. This is a (modified)
  fulfillment of Will Landau’s suggestion in PR#17530.

* tools::testInstalledBasic() gets new optional arguments outDir and
  testSrcdir, e.g., allowing to use it in a builddir != srcdir setup,
  and in standard “binary” Windows installation if a source ‘tests/’
  folder is present.

* range(<DT_with_Inf>, finite = TRUE) now work for objects of class
  "Date", "POSIXct", and "POSIXlt" with infinite entries, analogously to
  range.default(), as proposed by Davis Vaughan on R-devel. Other
  range()-methods can make use of new function .rangeNum().

* New .internalGenerics object complementing .S3PrimitiveGenerics, for
    documentation and low-level book-keeping.

* grid() now invisibly returns the x- and y- coordinates at which the
  grid-lines were drawn.

*   norm(., type) now also works for complex matrices.

* kappa(., exact = TRUE, norm = *) now works for all norms and also
  for complex matrices. In symmetric / triangular cases, the new
  argument uplo = "U" | "L" allows the upper or lower triangular part to
  be specified.

* memDecompress(type = "unknown") recognizes compression in the
    default ‘zlib’ format as used by memCompress(type = "gzip").

* memCompress() and memDecompress() will use the libdeflate library
  (https: //github.com/ebiggers/libdeflate) if installed. This uses the
  same type of compression for type = "gzip" but is 1.5-2x faster than
  the system libz library on some common platforms: the speed-up may
  depend on the library version.

* diff() for objects of class "Date", "POSIXct", and "POSIXlt" accepts
    a units argument passed via ....

* Dynamic help now does a much better job of rendering package
    ‘DESCRIPTION’ metadata.

* Rprof() gains an event argument and support for elapsed (real) time
profiling on Unix (PR#18076).

*   filled.contour() gains a key.border argument.

* tools::update_pkg_po() gets arguments pot_make and mo_make for not
  re-making the corresponding files, and additionally a verbose
  argument.

* Hexadecimal string colour specifications are now accepted in short
  form, so, for example, we can use "#123", which is equivalent to
  "#112233".  Thanks to MikeFC for the original idea and Ella Kaye,
  Malcolm Barrett, George Stagg, and Hanne Oberman for the patch.

*   Plain-text help shows \var markup by angle brackets.

* The new experimental primitive function declare() is intended to
  eventually allow information about R code to be communicated to the
  interpreter, compiler, and code analysis tools. The syntax for
  declarations is still being developed.

* Functions psmirnov(), qsmirnov() and rsmirnov() in package stats
  have had argument two.sided renamed to alternative, to take into
  account that the permutation distributions of the one-sided statistics
  can be different in the case of ties. Consequence of PR#18582.

*   sort() is now an implicit S4 generic in methods.

* Formatting and printing, format(z), print(z), of complex vectors z
  no longer zap relatively small real or imaginary parts to zero, fixing
  PR#16752. This is an API change, as it was documented previously to
  round real and imaginary parts together on purpose, producing nicer
  looking output. As mentioned, e.g. in the PR, this change is
  compatible with many other “R-like” programming environments.  We have
  simplified the internal code and now basically format the real and
  imaginary parts independently of each other.

* New experimental functions Tailcall() and Exec() to support writing
    stack-spaceefficient recursive functions.

* Where characters are attempted to be plotted by pdf(), postscript()
  and xfig() which are not in the selected 8-bit character set (most
  often Latin-1) and the R session is using a UTF-8 locale, the warning
  messages will show the UTF-8 character rather than its bytes and one
  dot will be substituted per character rather than per byte.
  (Platforms whose iconv() does transliteration silently plot the
  transliteration.)  In a UTF-8 locale some transliterations are now
  done with a warning (e.g., dashes and Unicode minus to hyphen,
  ligatures are expanded, permille (‘‰’) is replaced by ‘o/oo’),
  although the OS may have got there first. These are warnings as they
  will continue to be replaced by dots in earlier versions of R.

* The matrix multiplication functions crossprod() and tcrossprod() are
  now also primitive and S3 generic, as %*% had become in R 4.3.0.

* source() and example() have a new optional argument catch.aborts
  which allows continued evaluation of the R code after an error.

* The non-Quartz tiff() devices allow additional types of compression
  if supported by the platform’s ‘libtiff’ library.

*   The list of base and recommended package names is now provided by
    tools::standard_package_names().

* cairo_pdf() and cairo_ps() default to onefile = TRUE to closer match
  pdf() and postscript().

* New option catch.script.errors provides a documented way to catch
  errors and then continue in non-interactive use.

* L %||% R newly in base is an expressive idiom for the phrases
  if(!is.null(L)) L else R or if(is.null(L)) R else L.

* The return value from warnings() now always inherits from "warnings"
    as documented, now also in the case of no warnings where it
    previously returned NULL.

*   as.complex("1i") now returns 0 + 1i instead of NA with a warning.

* z <- c(NA, 1i) now keeps the imaginary part Im(z[1]) == 0, no longer
  coercing to NA_complex_. Similarly, cumsum(z) correctly sums real and
  imaginary parts separately, i.e., without “crosstalk” in case of NAs.

*   On Alpine Linux iconv() now maps "latin2", "latin-2", "latin9" and "latin-9"
    to encoding names the OS knows about (case-insensitively).

* iconv(sub = "Unicode") now always zero-pads to four (hex) digits,
  rather than to 4 or 8. (This seems to have become the convention
  once Unicode restricted the number of Unicode points to 221 − 1
  and so will never need more than 6 digits.)

*   NCOL(NULL) now returns 0 instead of 1, for consistency with cbind().

* The information for the Euro glyph missing from the Adobe ‘.afm’
  files for the Courier, Helvetica and Times families has been copied
  from their URW equivalents – this will improve vertical centring in
  the pdf() and postscript() devices.

* The included BLAS sources have been updated to those shipped with
  LAPACK version 3.12.0. The changes are almost entirely cosmetic.

