CVS commit: pkgsrc

["Brook Milligan" <brook%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   brook
Date:           Fri Aug  9 15:43:48 UTC 2019

Modified Files:
        pkgsrc/doc: CHANGES-2019
        pkgsrc/math: Makefile
Added Files:
        pkgsrc/math/R-DEoptimR: DESCR Makefile distinfo

Log Message:
R-DEoptimR: initial commit

Differential Evolution (DE) stochastic algorithms for global
optimization of problems with and without constraints. The aim is to
curate a collection of its state-of-the-art variants that (1) do not
sacrifice simplicity of design, (2) are essentially tuning-free, and
(3) can be efficiently implemented directly in the R language.
Currently, it only provides an implementation of the 'jDE' algorithm
by Brest et al. (2006) <doi:10.1109/TEVC.2006.872133>.


To generate a diff of this commit:
cvs rdiff -u -r1.3325 -r1.3326 pkgsrc/doc/CHANGES-2019
cvs rdiff -u -r1.427 -r1.428 pkgsrc/math/Makefile
cvs rdiff -u -r0 -r1.1 pkgsrc/math/R-DEoptimR/DESCR \
    pkgsrc/math/R-DEoptimR/Makefile pkgsrc/math/R-DEoptimR/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/doc/CHANGES-2019
diff -u pkgsrc/doc/CHANGES-2019:1.3325 pkgsrc/doc/CHANGES-2019:1.3326
--- pkgsrc/doc/CHANGES-2019:1.3325      Fri Aug  9 15:42:02 2019
+++ pkgsrc/doc/CHANGES-2019     Fri Aug  9 15:43:47 2019
@@ -1,4 +1,4 @@
-$NetBSD: CHANGES-2019,v 1.3325 2019/08/09 15:42:02 brook Exp $
+$NetBSD: CHANGES-2019,v 1.3326 2019/08/09 15:43:47 brook Exp $
 
 Changes to the packages collection and infrastructure in 2019:
 
@@ -5449,3 +5449,4 @@ Changes to the packages collection and i
        Added graphics/R-latex2exp version 0.4.0 [brook 2019-08-09]
        Added finance/R-bayesm version 3.1.3 [brook 2019-08-09]
        Added math/R-energy version 1.7.6 [brook 2019-08-09]
+       Added math/R-DEoptimR version 1.0.8 [brook 2019-08-09]

Index: pkgsrc/math/Makefile
diff -u pkgsrc/math/Makefile:1.427 pkgsrc/math/Makefile:1.428
--- pkgsrc/math/Makefile:1.427  Fri Aug  9 15:42:02 2019
+++ pkgsrc/math/Makefile        Fri Aug  9 15:43:47 2019
@@ -1,4 +1,4 @@
-# $NetBSD: Makefile,v 1.427 2019/08/09 15:42:02 brook Exp $
+# $NetBSD: Makefile,v 1.428 2019/08/09 15:43:47 brook Exp $
 
 COMMENT=       Mathematics
 
@@ -6,6 +6,7 @@ SUBDIR+=        R
 SUBDIR+=       R-CGIwithR
 SUBDIR+=       R-DAAG
 SUBDIR+=       R-DBI
+SUBDIR+=       R-DEoptimR
 SUBDIR+=       R-FNN
 SUBDIR+=       R-Formula
 SUBDIR+=       R-GRASS

Added files:

Index: pkgsrc/math/R-DEoptimR/DESCR
diff -u /dev/null pkgsrc/math/R-DEoptimR/DESCR:1.1
--- /dev/null   Fri Aug  9 15:43:48 2019
+++ pkgsrc/math/R-DEoptimR/DESCR        Fri Aug  9 15:43:47 2019
@@ -0,0 +1,7 @@
+Differential Evolution (DE) stochastic algorithms for global
+optimization of problems with and without constraints. The aim is to
+curate a collection of its state-of-the-art variants that (1) do not
+sacrifice simplicity of design, (2) are essentially tuning-free, and
+(3) can be efficiently implemented directly in the R language.
+Currently, it only provides an implementation of the 'jDE' algorithm
+by Brest et al. (2006) <doi:10.1109/TEVC.2006.872133>.
Index: pkgsrc/math/R-DEoptimR/Makefile
diff -u /dev/null pkgsrc/math/R-DEoptimR/Makefile:1.1
--- /dev/null   Fri Aug  9 15:43:48 2019
+++ pkgsrc/math/R-DEoptimR/Makefile     Fri Aug  9 15:43:47 2019
@@ -0,0 +1,14 @@
+# $NetBSD: Makefile,v 1.1 2019/08/09 15:43:47 brook Exp $
+
+R_PKGNAME=     DEoptimR
+R_PKGVER=      1.0-8
+CATEGORIES=    math
+
+MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
+COMMENT=       Differential evolution optimization in pure R
+LICENSE=       gnu-gpl-v2 OR gnu-gpl-v3
+
+USE_LANGUAGES= # none
+
+.include "../../math/R/Makefile.extension"
+.include "../../mk/bsd.pkg.mk"
Index: pkgsrc/math/R-DEoptimR/distinfo
diff -u /dev/null pkgsrc/math/R-DEoptimR/distinfo:1.1
--- /dev/null   Fri Aug  9 15:43:48 2019
+++ pkgsrc/math/R-DEoptimR/distinfo     Fri Aug  9 15:43:48 2019
@@ -0,0 +1,6 @@
+$NetBSD: distinfo,v 1.1 2019/08/09 15:43:48 brook Exp $
+
+SHA1 (R/DEoptimR_1.0-8.tar.gz) = 3974d3642d4426fa2ee2093c13cae7aeba2dd70f
+RMD160 (R/DEoptimR_1.0-8.tar.gz) = 7d8672d59375f1fc3b758032bd2920287829d787
+SHA512 (R/DEoptimR_1.0-8.tar.gz) = d1ff9e4b12619df383cf01da48b084e5f88c5f33a7d943c1625c25345ecc6913a0879c54542d8507c7ec261a29bac1e18a913b9efb46775f259cf48481814515
+Size (R/DEoptimR_1.0-8.tar.gz) = 35401 bytes