CVS commit: pkgsrc/parallel/parallel

To: pkgsrc-changes%NetBSD.org@localhost
Subject: CVS commit: pkgsrc/parallel/parallel
From: "Nia Alarie" <nia%netbsd.org@localhost>
Date: Tue, 19 May 2020 14:35:25 +0000

Module Name:    pkgsrc
Committed By:   nia
Date:           Tue May 19 14:35:25 UTC 2020

Modified Files:
        pkgsrc/parallel/parallel: Makefile PLIST distinfo

Log Message:
parallel: Update to 20200422
20200422

This release celebrates GNU Parallel's 10 years as a GNU tool:

> commit ed2dfb1043768154d4e7678e01e10287155fa834
> Author: Ole Tange <ole%tange.dk@localhost>
> Date:   Thu Apr 22 01:23:00 2010 +0200
>
>    Name change: Parallel is now GNU Parallel.
>    Basic structure for sshlogin and sshloginfile.

New in this release:

* parsort makes GNU sort run faster for files with more than 1M lines.

* Bug fixes and man page updates.

News about GNU Parallel:

* Several clusters have updated their documentation of GNU Parallel:
  https://www.grid5000.fr/w/GNU_Parallel
  https://research-it.berkeley.edu/virtual-training-running-jobs-parallel-savio
  http://www.hpc.lsu.edu/training/archive/tutorials.php

* add_pho uses GNU Parallel: https://github.com/SeedlingsBabylab/add_pho

* GNU parallel使用笔记https://zhuanlan.zhihu.com/p/37340011

* Virtual Workshop: Running Jobs in Parallel on Savio
  https://ais.berkeley.edu/events/virtual-workshop-running-jobs-parallel-savio/2020-04-20

* Free Concurrency with GNU Parallel
  https://phili.pe/posts/free-concurrency-with-gnu-parallel/

20200322

* Bug fixes and man page updates.

News about GNU Parallel:

* The GNU Parallel course in Copenhagen is cancelled
  https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-med-ole-tange/

* The GNU Parallel course in Århus is cancelled
  https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-og-parallelisering-i-unix-shellen/

* The 10 year anniversary may be cancelled, see
  https://www.gnu.org/software/parallel/10-years-anniversary.html

* Running shell commands in parallel, via GNU Parallel
  https://dev.to/saveriomiroddi/running-shell-commands-in-parallel-via-gnu-parallel-3a72

* Faster nmap scanning with the help of GNU parallel
  https://badshah.io/experiment/faster-nmap-scanning-with-the-help-of-gnu-parallel/

20200222

* Bug fixes and man page updates.

20200122

* --blocktimeout dur - Time out for reading block when using
  --pipe. If it takes longer than dur to read a full block, use the
  partial block read so far.

* Bug fixes and man page updates.

News about GNU Parallel:

* GNU Parallel course in Copenhagen
  https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-med-ole-tange/

* GNU Parallel course in Århus
  https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-og-parallelisering-i-unix-shellen/

* GNU Parallel pour accélérer vos process sous Linux
  https://www.yvonh.com/gnu-parallel-pour-accelerer-vos-process-sous-linux/

* How to copy a file to multiple directories in Linux
  https://net2.com/how-to-copy-a-file-to-multiple-directories-in-linux/

* Running linux commands in parallel https://dev.to/voyeg3r/runing-linux-commands-in-parallel-4ff8

20191222

* GNU Parallel course in Copenhagen
  https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-med-ole-tange/

* GNU Parallel course in Århus
  https://www.prosa.dk/nc/arrangementer/arrangement/gnu-parallel-og-parallelisering-i-unix-shellen/

* GNU Parallel is used in
  https://github.com/JeffersonLab/rfw_tsf_extractor

* Bug fixes and man page updates.

20191122

* GNU Parallel was presented at Driving IT. Slides:
  cloud.prosa.dk/s/drivingit

* Restarting supervisord processes in parallel
  https://blog.naderman.de/2019/11/14/restarting-supervisord-processes-in-parallel/

* Using GNU Parallel to Create Archives Faster
  https://www.reddit.com/r/DataHoarder/comments/dsgmhc/parallel_archiving_techniques/

* Bug fixes and man page updates.

20191022

* --tee will use --output-error=warn-nopipe if supported by tee.