*   The included LAPACK sources have been updated to version 3.12.0 and some further
double-complex routines added.

* There are new font families for the 2014–5 URW 2.0 fonts (see ?pdf)
  which are included in recent versions of Ghostscript. These have font
  widths for most Greek glyphs and a few others which were missing from
  the original versions (whose font families remain available for
  reproducibility, although Ghostscript-based viewers will render using
  the 2.0 versions).

* Improve the large-n efficiency of as.matrix(<dist>), thanks an R
  contributors effort, notably by Tim Taylor and Heather Turner, see
  PR#18660.

*   The default and numeric methods of all.equal() get a check.class option.

* zapsmall() gets new optional arguments, function mFUN and min.d, for
  extra flexibility; fulfills a wish in PR#18199. Also, it is now an
  implicit S4 generic in package methods.

*   The Rd filter for aspell() gains an ignore argument.

* New generic function sort_by(), primarily useful for the data.frame
  method which can be used to sort rows of a data frame by one or more
  columns.

*   The icence headers for the RPC code in ‘src/extra/xdr’ have been updated to use
    the GPL-compatible licence published by Oracle America in 2010.

*   New function pkg2HTML() in tools to create single-page HTML reference manuals for
    R packages.

* The byte code evaluator now uses less C stack space for recursive
  calls to bytecompiled functions. It also makes more of an effort to
  avoid allocations for scalar return values.

* New completion option backtick (disabled by default) allows
  non-syntactic completions to be wrapped in backquotes. This is
  currently only useful for Jupyter notebooks via the IRkernel package,
  and may cause problems for other backends.


To generate a diff of this commit:
cvs rdiff -u -r1.254 -r1.255 pkgsrc/math/R/Makefile
cvs rdiff -u -r1.38 -r1.39 pkgsrc/math/R/PLIST
cvs rdiff -u -r1.105 -r1.106 pkgsrc/math/R/distinfo
cvs rdiff -u -r1.8 -r1.9 pkgsrc/math/R/patches/patch-configure.ac
cvs rdiff -u -r1.5 -r1.6 pkgsrc/math/R/patches/patch-m4_R.m4

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/math/R/Makefile
diff -u pkgsrc/math/R/Makefile:1.254 pkgsrc/math/R/Makefile:1.255
--- pkgsrc/math/R/Makefile:1.254        Thu May 16 06:15:08 2024
+++ pkgsrc/math/R/Makefile      Mon May 27 20:45:14 2024
@@ -1,11 +1,10 @@
-# $NetBSD: Makefile,v 1.254 2024/05/16 06:15:08 wiz Exp $
+# $NetBSD: Makefile,v 1.255 2024/05/27 20:45:14 mef Exp $
 
 #
 # If updating this package, please try to ensure PLIST.Darwin is kept in sync
 # to avoid unnecessarily breaking macOS users.
 #
-DISTNAME=      R-4.3.3
-PKGREVISION=   1
+DISTNAME=      R-4.4.0
 CATEGORIES=    math
 MASTER_SITES=  ${MASTER_SITE_R_CRAN:=base/R-4/}
 
@@ -150,10 +149,10 @@ INSTALL_SCRIPT=           ${INSTALL} ${COPY} -m $
 #TOOL_DEPENDS+=                tex-mptopdf-[0-9]*:../../graphics/tex-mptopdf
 #TOOL_DEPENDS+=                tex-pdftex-def-[0-9]*:../../print/tex-pdftex
 
-SUBST_CLASSES+=                rpath
-SUBST_STAGE.rpath=     pre-configure
-SUBST_FILES.rpath=     configure.ac
-SUBST_VARS.rpath=      COMPILER_RPATH_FLAG
+#SUBST_CLASSES+=               rpath
+#SUBST_STAGE.rpath=    pre-configure
+#SUBST_FILES.rpath=    configure.ac
+#SUBST_VARS.rpath=     COMPILER_RPATH_FLAG
 
