CVS commit: pkgsrc/math/R-mvtnorm

["Makoto Fujiwara" <mef%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   mef
Date:           Sun Jun 11 03:47:33 UTC 2023

Modified Files:
        pkgsrc/math/R-mvtnorm: Makefile distinfo

Log Message:
(math/R-mvtnorm) Updated 1.3.1 to 1.2.2

Changes in Version 1.2-2 (2023-06-05):

  Bugfixes:
         * Fix overflow problem reported by ASAN.

  Documentation:
         * Be even more careful inverting / computing Cholesky factors
           for hessians (M1 and macos-arm64).

Changes in Version 1.2-1 (2023-06-02):

  Bugfixes:
         * Avoid attempts to allocate zero length arrays for
           one-dimensional problems.

  Documentation:
         * Catch M1mac problems with inverting hessians.

Changes in Version 1.2-0 (2023-06-02):

        * New 'lpmvnorm' function for computing multivariate normal
          log-likelihoods for interval-censored observations.

        * New 'slpmvnorm' function for computing the corresponding
          score function for interval-censored observations.

        * New 'ldmvnorm' function for computing multivariate normal
          log-likelihoods for exact observations.

        * New 'sldmvnorm' function for computing the corresponding
          score function for exact observations.

        * New 'ldpmvnorm' function for computing multivariate normal
          log-likelihoods for a mix of exact and interval-censored
          observations.

        * New 'sldpmvnorm' function for computing the corresponding
          score function for a mix of exact and interval-censored
          observations.

        * New class 'ltMatrices' representing multiple lower triangular
          matrices, with some useful methods.

        * New package vignette 'lmvnorm_src' describing these new
          features.

        * 'pmvnorm', 'qmvnorm', 'pmvt', and 'qmvt' gain a 'seed'
          argument.

        * Regression tests were improved.

        * Internal standardization is described better in the docs,
          suggested by Chris Wymant.

        * New 'NEWS' file, the old file containing information up to
          version 1.1-3 is available as 'NEWS.old'.


To generate a diff of this commit:
cvs rdiff -u -r1.20 -r1.21 pkgsrc/math/R-mvtnorm/Makefile
cvs rdiff -u -r1.14 -r1.15 pkgsrc/math/R-mvtnorm/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/math/R-mvtnorm/Makefile
diff -u pkgsrc/math/R-mvtnorm/Makefile:1.20 pkgsrc/math/R-mvtnorm/Makefile:1.21
--- pkgsrc/math/R-mvtnorm/Makefile:1.20 Sun May 22 12:35:27 2022
+++ pkgsrc/math/R-mvtnorm/Makefile      Sun Jun 11 03:47:33 2023
@@ -1,12 +1,14 @@
-# $NetBSD: Makefile,v 1.20 2022/05/22 12:35:27 mef Exp $
+# $NetBSD: Makefile,v 1.21 2023/06/11 03:47:33 mef Exp $
 
 R_PKGNAME=     mvtnorm
-R_PKGVER=      1.1-3
+R_PKGVER=      1.2-2
 
 MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
 COMMENT=       Multivariate normal and t distributions
 LICENSE=       gnu-gpl-v2
 
+# Package suggested but not available: 'qrng'
+
 USE_LANGUAGES= c fortran
 
 .include "../../math/R/Makefile.extension"

Index: pkgsrc/math/R-mvtnorm/distinfo
diff -u pkgsrc/math/R-mvtnorm/distinfo:1.14 pkgsrc/math/R-mvtnorm/distinfo:1.15
--- pkgsrc/math/R-mvtnorm/distinfo:1.14 Sun May 22 12:35:27 2022
+++ pkgsrc/math/R-mvtnorm/distinfo      Sun Jun 11 03:47:33 2023
@@ -1,5 +1,5 @@
-$NetBSD: distinfo,v 1.14 2022/05/22 12:35:27 mef Exp $
+$NetBSD: distinfo,v 1.15 2023/06/11 03:47:33 mef Exp $
 
-BLAKE2s (R/mvtnorm_1.1-3.tar.gz) = 8e257f54c8fd070eed8a8a580fac0bd734969d3a3b1a7cc3602cc934acba5067
-SHA512 (R/mvtnorm_1.1-3.tar.gz) = aa6fabb25354607d1919f1f32a618f7004ce4ecea9bd1cdb7a7c9b5f0deb9ceba10c24d43c8cf670d93d61a0733b97b4cfe4e60d67743c8ae42c671aab9bded8
-Size (R/mvtnorm_1.1-3.tar.gz) = 166421 bytes
+BLAKE2s (R/mvtnorm_1.2-2.tar.gz) = a37b33f310dabe8de280eccb5ec0eb7ea621827cc684687ff74dd0698659ce7f
+SHA512 (R/mvtnorm_1.2-2.tar.gz) = c8ddc600b17da56077ef31a413f8ec5ff7c4352a0ddbdeacdb2d88b90a0bdb607c3341b2b13e82cfb7b63e6611d940826c7f77f9528e8c71fb521a69fd1cab86
+Size (R/mvtnorm_1.2-2.tar.gz) = 662749 bytes