CVS commit: pkgsrc/biology/htslib

["Jason Bacon" <bacon%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   bacon
Date:           Wed Jul 22 15:36:55 UTC 2020

Modified Files:
        pkgsrc/biology/htslib: Makefile buildlink3.mk

Log Message:
bioloty/htslib: Correct bl2 (ABI bump, not API)

Also add -if to autoreconf


To generate a diff of this commit:
cvs rdiff -u -r1.16 -r1.17 pkgsrc/biology/htslib/Makefile
cvs rdiff -u -r1.3 -r1.4 pkgsrc/biology/htslib/buildlink3.mk

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/biology/htslib/Makefile
diff -u pkgsrc/biology/htslib/Makefile:1.16 pkgsrc/biology/htslib/Makefile:1.17
--- pkgsrc/biology/htslib/Makefile:1.16 Wed Jul 22 14:50:14 2020
+++ pkgsrc/biology/htslib/Makefile      Wed Jul 22 15:36:55 2020
@@ -1,6 +1,7 @@
-# $NetBSD: Makefile,v 1.16 2020/07/22 14:50:14 bacon Exp $
+# $NetBSD: Makefile,v 1.17 2020/07/22 15:36:55 bacon Exp $
 
 DISTNAME=      htslib-1.10.2
+PKGREVISION=   1
 CATEGORIES=    biology
 MASTER_SITES=  ${MASTER_SITE_GITHUB:=samtools/}
 
@@ -24,7 +25,7 @@ PKGCONFIG_OVERRIDE=   htslib.pc.in
 TEST_TARGET=           test
 
 pre-configure:
-       cd ${WRKSRC} && autoreconf
+       cd ${WRKSRC} && autoreconf -if
 
 .include "../../archivers/bzip2/buildlink3.mk"
 .include "../../archivers/xz/buildlink3.mk"

Index: pkgsrc/biology/htslib/buildlink3.mk
diff -u pkgsrc/biology/htslib/buildlink3.mk:1.3 pkgsrc/biology/htslib/buildlink3.mk:1.4
--- pkgsrc/biology/htslib/buildlink3.mk:1.3     Wed Jul 22 14:50:14 2020
+++ pkgsrc/biology/htslib/buildlink3.mk Wed Jul 22 15:36:55 2020
@@ -1,11 +1,12 @@
-# $NetBSD: buildlink3.mk,v 1.3 2020/07/22 14:50:14 bacon Exp $
+# $NetBSD: buildlink3.mk,v 1.4 2020/07/22 15:36:55 bacon Exp $
 
 BUILDLINK_TREE+=       htslib
 
 .if !defined(HTSLIB_BUILDLINK3_MK)
 HTSLIB_BUILDLINK3_MK:=
 
-BUILDLINK_API_DEPENDS.htslib+= htslib>=1.10.2
+BUILDLINK_API_DEPENDS.htslib+= htslib>=1.8
+BUILDLINK_ABI_DEPENDS.htslib+= htslib>=1.10.2
 BUILDLINK_PKGSRCDIR.htslib?=   ../../biology/htslib
 
 .endif # HTSLIB_BUILDLINK3_MK