 SUBST_CLASSES+=                fixwrap
 SUBST_STAGE.fixwrap=   post-build

Index: pkgsrc/math/R/PLIST
diff -u pkgsrc/math/R/PLIST:1.38 pkgsrc/math/R/PLIST:1.39
--- pkgsrc/math/R/PLIST:1.38    Sun Apr 28 14:26:43 2024
+++ pkgsrc/math/R/PLIST Mon May 27 20:45:14 2024
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.38 2024/04/28 14:26:43 mef Exp $
+@comment $NetBSD: PLIST,v 1.39 2024/05/27 20:45:14 mef Exp $
 bin/R
 bin/Rscript
 info/R-FAQ.info.gz
@@ -56,6 +56,7 @@ lib/R/doc/THANKS
 lib/R/doc/html/NEWS.2.html
 lib/R/doc/html/NEWS.3.html
 lib/R/doc/html/NEWS.html
+lib/R/doc/html/R-nav.css
 lib/R/doc/html/R.css
 lib/R/doc/html/Rlogo.pdf
 lib/R/doc/html/Rlogo.svg
@@ -133,6 +134,7 @@ lib/R/doc/html/katex/katex.js
 lib/R/doc/html/left.jpg
 lib/R/doc/html/logo.jpg
 lib/R/doc/html/mathjax-config.js
+lib/R/doc/html/orcid.svg
 lib/R/doc/html/packages-head-utf8.html
 lib/R/doc/html/prism.css
 lib/R/doc/html/prism.js
@@ -307,11 +309,31 @@ lib/R/library/Matrix/doc/Intro2Matrix.pd
 lib/R/library/Matrix/doc/Introduction.R
 lib/R/library/Matrix/doc/Introduction.Rnw
 lib/R/library/Matrix/doc/Introduction.pdf
-lib/R/library/Matrix/doc/SuiteSparse/AMD.txt
-lib/R/library/Matrix/doc/SuiteSparse/CHOLMOD.txt
-lib/R/library/Matrix/doc/SuiteSparse/COLAMD.txt
-lib/R/library/Matrix/doc/SuiteSparse/SPQR.txt
-lib/R/library/Matrix/doc/SuiteSparse/SuiteSparse_config.txt
+lib/R/library/Matrix/doc/SuiteSparse/AMD/Doc/ChangeLog
+lib/R/library/Matrix/doc/SuiteSparse/AMD/Doc/License.txt
+lib/R/library/Matrix/doc/SuiteSparse/AMD/README.txt
+lib/R/library/Matrix/doc/SuiteSparse/CAMD/Doc/ChangeLog
+lib/R/library/Matrix/doc/SuiteSparse/CAMD/Doc/License.txt
+lib/R/library/Matrix/doc/SuiteSparse/CAMD/README.txt
+lib/R/library/Matrix/doc/SuiteSparse/CCOLAMD/Doc/ChangeLog
+lib/R/library/Matrix/doc/SuiteSparse/CCOLAMD/Doc/License.txt
+lib/R/library/Matrix/doc/SuiteSparse/CCOLAMD/README.txt
+lib/R/library/Matrix/doc/SuiteSparse/CHOLMOD/Doc/ChangeLog
+lib/R/library/Matrix/doc/SuiteSparse/CHOLMOD/Doc/License.txt
+lib/R/library/Matrix/doc/SuiteSparse/CHOLMOD/README.txt
+lib/R/library/Matrix/doc/SuiteSparse/CHOLMOD/SuiteSparse_metis/Changelog
+lib/R/library/Matrix/doc/SuiteSparse/CHOLMOD/SuiteSparse_metis/LICENSE.txt
+lib/R/library/Matrix/doc/SuiteSparse/CHOLMOD/SuiteSparse_metis/README.txt
+lib/R/library/Matrix/doc/SuiteSparse/COLAMD/Doc/ChangeLog
+lib/R/library/Matrix/doc/SuiteSparse/COLAMD/Doc/License.txt
+lib/R/library/Matrix/doc/SuiteSparse/COLAMD/README.txt
+lib/R/library/Matrix/doc/SuiteSparse/CXSparse/Doc/ChangeLog
+lib/R/library/Matrix/doc/SuiteSparse/CXSparse/Doc/License.txt
+lib/R/library/Matrix/doc/SuiteSparse/CXSparse/README.txt
+lib/R/library/Matrix/doc/SuiteSparse/ChangeLog
+lib/R/library/Matrix/doc/SuiteSparse/LICENSE.txt
+lib/R/library/Matrix/doc/SuiteSparse/README.md
+lib/R/library/Matrix/doc/SuiteSparse/SuiteSparse_config/README.txt
 lib/R/library/Matrix/doc/index.html
 lib/R/library/Matrix/doc/sparseModels.R
 lib/R/library/Matrix/doc/sparseModels.Rnw
@@ -363,6 +385,20 @@ lib/R/library/Matrix/po/lt/LC_MESSAGES/M
 lib/R/library/Matrix/po/lt/LC_MESSAGES/R-Matrix.mo
 lib/R/library/Matrix/po/pl/LC_MESSAGES/Matrix.mo
 lib/R/library/Matrix/po/pl/LC_MESSAGES/R-Matrix.mo
+lib/R/library/Matrix/scripts/AMD.patch
+lib/R/library/Matrix/scripts/CAMD.patch
+lib/R/library/Matrix/scripts/CCOLAMD.patch
+lib/R/library/Matrix/scripts/CHOLMOD.patch
+lib/R/library/Matrix/scripts/COLAMD.patch
+lib/R/library/Matrix/scripts/CXSparse.patch
+lib/R/library/Matrix/scripts/SuiteSparse_config.patch
+lib/R/library/Matrix/scripts/api.patch
+lib/R/library/Matrix/scripts/disclaimer.txt
+lib/R/library/Matrix/scripts/rules.mk
+lib/R/library/Matrix/scripts/rules.sh
+lib/R/library/Matrix/scripts/sources.mk
+lib/R/library/Matrix/scripts/ssget.sh
+lib/R/library/Matrix/scripts/wall.patch
 lib/R/library/Matrix/test-tools-1.R
 lib/R/library/Matrix/test-tools-Matrix.R
 lib/R/library/Matrix/test-tools.R
@@ -615,8 +651,24 @@ lib/R/library/grDevices/afm/Helvetica-Bo
 lib/R/library/grDevices/afm/Helvetica-BoldOblique.afm.gz
 lib/R/library/grDevices/afm/Helvetica-Oblique.afm.gz
 lib/R/library/grDevices/afm/Helvetica.afm.gz
+lib/R/library/grDevices/afm/LICENSE.LPPL
 lib/R/library/grDevices/afm/MustRead.html
+lib/R/library/grDevices/afm/NimbusMonoPS-Bold.afm.gz
+lib/R/library/grDevices/afm/NimbusMonoPS-BoldItalic.afm.gz
+lib/R/library/grDevices/afm/NimbusMonoPS-Italic.afm.gz
+lib/R/library/grDevices/afm/NimbusMonoPS-Regular.afm.gz
+lib/R/library/grDevices/afm/NimbusRoman-Bold.afm.gz
+lib/R/library/grDevices/afm/NimbusRoman-BoldItalic.afm.gz
+lib/R/library/grDevices/afm/NimbusRoman-Italic.afm.gz
+lib/R/library/grDevices/afm/NimbusRoman-Regular.afm.gz
+lib/R/library/grDevices/afm/NimbusSans-Bold.afm.gz
+lib/R/library/grDevices/afm/NimbusSans-BoldItalic.afm.gz
+lib/R/library/grDevices/afm/NimbusSans-BoldOblique.afm.gz
+lib/R/library/grDevices/afm/NimbusSans-Italic.afm.gz
+lib/R/library/grDevices/afm/NimbusSans-Oblique.afm.gz
+lib/R/library/grDevices/afm/NimbusSans-Regular.afm.gz
 lib/R/library/grDevices/afm/README
+lib/R/library/grDevices/afm/StandardSymbolsPS.afm.gz
 lib/R/library/grDevices/afm/Symbol.afm.gz
 lib/R/library/grDevices/afm/Times-Bold.afm.gz
 lib/R/library/grDevices/afm/Times-BoldItalic.afm.gz
@@ -707,7 +759,6 @@ lib/R/library/grDevices/enc/ISOLatin7.en
 lib/R/library/grDevices/enc/ISOLatin9.enc
 lib/R/library/grDevices/enc/KOI8-R.enc
 lib/R/library/grDevices/enc/KOI8-U.enc
-lib/R/library/grDevices/enc/MacRoman.enc
 lib/R/library/grDevices/enc/PDFDoc.enc
 lib/R/library/grDevices/enc/TeXtext.enc
 lib/R/library/grDevices/enc/WinAnsi.enc
@@ -724,7 +775,6 @@ lib/R/library/grDevices/html/00Index.htm
 lib/R/library/grDevices/html/R.css
 lib/R/library/grDevices/icc/srgb
 lib/R/library/grDevices/icc/srgb.flate
-lib/R/library/grDevices/libs/cairo.so
 lib/R/library/grDevices/libs/grDevices.so
 lib/R/library/graphics/DESCRIPTION
 lib/R/library/graphics/INDEX
