CVS commit: pkgsrc/biology/fastx-toolkit

["Jason Bacon" <bacon%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   bacon
Date:           Mon Sep 25 18:01:35 UTC 2023

Modified Files:
        pkgsrc/biology/fastx-toolkit: distinfo
Added Files:
        pkgsrc/biology/fastx-toolkit/patches: patch-configure.ac

Log Message:
biology/fastx-toolkit: Unbreak build on Darwin

Remove hard-coded -Werror from configure.ac


To generate a diff of this commit:
cvs rdiff -u -r1.1 -r1.2 pkgsrc/biology/fastx-toolkit/distinfo
cvs rdiff -u -r0 -r1.1 \
    pkgsrc/biology/fastx-toolkit/patches/patch-configure.ac

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/fastx-toolkit/distinfo
diff -u pkgsrc/biology/fastx-toolkit/distinfo:1.1 pkgsrc/biology/fastx-toolkit/distinfo:1.2
--- pkgsrc/biology/fastx-toolkit/distinfo:1.1   Tue Apr  5 18:48:57 2022
+++ pkgsrc/biology/fastx-toolkit/distinfo       Mon Sep 25 18:01:35 2023
@@ -1,8 +1,9 @@
-$NetBSD: distinfo,v 1.1 2022/04/05 18:48:57 bacon Exp $
+$NetBSD: distinfo,v 1.2 2023/09/25 18:01:35 bacon Exp $
 
 BLAKE2s (fastx-toolkit-0.0.14.6-ea0ca83ba24dce80c20ca589b838a281fe5deb0c.tar.gz) = 973b56d722a2796aa28a04de56ef9273ce5a99fae5cf40bdbf9ef796acb2b6ef
 SHA512 (fastx-toolkit-0.0.14.6-ea0ca83ba24dce80c20ca589b838a281fe5deb0c.tar.gz) = 
bb9cc9685a37e0a88b5110ad48856d4160dc1a29e6b76f8cdf78baf12a9cea97c35f711b1aef270bba5d44b42c8e6bcc31ef9eae239de785fe1bd38cd4994d3e
 Size (fastx-toolkit-0.0.14.6-ea0ca83ba24dce80c20ca589b838a281fe5deb0c.tar.gz) = 259875 bytes
+SHA1 (patch-configure.ac) = 3904fa9c2d399b8973a3d8f29696e4404ce15d3e
 SHA1 (patch-m4_Makefile.am) = f8cb138860f0a3708a6690ea6cd33302b35bce76
 SHA1 (patch-src_fasta__formatter_fasta__formatter.cpp) = 5fc622320186c5415cbcc4ae97cfc24f68983949
 SHA1 (patch-src_libfastx_fastx.h) = 5a387ac575a5269bc03e3f09ab752889efb8870c

Added files:

Index: pkgsrc/biology/fastx-toolkit/patches/patch-configure.ac
diff -u /dev/null pkgsrc/biology/fastx-toolkit/patches/patch-configure.ac:1.1
--- /dev/null   Mon Sep 25 18:01:35 2023
+++ pkgsrc/biology/fastx-toolkit/patches/patch-configure.ac     Mon Sep 25 18:01:35 2023
@@ -0,0 +1,15 @@
+$NetBSD: patch-configure.ac,v 1.1 2023/09/25 18:01:35 bacon Exp $
+
+# Prevent build failures over minor warnings
+
+--- configure.ac.orig  2023-09-25 17:54:20.467556701 +0000
++++ configure.ac
+@@ -31,7 +31,7 @@ dnl fi
+ PKG_CHECK_MODULES([GTEXTUTILS],[gtextutils])
+ 
+ dnl --enable-wall
+-EXTRA_CHECKS="-Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal -Werror"
++EXTRA_CHECKS="-Wall -Wextra -Wformat-nonliteral -Wformat-security -Wswitch-default -Wswitch-enum -Wunused-parameter -Wfloat-equal"
+ AC_ARG_ENABLE(wall,
+ [  --enable-wall          Enable many common GCC warnings (-Wall,-Wextra, -Werror etc., default enabled)],
+ [case "${enableval}" in