CVS commit: pkgsrc/biology/canu

["Jason Bacon" <bacon%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   bacon
Date:           Fri Feb 23 14:30:59 UTC 2024

Modified Files:
        pkgsrc/biology/canu: Makefile

Log Message:
biology/canu: Update to 2.2nb3

Remove gnuplot dependency.  It isn't necessary for basic canu
functionality, and it pulls in a rust dependency, which causes
frequent breakage.


To generate a diff of this commit:
cvs rdiff -u -r1.24 -r1.25 pkgsrc/biology/canu/Makefile

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/canu/Makefile
diff -u pkgsrc/biology/canu/Makefile:1.24 pkgsrc/biology/canu/Makefile:1.25
--- pkgsrc/biology/canu/Makefile:1.24   Fri Dec 29 18:24:35 2023
+++ pkgsrc/biology/canu/Makefile        Fri Feb 23 14:30:58 2024
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.24 2023/12/29 18:24:35 adam Exp $
+# $NetBSD: Makefile,v 1.25 2024/02/23 14:30:58 bacon Exp $
 
 DISTNAME=      canu-2.2
-PKGREVISION=   2
+PKGREVISION=   3
 CATEGORIES=    biology java
 MASTER_SITES=  ${MASTER_SITE_GITHUB:=marbl/}
 EXTRACT_SUFX=  .tar.xz
@@ -12,8 +12,6 @@ HOMEPAGE=     https://canu.readthedocs.io/
 COMMENT=       Single molecule sequence assembler for genomes large and small
 LICENSE=       gnu-gpl-v2
 
-DEPENDS+=      gnuplot>0:../../graphics/gnuplot
-
 SUBST_CLASSES+=                perl
 SUBST_STAGE.perl=      pre-configure
 SUBST_SED.perl+=       -e 's|$$FindBin::RealBin/../lib/site_perl|${PREFIX}/${SITE_PERL_REL}|g'