@@ -1285,6 +1335,54 @@ lib/R/library/tools/html/00Index.html
 lib/R/library/tools/html/R.css
 lib/R/library/tools/libs/tools.so
 lib/R/library/translations/DESCRIPTION
+lib/R/library/translations/ar/LC_MESSAGES/R-base.mo
+lib/R/library/translations/ar/LC_MESSAGES/R-methods.mo
+lib/R/library/translations/ar/LC_MESSAGES/R-parallel.mo
+lib/R/library/translations/ar/LC_MESSAGES/R-splines.mo
+lib/R/library/translations/ar/LC_MESSAGES/R-stats.mo
+lib/R/library/translations/ar/LC_MESSAGES/R-stats4.mo
+lib/R/library/translations/ar/LC_MESSAGES/R-tcltk.mo
+lib/R/library/translations/ar/LC_MESSAGES/R-tools.mo
+lib/R/library/translations/ar/LC_MESSAGES/R-utils.mo
+lib/R/library/translations/ar/LC_MESSAGES/R.mo
+lib/R/library/translations/ar/LC_MESSAGES/RGui.mo
+lib/R/library/translations/ar/LC_MESSAGES/grDevices.mo
+lib/R/library/translations/ar/LC_MESSAGES/graphics.mo
+lib/R/library/translations/ar/LC_MESSAGES/methods.mo
+lib/R/library/translations/ar/LC_MESSAGES/parallel.mo
+lib/R/library/translations/ar/LC_MESSAGES/splines.mo
+lib/R/library/translations/ar/LC_MESSAGES/stats.mo
+lib/R/library/translations/ar/LC_MESSAGES/tcltk.mo
+lib/R/library/translations/ar/LC_MESSAGES/tools.mo
+lib/R/library/translations/ar/LC_MESSAGES/utils.mo
+lib/R/library/translations/bn/LC_MESSAGES/R-base.mo
+lib/R/library/translations/bn/LC_MESSAGES/RGui.mo
+lib/R/library/translations/bn/LC_MESSAGES/tcltk.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-base.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-compiler.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-grDevices.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-graphics.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-grid.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-methods.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-parallel.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-splines.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-stats.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-stats4.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-tcltk.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-tools.mo
+lib/R/library/translations/ca/LC_MESSAGES/R-utils.mo
+lib/R/library/translations/ca/LC_MESSAGES/R.mo
+lib/R/library/translations/ca/LC_MESSAGES/RGui.mo
+lib/R/library/translations/ca/LC_MESSAGES/grDevices.mo
+lib/R/library/translations/ca/LC_MESSAGES/graphics.mo
+lib/R/library/translations/ca/LC_MESSAGES/grid.mo
+lib/R/library/translations/ca/LC_MESSAGES/methods.mo
+lib/R/library/translations/ca/LC_MESSAGES/parallel.mo
+lib/R/library/translations/ca/LC_MESSAGES/splines.mo
+lib/R/library/translations/ca/LC_MESSAGES/stats.mo
+lib/R/library/translations/ca/LC_MESSAGES/tcltk.mo
+lib/R/library/translations/ca/LC_MESSAGES/tools.mo
+lib/R/library/translations/ca/LC_MESSAGES/utils.mo
 lib/R/library/translations/da/LC_MESSAGES/R-base.mo
 lib/R/library/translations/da/LC_MESSAGES/R-compiler.mo
 lib/R/library/translations/da/LC_MESSAGES/R-grDevices.mo
@@ -1359,12 +1457,50 @@ lib/R/library/translations/en@quot/LC_ME
 lib/R/library/translations/en@quot/LC_MESSAGES/tcltk.mo
 lib/R/library/translations/en@quot/LC_MESSAGES/tools.mo
 lib/R/library/translations/en@quot/LC_MESSAGES/utils.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-base.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-compiler.mo
 lib/R/library/translations/en_GB/LC_MESSAGES/R-grDevices.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-graphics.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-grid.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-methods.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-parallel.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-splines.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-stats.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-stats4.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-tcltk.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-tools.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/R-utils.mo
 lib/R/library/translations/en_GB/LC_MESSAGES/R.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/RGui.mo
 lib/R/library/translations/en_GB/LC_MESSAGES/grDevices.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/graphics.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/grid.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/methods.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/parallel.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/splines.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/stats.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/tcltk.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/tools.mo
+lib/R/library/translations/en_GB/LC_MESSAGES/utils.mo
+lib/R/library/translations/es/LC_MESSAGES/R-base.mo
+lib/R/library/translations/es/LC_MESSAGES/R-grDevices.mo
+lib/R/library/translations/es/LC_MESSAGES/R-graphics.mo
+lib/R/library/translations/es/LC_MESSAGES/R-grid.mo
+lib/R/library/translations/es/LC_MESSAGES/R-methods.mo
+lib/R/library/translations/es/LC_MESSAGES/R-parallel.mo
+lib/R/library/translations/es/LC_MESSAGES/R-stats.mo
+lib/R/library/translations/es/LC_MESSAGES/R-stats4.mo
+lib/R/library/translations/es/LC_MESSAGES/R-tools.mo
+lib/R/library/translations/es/LC_MESSAGES/R-utils.mo
 lib/R/library/translations/es/LC_MESSAGES/R.mo
 lib/R/library/translations/es/LC_MESSAGES/RGui.mo
+lib/R/library/translations/es/LC_MESSAGES/grDevices.mo
 lib/R/library/translations/es/LC_MESSAGES/graphics.mo
+lib/R/library/translations/es/LC_MESSAGES/parallel.mo
+lib/R/library/translations/es/LC_MESSAGES/stats.mo
+lib/R/library/translations/es/LC_MESSAGES/tcltk.mo
+lib/R/library/translations/es/LC_MESSAGES/tools.mo
+lib/R/library/translations/es/LC_MESSAGES/utils.mo
 lib/R/library/translations/fa/LC_MESSAGES/R-base.mo
 lib/R/library/translations/fa/LC_MESSAGES/R-utils.mo