* GNU Parallel will be presented at Driving IT 2019:
  https://ida.dk/arrangementer-og-kurser/konferencer/driving-it/tools

* UMN Duluth: Job parallelization with task arrays and GNU parallel
  https://www.msi.umn.edu/tutorials/umn-duluth-job-parallelization-task-arrays-and-gnu-parallel

* Genome updater uses GNU Parallel
  https://github.com/pirovc/genome_updater

* Using GNU-Parallel for bioinformatics
  https://www.danielecook.com/using-gnu-parallel-for-bioinformatics/

* Speeding up PostgreSQL ETL pipeline with the help of GODS
  https://cfengine.com/company/blog-detail/speeding-up-postgresql-etl-pipeline-with-the-help-of-gods/

* Runing linux commands in parallel
  https://dev.to/voyeg3r/runing-linux-commands-in-parallel-4ff8

* Research Computing University of Colorado Boulder contains an intro
  to GNU Parallel
  https://readthedocs.org/projects/curc/downloads/pdf/latest/

* 如何使用Parallel在Shell中并行执行命令
  https://www.myfreax.com/gnu-parallel/

* 如何测试 Amazon Elastic File System
  https://aws.amazon.com/cn/blogs/china/how-to-test-drive-amazon-elastic-file-system/

* Bug fixes and man page updates.

20190922

* --nice is now inherited by the nice level that GNU Parallel is
  started at. So 'nice -n10 parallel' will also cause remote jobs to
  be run at nice level 10.

* --delay is now accurate to within 10 ms

* GNU Parallel will be presented at Driving IT 2019:
  https://ida.dk/arrangementer-og-kurser/konferencer/driving-it/tools

* Greenland Ice Sheet solid ice discharge from 1986 through 2017
  https://www.earth-syst-sci-data.net/11/769/2019/essd-11-769-2019.pdf

* App Center Cloud Build Machines > Installed Software > Utilities
  https://docs.microsoft.com/en-us/appcenter/build/software

* Curryfinger - SNI & Host header spoofing utility
  https://dualuse.io/blog/curryfinger/

* Hyak parallel-sql
  https://wiki.cac.washington.edu/display/hyakusers/Hyak+parallel-sql

* A meditation on analysing data with Perl in parallel using GNU Parallel
  https://www.reddit.com/r/perl/comments/cyo2qc/a_meditation_on_analysing_data_with_perl_in/

* Accélérer ses tâches avec GNU Parallel et les lots de tâches (UL)
  https://www.eventbrite.ca/e/inscription-accelerer-ses-taches-avec-gnu-parallel-et-les-lots-de-taches-ul-71412840729

* RMACC Summit GNU Parallel
  https://curc.readthedocs.io/en/latest/software/GNUParallel.html

* Introducing Parallel into Shell
  https://petelawson.com/post/parallel-in-shell/

* Linux Productivity Tools
  https://www.usenix.org/conference/lisa19/presentation/maheshwari

* Gnu/parallel + Nfs 实现共享文件网络的并发计算等操作
  http://atomicer.cn/2018/01/18/gnu-parallel-nfs-%E5%AE%9E%E7%8E%B0%E5%85%B1%E4%BA%AB%E6%96%87%E4%BB%B6%E7%BD%91%E7%BB%9C%E7%9A%84%E5%B9%B6%E5%8F%91%E8%AE%A1%E7%AE%97%E7%AD%89%E6%93%8D%E4%BD%9C/#more

* Bug fixes and man page updates.


To generate a diff of this commit:
cvs rdiff -u -r1.16 -r1.17 pkgsrc/parallel/parallel/Makefile
cvs rdiff -u -r1.4 -r1.5 pkgsrc/parallel/parallel/PLIST
cvs rdiff -u -r1.7 -r1.8 pkgsrc/parallel/parallel/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/parallel/parallel/Makefile
diff -u pkgsrc/parallel/parallel/Makefile:1.16 pkgsrc/parallel/parallel/Makefile:1.17
--- pkgsrc/parallel/parallel/Makefile:1.16      Sat Jan 18 23:33:25 2020
+++ pkgsrc/parallel/parallel/Makefile   Tue May 19 14:35:25 2020
@@ -1,7 +1,7 @@
-# $NetBSD: Makefile,v 1.16 2020/01/18 23:33:25 rillig Exp $
+# $NetBSD: Makefile,v 1.17 2020/05/19 14:35:25 nia Exp $
 #
 
-DISTNAME=      parallel-20190922
+DISTNAME=      parallel-20200422
 CATEGORIES=    parallel
 MASTER_SITES=  ${MASTER_SITE_GNU:=parallel/}
 EXTRACT_SUFX=  .tar.bz2
@@ -13,7 +13,8 @@ LICENSE=      gnu-gpl-v3
 
