CVS commit: pkgsrc/biology

["Brook Milligan" <brook%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   brook
Date:           Mon Aug 10 18:18:46 UTC 2020

Modified Files:
        pkgsrc/biology: Makefile
Added Files:
        pkgsrc/biology/R-popbio: DESCR Makefile distinfo

Log Message:
biology/R-popbio: import R-popbio-2.7

Construct and analyze projection matrix models from a demography study
of marked individuals classified by age or stage. The package covers
methods described in Matrix Population Models by Caswell (2001) and
Quantitative Conservation Biology by Morris and Doak (2002).


To generate a diff of this commit:
cvs rdiff -u -r1.55 -r1.56 pkgsrc/biology/Makefile
cvs rdiff -u -r0 -r1.1 pkgsrc/biology/R-popbio/DESCR \
    pkgsrc/biology/R-popbio/Makefile pkgsrc/biology/R-popbio/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/Makefile
diff -u pkgsrc/biology/Makefile:1.55 pkgsrc/biology/Makefile:1.56
--- pkgsrc/biology/Makefile:1.55        Fri Aug  9 21:52:34 2019
+++ pkgsrc/biology/Makefile     Mon Aug 10 18:18:46 2020
@@ -1,8 +1,9 @@
-# $NetBSD: Makefile,v 1.55 2019/08/09 21:52:34 brook Exp $
+# $NetBSD: Makefile,v 1.56 2020/08/10 18:18:46 brook Exp $
 #
 
 COMMENT=       Software for the biological sciences
 
+SUBDIR+=       R-popbio
 SUBDIR+=       arka
 SUBDIR+=       azara
 SUBDIR+=       bcftools

Added files:

Index: pkgsrc/biology/R-popbio/DESCR
diff -u /dev/null pkgsrc/biology/R-popbio/DESCR:1.1
--- /dev/null   Mon Aug 10 18:18:46 2020
+++ pkgsrc/biology/R-popbio/DESCR       Mon Aug 10 18:18:46 2020
@@ -0,0 +1,4 @@
+Construct and analyze projection matrix models from a demography study
+of marked individuals classified by age or stage. The package covers
+methods described in Matrix Population Models by Caswell (2001) and
+Quantitative Conservation Biology by Morris and Doak (2002).
Index: pkgsrc/biology/R-popbio/Makefile
diff -u /dev/null pkgsrc/biology/R-popbio/Makefile:1.1
--- /dev/null   Mon Aug 10 18:18:46 2020
+++ pkgsrc/biology/R-popbio/Makefile    Mon Aug 10 18:18:46 2020
@@ -0,0 +1,14 @@
+# $NetBSD: Makefile,v 1.1 2020/08/10 18:18:46 brook Exp $
+
+R_PKGNAME=     popbio
+R_PKGVER=      2.7
+CATEGORIES=    biology
+
+MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
+COMMENT=       Construction and Analysis of Matrix Population Models
+LICENSE=       gnu-gpl-v3
+
+USE_LANGUAGES= # none
+
+.include "../../math/R/Makefile.extension"
+.include "../../mk/bsd.pkg.mk"
Index: pkgsrc/biology/R-popbio/distinfo
diff -u /dev/null pkgsrc/biology/R-popbio/distinfo:1.1
--- /dev/null   Mon Aug 10 18:18:46 2020
+++ pkgsrc/biology/R-popbio/distinfo    Mon Aug 10 18:18:46 2020
@@ -0,0 +1,6 @@
+$NetBSD: distinfo,v 1.1 2020/08/10 18:18:46 brook Exp $
+
+SHA1 (R/popbio_2.7.tar.gz) = e91f6a45f8369e57810487c146bae1f5419c25b0
+RMD160 (R/popbio_2.7.tar.gz) = 6c0bc74f790dceccdd9bac62053ba77c0da34249
+SHA512 (R/popbio_2.7.tar.gz) = fafc04b6bc7e605d31849b9bc4bafdf8f27290f04b15378cc10f6140d5add4c342de7d9869938295afe5d871803fc0f3909e7c36780f71eda284c91fb077f640
+Size (R/popbio_2.7.tar.gz) = 127044 bytes