 lib/R/library/translations/fa/LC_MESSAGES/R.mo
@@ -1394,6 +1530,40 @@ lib/R/library/translations/fr/LC_MESSAGE
 lib/R/library/translations/fr/LC_MESSAGES/tcltk.mo
 lib/R/library/translations/fr/LC_MESSAGES/tools.mo
 lib/R/library/translations/fr/LC_MESSAGES/utils.mo
+lib/R/library/translations/hi/LC_MESSAGES/R-base.mo
+lib/R/library/translations/hi/LC_MESSAGES/R-grDevices.mo
+lib/R/library/translations/hi/LC_MESSAGES/R-graphics.mo
+lib/R/library/translations/hi/LC_MESSAGES/R-parallel.mo
+lib/R/library/translations/hi/LC_MESSAGES/R-stats.mo
+lib/R/library/translations/hi/LC_MESSAGES/R-tools.mo
+lib/R/library/translations/hi/LC_MESSAGES/R-utils.mo
+lib/R/library/translations/hi/LC_MESSAGES/R.mo
+lib/R/library/translations/hi/LC_MESSAGES/RGui.mo
+lib/R/library/translations/hi/LC_MESSAGES/grDevices.mo
+lib/R/library/translations/hi/LC_MESSAGES/graphics.mo
+lib/R/library/translations/hi/LC_MESSAGES/parallel.mo
+lib/R/library/translations/hi/LC_MESSAGES/stats.mo
+lib/R/library/translations/hi/LC_MESSAGES/tools.mo
+lib/R/library/translations/hi/LC_MESSAGES/utils.mo
+lib/R/library/translations/hu/LC_MESSAGES/R-base.mo
+lib/R/library/translations/hu/LC_MESSAGES/R-graphics.mo
+lib/R/library/translations/hu/LC_MESSAGES/R-parallel.mo
+lib/R/library/translations/hu/LC_MESSAGES/R-splines.mo
+lib/R/library/translations/hu/LC_MESSAGES/R-stats.mo
+lib/R/library/translations/hu/LC_MESSAGES/R-tcltk.mo
+lib/R/library/translations/hu/LC_MESSAGES/R-tools.mo
+lib/R/library/translations/hu/LC_MESSAGES/R-utils.mo
+lib/R/library/translations/hu/LC_MESSAGES/R.mo
+lib/R/library/translations/hu/LC_MESSAGES/RGui.mo
+lib/R/library/translations/hu/LC_MESSAGES/grDevices.mo
+lib/R/library/translations/hu/LC_MESSAGES/graphics.mo
+lib/R/library/translations/hu/LC_MESSAGES/grid.mo
+lib/R/library/translations/hu/LC_MESSAGES/parallel.mo
+lib/R/library/translations/hu/LC_MESSAGES/stats.mo
+lib/R/library/translations/hu/LC_MESSAGES/tcltk.mo
+lib/R/library/translations/hu/LC_MESSAGES/tools.mo
+lib/R/library/translations/hu/LC_MESSAGES/utils.mo
+lib/R/library/translations/id/LC_MESSAGES/R-base.mo
 lib/R/library/translations/it/LC_MESSAGES/R-base.mo
 lib/R/library/translations/it/LC_MESSAGES/R-compiler.mo
 lib/R/library/translations/it/LC_MESSAGES/R-grDevices.mo
@@ -1425,6 +1595,7 @@ lib/R/library/translations/ja/LC_MESSAGE
 lib/R/library/translations/ja/LC_MESSAGES/R-graphics.mo
 lib/R/library/translations/ja/LC_MESSAGES/R-grid.mo
 lib/R/library/translations/ja/LC_MESSAGES/R-methods.mo
+lib/R/library/translations/ja/LC_MESSAGES/R-parallel.mo
 lib/R/library/translations/ja/LC_MESSAGES/R-splines.mo
 lib/R/library/translations/ja/LC_MESSAGES/R-stats.mo
 lib/R/library/translations/ja/LC_MESSAGES/R-stats4.mo
@@ -1437,6 +1608,7 @@ lib/R/library/translations/ja/LC_MESSAGE
 lib/R/library/translations/ja/LC_MESSAGES/graphics.mo
 lib/R/library/translations/ja/LC_MESSAGES/grid.mo
 lib/R/library/translations/ja/LC_MESSAGES/methods.mo
+lib/R/library/translations/ja/LC_MESSAGES/parallel.mo
 lib/R/library/translations/ja/LC_MESSAGES/splines.mo
 lib/R/library/translations/ja/LC_MESSAGES/stats.mo
 lib/R/library/translations/ja/LC_MESSAGES/tcltk.mo
@@ -1491,6 +1663,9 @@ lib/R/library/translations/lt/LC_MESSAGE
 lib/R/library/translations/lt/LC_MESSAGES/tcltk.mo
 lib/R/library/translations/lt/LC_MESSAGES/tools.mo
 lib/R/library/translations/lt/LC_MESSAGES/utils.mo
+lib/R/library/translations/ne/LC_MESSAGES/R-compiler.mo
+lib/R/library/translations/ne/LC_MESSAGES/R.mo
+lib/R/library/translations/ne/LC_MESSAGES/RGui.mo
 lib/R/library/translations/nn/LC_MESSAGES/R-base.mo
 lib/R/library/translations/nn/LC_MESSAGES/R.mo
 lib/R/library/translations/nn/LC_MESSAGES/RGui.mo
@@ -1526,6 +1701,7 @@ lib/R/library/translations/pt_BR/LC_MESS
 lib/R/library/translations/pt_BR/LC_MESSAGES/R-graphics.mo
 lib/R/library/translations/pt_BR/LC_MESSAGES/R-grid.mo
 lib/R/library/translations/pt_BR/LC_MESSAGES/R-methods.mo
+lib/R/library/translations/pt_BR/LC_MESSAGES/R-parallel.mo
 lib/R/library/translations/pt_BR/LC_MESSAGES/R-splines.mo
 lib/R/library/translations/pt_BR/LC_MESSAGES/R-stats.mo
 lib/R/library/translations/pt_BR/LC_MESSAGES/R-stats4.mo
@@ -1542,6 +1718,7 @@ lib/R/library/translations/pt_BR/LC_MESS
 lib/R/library/translations/pt_BR/LC_MESSAGES/stats.mo
 lib/R/library/translations/pt_BR/LC_MESSAGES/tcltk.mo
 lib/R/library/translations/pt_BR/LC_MESSAGES/tools.mo
+lib/R/library/translations/pt_BR/LC_MESSAGES/utils.mo
 lib/R/library/translations/ru/LC_MESSAGES/R-base.mo
 lib/R/library/translations/ru/LC_MESSAGES/R-compiler.mo
 lib/R/library/translations/ru/LC_MESSAGES/R-grDevices.mo
@@ -1567,6 +1744,8 @@ lib/R/library/translations/ru/LC_MESSAGE
 lib/R/library/translations/ru/LC_MESSAGES/tcltk.mo
 lib/R/library/translations/ru/LC_MESSAGES/tools.mo
 lib/R/library/translations/ru/LC_MESSAGES/utils.mo
+lib/R/library/translations/sq/LC_MESSAGES/R-base.mo
+lib/R/library/translations/sq/LC_MESSAGES/R.mo
 lib/R/library/translations/tr/LC_MESSAGES/R-base.mo
 lib/R/library/translations/tr/LC_MESSAGES/R-stats.mo
 lib/R/library/translations/tr/LC_MESSAGES/R-stats4.mo
@@ -1575,6 +1754,7 @@ lib/R/library/translations/tr/LC_MESSAGE
 lib/R/library/translations/tr/LC_MESSAGES/R.mo
 lib/R/library/translations/tr/LC_MESSAGES/RGui.mo
 lib/R/library/translations/tr/LC_MESSAGES/graphics.mo
+lib/R/library/translations/ur/LC_MESSAGES/R-base.mo
 lib/R/library/translations/zh_CN/LC_MESSAGES/R-base.mo
 lib/R/library/translations/zh_CN/LC_MESSAGES/R-compiler.mo
 lib/R/library/translations/zh_CN/LC_MESSAGES/R-grDevices.mo
@@ -1662,6 +1842,9 @@ lib/R/share/R/examples-header.R
 lib/R/share/R/nspackloader.R
 lib/R/share/R/tests-startup.R
 lib/R/share/Rd/macros/system.Rd
+lib/R/share/dictionaries/R_Rd_files.rds
+lib/R/share/dictionaries/R_manuals.rds
+lib/R/share/dictionaries/R_vignettes.rds
 lib/R/share/dictionaries/en_stats.rds
 lib/R/share/encodings/Adobe-glyphlist
 lib/R/share/encodings/character-sets