 USE_TOOLS+=    perl:run pod2man pod2html
 
-REPLACE_PERL+= src/parallel src/niceload src/sem src/sem.pod src/sql src/parcat
+REPLACE_PERL+= src/parallel src/niceload src/sem src/sem.pod
+REPLACE_PERL+= src/sql src/parcat src/parsort
 REPLACE_SH+=   src/env_parallel src/parset
 
 GNU_CONFIGURE= yes

Index: pkgsrc/parallel/parallel/PLIST
diff -u pkgsrc/parallel/parallel/PLIST:1.4 pkgsrc/parallel/parallel/PLIST:1.5
--- pkgsrc/parallel/parallel/PLIST:1.4  Thu Oct 31 22:57:37 2019
+++ pkgsrc/parallel/parallel/PLIST      Tue May 19 14:35:25 2020
@@ -1,4 +1,4 @@
-@comment $NetBSD: PLIST,v 1.4 2019/10/31 22:57:37 mef Exp $
+@comment $NetBSD: PLIST,v 1.5 2020/05/19 14:35:25 nia Exp $
 bin/env_parallel
 bin/env_parallel.ash
 bin/env_parallel.bash
@@ -15,6 +15,7 @@ bin/niceload
 bin/parallel
 bin/parcat
 bin/parset
+bin/parsort
 bin/sem
 bin/sql
 man/man1/env_parallel.1
@@ -22,6 +23,7 @@ man/man1/niceload.1
 man/man1/parallel.1
 man/man1/parcat.1
 man/man1/parset.1
+man/man1/parsort.1
 man/man1/sem.1
 man/man1/sql.1
 man/man7/parallel_alternatives.7
@@ -46,7 +48,7 @@ share/doc/parallel/parallel_alternatives
 share/doc/parallel/parallel_book.html
 share/doc/parallel/parallel_book.pdf
 share/doc/parallel/parallel_book.texi
-share/doc/parallel/parallel_cheat.pdf
+share/doc/parallel/parallel_cheat_bw.pdf
 share/doc/parallel/parallel_design.html
 share/doc/parallel/parallel_design.pdf
 share/doc/parallel/parallel_design.texi
@@ -59,6 +61,9 @@ share/doc/parallel/parcat.texi
 share/doc/parallel/parset.html
 share/doc/parallel/parset.pdf
 share/doc/parallel/parset.texi
+share/doc/parallel/parsort.html
+share/doc/parallel/parsort.pdf
+share/doc/parallel/parsort.texi
 share/doc/parallel/sem.html
 share/doc/parallel/sem.pdf
 share/doc/parallel/sem.texi

Index: pkgsrc/parallel/parallel/distinfo
diff -u pkgsrc/parallel/parallel/distinfo:1.7 pkgsrc/parallel/parallel/distinfo:1.8
--- pkgsrc/parallel/parallel/distinfo:1.7       Thu Oct 31 22:57:37 2019
+++ pkgsrc/parallel/parallel/distinfo   Tue May 19 14:35:25 2020
@@ -1,6 +1,6 @@
-$NetBSD: distinfo,v 1.7 2019/10/31 22:57:37 mef Exp $
+$NetBSD: distinfo,v 1.8 2020/05/19 14:35:25 nia Exp $
 
-SHA1 (parallel-20190922.tar.bz2) = cb827e2e5a3ab4d8ad68a7fd316243d7bb8e53b6
-RMD160 (parallel-20190922.tar.bz2) = bff805076489cb2bbfb461bd18f1e3362e68dd0e
-SHA512 (parallel-20190922.tar.bz2) = 1ee07529653b739c7b3c0500eb3e5b4083f86d5be9f5440d91a869b1b72d05b2905b52196e04e366b12d3e6b41609ff8d8cb3700e30a60c6faf0b2de2f2e16d8
-Size (parallel-20190922.tar.bz2) = 2075238 bytes
+SHA1 (parallel-20200422.tar.bz2) = bb68bb4bf87d20fd7a990c4b4e7f218d218cfd5d
+RMD160 (parallel-20200422.tar.bz2) = e8fbc6709d26a809619416640c3bd2e815f7ac83
+SHA512 (parallel-20200422.tar.bz2) = 77d011a946496252b1974bd3cd32dd6a0e79c81613a8d1b372717c98230bbb0bd6775b67b220e838c9fe274367fe9b9d415e4060f72a8c810a7710405b18b634
+Size (parallel-20200422.tar.bz2) = 2089965 bytes

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