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CVS commit: pkgsrc/biology/ncbi-blast+
Module Name: pkgsrc
Committed By: bacon
Date: Fri Jun 28 20:17:35 UTC 2019
Modified Files:
pkgsrc/biology/ncbi-blast+: Makefile
Log Message:
biology/ncbi-blast+: Unbreak configure
Configure script does not support --enable-option-checking
Also add perl to USE_TOOLS
To generate a diff of this commit:
cvs rdiff -u -r1.8 -r1.9 pkgsrc/biology/ncbi-blast+/Makefile
Please note that diffs are not public domain; they are subject to the
copyright notices on the relevant files.
Modified files:
Index: pkgsrc/biology/ncbi-blast+/Makefile
diff -u pkgsrc/biology/ncbi-blast+/Makefile:1.8 pkgsrc/biology/ncbi-blast+/Makefile:1.9
--- pkgsrc/biology/ncbi-blast+/Makefile:1.8 Thu Apr 25 07:32:37 2019
+++ pkgsrc/biology/ncbi-blast+/Makefile Fri Jun 28 20:17:35 2019
@@ -1,8 +1,8 @@
-# $NetBSD: Makefile,v 1.8 2019/04/25 07:32:37 maya Exp $
+# $NetBSD: Makefile,v 1.9 2019/06/28 20:17:35 bacon Exp $
DISTNAME= ncbi-blast-2.8.1+-src
PKGNAME= ${DISTNAME:S/+-src//:S/blast/blast+/}
-PKGREVISION= 2
+PKGREVISION= 3
CATEGORIES= biology
MASTER_SITES= https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/LATEST/ \
https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/${PKGVERSION_NOREV}/
@@ -21,9 +21,10 @@ SUBST_SED.configure+= -e '/--infodir=DIR
SUBST_SED.configure+= -e '/--mandir=DIR/d'
SUBST_FILES.configure+= ${WRKSRC}/src/build-system/configure
-USE_TOOLS+= bash gmake
+USE_TOOLS+= bash gmake perl
USE_LANGUAGES= c c++
GNU_CONFIGURE= yes
+GNU_CONFIGURE_STRICT= no # doesn't know --enable-option-checking
REPLACE_BASH= scripts/common/impl/define_random_macros.sh
REPLACE_BASH+= src/app/blast/get_species_taxids.sh
REPLACE_PERL= src/app/blast/legacy_blast.pl src/app/blast/update_blastdb.pl
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