Index: pkgsrc/math/R/distinfo
diff -u pkgsrc/math/R/distinfo:1.105 pkgsrc/math/R/distinfo:1.106
--- pkgsrc/math/R/distinfo:1.105        Sun Apr 28 14:26:43 2024
+++ pkgsrc/math/R/distinfo      Mon May 27 20:45:14 2024
@@ -1,10 +1,10 @@
-$NetBSD: distinfo,v 1.105 2024/04/28 14:26:43 mef Exp $
+$NetBSD: distinfo,v 1.106 2024/05/27 20:45:14 mef Exp $
 
-BLAKE2s (R-4.3.3.tar.gz) = 59e9ead4142a600fdb24f91f957aa89dee798284410d4b6fa17c77cb1eacacd4
-SHA512 (R-4.3.3.tar.gz) = 26291590d935ea5678771cdcaea013a6c030897eb762b0204e42b34b0f1d33aac1ec933f36caa18d2a31a057a4456bf629222e4f5679f24bc48a7a764b1aedbe
-Size (R-4.3.3.tar.gz) = 35861202 bytes
-SHA1 (patch-configure.ac) = 3cd063c424b7b9674f434d49c771b76dde73ac5c
-SHA1 (patch-m4_R.m4) = 48a1d38b5505cbb87bd2c156f262680156c07a02
+BLAKE2s (R-4.4.0.tar.gz) = 31efebb6f183d6e754b82dfb14b4715659a01d5ee95b86048d6127f884d42d6a
+SHA512 (R-4.4.0.tar.gz) = 8f44eac49c58db7f161732135be4d1757f65b18545f3f15c463d499794735d02f4a4cb9bacff90d16e80b624ead8aa0af16899cf7654b6cb91a46868e405bd17
+Size (R-4.4.0.tar.gz) = 37335563 bytes
+SHA1 (patch-configure.ac) = 91bed37afc2ee2f68695f8496c56ae23aaf42b43
+SHA1 (patch-m4_R.m4) = 3e1d390d8aa9895aee7cb479ddab371d82562b88
 SHA1 (patch-src_include_R__ext_Error.h) = bc55a8bba6bf931e3f6794577e63bfafdfc740cf
 SHA1 (patch-src_library_stats_src_Makefile.in) = 4eb93292858392792c37a706399e2cef91821bbe
 SHA1 (patch-src_main_character.c) = c1be2cae404ecbdd547343b70e9d072e9e1d5549

