CVS commit: pkgsrc

["Brook Milligan" <brook%netbsd.org@localhost>]

Module Name:    pkgsrc
Committed By:   brook
Date:           Wed Jul 31 19:31:13 UTC 2019

Modified Files:
        pkgsrc/doc: CHANGES-2019
        pkgsrc/math/R-genetics: Makefile distinfo

Log Message:
R-genetics: update to version 1.3.8.1.2.

Update to the canonical form of an R package and fix the LICENSE
field.


To generate a diff of this commit:
cvs rdiff -u -r1.3173 -r1.3174 pkgsrc/doc/CHANGES-2019
cvs rdiff -u -r1.13 -r1.14 pkgsrc/math/R-genetics/Makefile
cvs rdiff -u -r1.7 -r1.8 pkgsrc/math/R-genetics/distinfo

Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.

Modified files:

Index: pkgsrc/doc/CHANGES-2019
diff -u pkgsrc/doc/CHANGES-2019:1.3173 pkgsrc/doc/CHANGES-2019:1.3174
--- pkgsrc/doc/CHANGES-2019:1.3173      Wed Jul 31 19:30:51 2019
+++ pkgsrc/doc/CHANGES-2019     Wed Jul 31 19:31:13 2019
@@ -1,4 +1,4 @@
-$NetBSD: CHANGES-2019,v 1.3173 2019/07/31 19:30:51 plunky Exp $
+$NetBSD: CHANGES-2019,v 1.3174 2019/07/31 19:31:13 brook Exp $
 
 Changes to the packages collection and infrastructure in 2019:
 
@@ -5130,3 +5130,4 @@ Changes to the packages collection and i
        Updated math/R-forecast to 8.7 [brook 2019-07-31]
        Updated math/R-gdata to 2.18.0 [brook 2019-07-31]
        Updated cad/qcad to 3.23.0.0 [plunky 2019-07-31]
+       Updated math/R-genetics to 1.3.8.1.2 [brook 2019-07-31]

Index: pkgsrc/math/R-genetics/Makefile
diff -u pkgsrc/math/R-genetics/Makefile:1.13 pkgsrc/math/R-genetics/Makefile:1.14
--- pkgsrc/math/R-genetics/Makefile:1.13        Wed Aug 22 09:45:35 2018
+++ pkgsrc/math/R-genetics/Makefile     Wed Jul 31 19:31:13 2019
@@ -1,23 +1,23 @@
-# $NetBSD: Makefile,v 1.13 2018/08/22 09:45:35 wiz Exp $
-#
+# $NetBSD: Makefile,v 1.14 2019/07/31 19:31:13 brook Exp $
 
-PKGREVISION=   2
-CATEGORIES=    math
+CATEGORIES=    math R
 
 MAINTAINER=    pkgsrc-users%NetBSD.org@localhost
 HOMEPAGE=      ${R_HOMEPAGE_BASE}/genetics/
 COMMENT=       Classes and methods for handling genetic data
-LICENSE=       gnu-gpl-v3
+LICENSE=       gnu-gpl-v1 OR gnu-gpl-v2 OR gnu-gpl-v3
 
 USE_TOOLS+=    perl
 
 R_PKGNAME=     genetics
-R_PKGVER=      1.3.8.1
+R_PKGVER=      1.3.8.1.2
 
 DEPENDS+=      R-combinat>=0.0.8:../../math/R-combinat
-DEPENDS+=      R-gdata>=2.8.2:../../math/R-gdata
-DEPENDS+=      R-gtools>=2.6.2:../../math/R-gtools
-DEPENDS+=      R-mvtnorm>=0.9.9992:../../math/R-mvtnorm
+DEPENDS+=      R-gdata>=2.18.0:../../math/R-gdata
+DEPENDS+=      R-gtools>=3.5.0:../../math/R-gtools
+DEPENDS+=      R-mvtnorm>=1.0.8:../../math/R-mvtnorm
+
+USE_LANGUAGES= # none
 
 .include "../../math/R/Makefile.extension"
 .include "../../mk/bsd.pkg.mk"

Index: pkgsrc/math/R-genetics/distinfo
diff -u pkgsrc/math/R-genetics/distinfo:1.7 pkgsrc/math/R-genetics/distinfo:1.8
--- pkgsrc/math/R-genetics/distinfo:1.7 Sat Apr  9 13:34:16 2016
+++ pkgsrc/math/R-genetics/distinfo     Wed Jul 31 19:31:13 2019
@@ -1,6 +1,6 @@
-$NetBSD: distinfo,v 1.7 2016/04/09 13:34:16 wen Exp $
+$NetBSD: distinfo,v 1.8 2019/07/31 19:31:13 brook Exp $
 
-SHA1 (R/genetics_1.3.8.1.tar.gz) = 9ff973ff6e23b8607c11316e1a4934490d7ea546
-RMD160 (R/genetics_1.3.8.1.tar.gz) = 1cec60c9063f93e4da6b78f58f52b64cecddfaae
-SHA512 (R/genetics_1.3.8.1.tar.gz) = 2ff842fc40da0d8e1dd1aab4b5897d8406438c003b25ba9bc289d3720cf2e7a5dabf82c63172a24a150ebe96ccad9506ea25aac239c08c6ff7614885851bdfd7
-Size (R/genetics_1.3.8.1.tar.gz) = 199642 bytes
+SHA1 (R/genetics_1.3.8.1.2.tar.gz) = ef3c8c3ddf1c57929048415c29b2dbc18ee794c6
+RMD160 (R/genetics_1.3.8.1.2.tar.gz) = ee5c25fef7441aecafb650ff746a4a6d24dfb789
+SHA512 (R/genetics_1.3.8.1.2.tar.gz) = 3ec4237f153b6f36fd1778b073e3a2f97410716a0b8ac1a951a74a1994061ef6b8c4844594c8837c6628a017e0d33204307fbf630a4db91738615be577d01aac
+Size (R/genetics_1.3.8.1.2.tar.gz) = 199755 bytes