Index: pkgsrc/math/R/patches/patch-configure.ac
diff -u pkgsrc/math/R/patches/patch-configure.ac:1.8 pkgsrc/math/R/patches/patch-configure.ac:1.9
--- pkgsrc/math/R/patches/patch-configure.ac:1.8        Mon Jan  8 23:13:03 2024
+++ pkgsrc/math/R/patches/patch-configure.ac    Mon May 27 20:45:14 2024
@@ -1,10 +1,10 @@
-$NetBSD: patch-configure.ac,v 1.8 2024/01/08 23:13:03 mef Exp $
+$NetBSD: patch-configure.ac,v 1.9 2024/05/27 20:45:14 mef Exp $
 
 Do not include system paths in R_LD_LIBRARY_PATH.
 NetBSD, FreeBSD, DragonFly, Darwin and Solaris fixes
 
---- configure.ac.orig  2019-06-08 08:57:35.738653089 +0000
-+++ configure.ac
+--- configure.ac.orig  2024-03-27 08:02:03.000000000 +0900
++++ configure.ac       2024-04-29 00:00:51.788804133 +0900
 @@ -33,6 +33,7 @@ m4_define([R_VERSION],
  AC_INIT([R],[R_VERSION],[https://bugs.r-project.org],[R],[https://www.r-project.org])
  AC_CONFIG_SRCDIR([src/include/Defn.h])
@@ -13,16 +13,25 @@ NetBSD, FreeBSD, DragonFly, Darwin and S
  
  ### * Information on the package.
  
-@@ -290,7 +291,7 @@ AC_ARG_ENABLE([BLAS-shlib],
+@@ -136,7 +137,7 @@ R_CONFIG_ARGS="${ac_configure_args}"
+ AC_SUBST(R_CONFIG_ARGS)
+ 
+ ## Shortcut for musl which refuses to identify itself at C level
+-if test "${host_os}" == "linux-musl"; then
++if test "${host_os}" = "linux-musl"; then
+   AC_DEFINE(OS_MUSL, 1, [Define if running on Linux-musl])
+ fi
+ 
+@@ -316,7 +317,7 @@ AC_ARG_ENABLE([BLAS-shlib],
  
  ## As from R 3.2.0 split up -L... and -lR
  if test "${want_R_shlib}" = yes; then
 -  LIBR0="-L\"\$(R_HOME)/lib\$(R_ARCH)\""
-+  LIBR0="@COMPILER_RPATH_FLAG@${prefix}/lib/R/lib\$(R_ARCH) -L\"\$(R_HOME)/lib\$(R_ARCH)\""
++  LIBR0="-Wl,-R${prefix}/lib/R/lib\$(R_ARCH) -L\"\$(R_HOME)/lib\$(R_ARCH)\""
    LIBR1=-lR
  else
    LIBR0=
-@@ -709,7 +710,7 @@ case "${host_os}" in
+@@ -898,7 +899,7 @@ case "${host_os}" in
      ## Not so bad in later versions of Darwin, 
      ## where DYLD_FALLBACK_LIBRARY_PATH is used (see below).
      ;;
@@ -31,7 +40,7 @@ NetBSD, FreeBSD, DragonFly, Darwin and S
      for arg in ${LDFLAGS}; do
        case "${arg}" in
          -L*)
-@@ -1276,7 +1277,7 @@ rm -f libconftest${DYLIB_EXT} conftest.c
+@@ -1549,7 +1550,7 @@ rm -f libconftest${DYLIB_EXT} conftest.c
      fpicflags="${darwin_pic}"
      shlib_cxxldflags="${shlib_ldflags}"
      ;;
@@ -40,7 +49,7 @@ NetBSD, FreeBSD, DragonFly, Darwin and S
      ## maybe this needs to depend on the compiler:
      ## -export-dynamic used to work, but does not with clang.
      ## Seems FreeBSD has used the GNU linker since at least 3.0 (Oct 1998)
-@@ -1365,6 +1366,12 @@ dnl     ;;
+@@ -1638,6 +1639,12 @@ dnl     ;;
      ;;
    netbsd*)
      ## See the comments about FreeBSD
@@ -53,7 +62,7 @@ NetBSD, FreeBSD, DragonFly, Darwin and S
      if ${CPP} - -dM < /dev/null | grep __ELF__ >/dev/null ; then
        main_ldflags="-Wl,--export-dynamic"
        shlib_ldflags="-shared"
-@@ -1401,22 +1408,22 @@ dnl     ;;
+@@ -1674,22 +1681,22 @@ dnl     ;;
    solaris*)
  ## SPARC has only an 8k global object table, 1024 entries on 64-bit,
  ## so need PIC not pic.  They are the same on other Solaris platforms.
@@ -80,7 +89,7 @@ NetBSD, FreeBSD, DragonFly, Darwin and S
        cpicflags="-KPIC"
        if test "`basename ${CXX}`" = "CC" ; then
          ## Forte version 7 needs -lCstd: Forte 6 does not.    
-@@ -1495,7 +1502,7 @@ fi
+@@ -1768,7 +1775,7 @@ fi
  : ${CXXPICFLAGS="${cxxpicflags}"}
  if test -n "${CXX}" -a -z "${CXXPICFLAGS}"; then
    case "${host_os}" in
@@ -89,7 +98,7 @@ NetBSD, FreeBSD, DragonFly, Darwin and S
        ;;
      *)
        warn_cxxpicflags="I could not determine CXXPICFLAGS."
-@@ -1555,8 +1562,10 @@ dnl     ;;
+@@ -1828,8 +1835,10 @@ dnl     ;;
      MAJR_VERSION=`echo "${PACKAGE_VERSION}" | sed  -e "s/[[\.]][[1-9]]$/.0/"` 
      LIBR_LDFLAGS="-install_name libR.dylib -compatibility_version ${MAJR_VERSION}  -current_version ${PACKAGE_VERSION}  -headerpad_max_install_names"
      RLAPACK_LDFLAGS="-install_name libRlapack.dylib -compatibility_version ${MAJR_VERSION} -current_version ${PACKAGE_VERSION}  -headerpad_max_install_names"
@@ -101,7 +110,7 @@ NetBSD, FreeBSD, DragonFly, Darwin and S
      ;;
  dnl   hpux*)
  dnl     ## Needs to avoid embedding a relative path ../../../bin.
-@@ -2482,7 +2491,7 @@ case "${host_os}" in
+@@ -2825,7 +2834,7 @@ case "${host_os}" in
      r_ld_library_defaults="/usr/lib64:/lib64:/usr/lib:/lib"
      ;;
    solaris*)
@@ -110,3 +119,15 @@ NetBSD, FreeBSD, DragonFly, Darwin and S
      ;;
    *)
      r_ld_library_defaults=
+@@ -2995,9 +3004,9 @@ sdk_OK=no)
+ dnl No longer used as we only build (or not) BLAS and LAPACK shims
+ dnl  AC_DEFINE(USE_NEW_ACCELERATE, 1, [Define to use Apple's (new) Accelerate])
+ fi
+-AM_CONDITIONAL(BUILD_NEW_ACCELERATE, [test "x${use_accelerate}" == xyes])
++AM_CONDITIONAL(BUILD_NEW_ACCELERATE, [test "x${use_accelerate}" = xyes])
+ AM_CONDITIONAL(BUILD_NEW_ACCELERATE_LAPACK,
+-              [test "x${use_accelerate_lapack}" == xyes])
++              [test "x${use_accelerate_lapack}" = xyes])
+ 
+ dnl record compiler versions
+ CC_VER=`${CC} --version | ${SED} -n 1p`

Index: pkgsrc/math/R/patches/patch-m4_R.m4
diff -u pkgsrc/math/R/patches/patch-m4_R.m4:1.5 pkgsrc/math/R/patches/patch-m4_R.m4:1.6
--- pkgsrc/math/R/patches/patch-m4_R.m4:1.5     Mon Jan  8 23:15:39 2024
+++ pkgsrc/math/R/patches/patch-m4_R.m4 Mon May 27 20:45:14 2024
@@ -1,39 +1,36 @@
-$NetBSD: patch-m4_R.m4,v 1.5 2024/01/08 23:15:39 mef Exp $
+$NetBSD: patch-m4_R.m4,v 1.6 2024/05/27 20:45:14 mef Exp $
 
 Ensure tests for clog & co. fail, not just emit warning
 
---- m4/R.m4.orig       2023-07-30 07:15:01.000000000 +0900
-+++ m4/R.m4    2024-01-09 08:02:14.228733733 +0900
-@@ -226,7 +226,7 @@ if test -z "${texi2any_version_maj}" \
- elif test ${texi2any_version_maj} -gt 5; then
-   r_cv_prog_texi2any_v5=yes
- elif test ${texi2any_version_maj} -lt 5 \
--     || test ${texi2any_version_min} -lt 1; then
-+     || test ${texi2any_version_maj} = 5 -a ${texi2any_version_min} -lt 1; then
-   r_cv_prog_texi2any_v5=no
- else
-   r_cv_prog_texi2any_v5=yes
-@@ -905,6 +905,9 @@ dnl Yes we need to double quote this ...
+--- m4/R.m4.orig       2024-04-05 07:15:01.000000000 +0900
++++ m4/R.m4    2024-04-28 23:55:22.817246115 +0900
+@@ -1,4 +1,4 @@
+-### R.m4 -- extra macros for configuring R            -*- Autoconf -*-
++:### R.m4 -- extra macros for configuring R           -*- Autoconf -*-
+ ###
+ ### Copyright (C) 1998-2024 R Core Team
+ ###
+@@ -927,6 +927,9 @@ dnl Yes we need to double quote this ...
  
  extern void F77_SYMBOL(cftest)(int *a, int *b, double *x, double *y);
  
 +int MAIN_ () { return 0; }
 +int MAIN__ () { return 0; }
 +
- int main () {
+ int main (void) {
    int a[3] = {17, 237, 2000000000}, b[2], res = 0;
    double x[3] = {3.14159265, 123.456789, 2.3e34}, z[3];
-@@ -1000,6 +1003,9 @@ typedef union {
+@@ -1022,6 +1025,9 @@ typedef union {
  
  extern void F77_SYMBOL(cftest)(Rcomplex *x);
  
 +int MAIN_ () { return 0; }
 +int MAIN__ () { return 0; }
 +
- int main () {
+ int main (void) {
      Rcomplex z[3];
  
-@@ -3858,9 +3864,9 @@ R_CHECK_FUNCS([cabs carg cexp clog csqrt
+@@ -4081,9 +4087,9 @@ R_CHECK_FUNCS([cabs carg cexp clog csqrt
  AC_DEFUN([R_CHECK_DECL],
  [AS_VAR_PUSHDEF([ac_Symbol], [ac_cv_have_decl_$1])dnl
  AC_CACHE_CHECK([whether $1 exists and is declared], ac_Symbol,
@@ -46,7 +43,7 @@ Ensure tests for clog & co. fail, not ju
  #endif
  ])],
                     [AS_VAR_SET(ac_Symbol, yes)],
-@@ -4682,9 +4688,9 @@ AC_CACHE_CHECK([if libcurl is >= 7.28.0]
+@@ -4905,9 +4911,9 @@ AC_CACHE_CHECK([if libcurl is >= 7.28.0]
  int main(void) 
  {
  #ifdef LIBCURL_VERSION_MAJOR